RNA–Protein interactions for RNA: ENST00000308448.11

ATAD1-201, Transcript of ATPase family, AAA domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ATAD1, Length 4,640 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD1-201ENST00000308448 NISCHQ9Y2I1 1504 aa18.62■□□□□ 0.57
ATAD1-201ENST00000308448 DCAF8L2P0C7V8 631 aa18.24■□□□□ 0.51
ATAD1-201ENST00000308448 SHROOM4Q9ULL8 1493 aa16.99■□□□□ 0.31
ATAD1-201ENST00000308448 SUPT5HO00267 1087 aaKnown RBP16.8■□□□□ 0.28
ATAD1-201ENST00000308448 ABCC9O60706 1549 aa16.37■□□□□ 0.21
ATAD1-201ENST00000308448 EHMT2Q96KQ7 1210 aa16.06■□□□□ 0.16
ATAD1-201ENST00000308448 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
ATAD1-201ENST00000308448 FAM9AQ8IZU1 332 aaPredicted RBP15.79■□□□□ 0.12
ATAD1-201ENST00000308448 TRIM41Q8WV44 630 aa15.58■□□□□ 0.08
ATAD1-201ENST00000308448 RANGAP1P46060 587 aaPredicted RBP15.56■□□□□ 0.08
ATAD1-201ENST00000308448 CCDC180Q9P1Z9 1646 aa15.55■□□□□ 0.08
ATAD1-201ENST00000308448 ZCCHC6Q5VYS8 1495 aaKnown RBP15.39■□□□□ 0.05
ATAD1-201ENST00000308448 APLP2Q06481 763 aa15.37■□□□□ 0.05
ATAD1-201ENST00000308448 SCRIBQ14160 1630 aa15.36■□□□□ 0.05
ATAD1-201ENST00000308448 TTBK1Q5TCY1 1321 aaPredicted RBP15.34■□□□□ 0.05
ATAD1-201ENST00000308448 UBTFP17480 764 aaKnown RBP15.31■□□□□ 0.04
ATAD1-201ENST00000308448 ATP1B4Q9UN42 357 aaPredicted RBP15.31■□□□□ 0.04
ATAD1-201ENST00000308448 RB1CC1Q8TDY2 1594 aa15.23■□□□□ 0.03
ATAD1-201ENST00000308448 NACADO15069 1562 aa15.09■□□□□ 0.01
ATAD1-201ENST00000308448 CHIC1Q5VXU3 224 aa15.04■□□□□ -0
ATAD1-201ENST00000308448 FBLN2P98095 1184 aa14.99□□□□□ -0.01
ATAD1-201ENST00000308448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.97□□□□□ -0.01
ATAD1-201ENST00000308448 HNRNPUL2Q1KMD3 747 aaKnown RBP14.97□□□□□ -0.01
ATAD1-201ENST00000308448 PPARGC1BQ86YN6 1023 aaKnown RBP14.93□□□□□ -0.02
ATAD1-201ENST00000308448 LOC105371045A0A1W2PR82 267 aa14.93□□□□□ -0.02
ATAD1-201ENST00000308448 PELP1Q8IZL8 1130 aaKnown RBP14.83□□□□□ -0.04
ATAD1-201ENST00000308448 PCGF6Q9BYE7 350 aa14.8□□□□□ -0.04
ATAD1-201ENST00000308448 DCAF1Q9Y4B6 1507 aa14.77□□□□□ -0.04
ATAD1-201ENST00000308448 MYT1LQ9UL68 1186 aa14.77□□□□□ -0.05
ATAD1-201ENST00000308448 CECR2Q9BXF3 1484 aa14.72□□□□□ -0.05
ATAD1-201ENST00000308448 RSF1Q96T23 1441 aaPredicted RBP14.71□□□□□ -0.06
ATAD1-201ENST00000308448 ITGAEP38570 1179 aa14.69□□□□□ -0.06
ATAD1-201ENST00000308448 BAZ1BQ9UIG0 1483 aaKnown RBP14.67□□□□□ -0.06
ATAD1-201ENST00000308448 P3H3Q8IVL6 736 aa14.63□□□□□ -0.07
ATAD1-201ENST00000308448 ARID3CA6NKF2 412 aa14.61□□□□□ -0.07
ATAD1-201ENST00000308448 CSRNP3Q8WYN3 585 aa14.59□□□□□ -0.07
ATAD1-201ENST00000308448 BAZ1AQ9NRL2 1556 aaPredicted RBP14.56□□□□□ -0.08
ATAD1-201ENST00000308448 CCER1Q8TC90 406 aaPredicted RBP14.53□□□□□ -0.08
ATAD1-201ENST00000308448 ERCC6Q03468 1493 aa14.52□□□□□ -0.08
ATAD1-201ENST00000308448 MYO15BQ96JP2 1530 aa14.52□□□□□ -0.09
ATAD1-201ENST00000308448 CHMP7Q8WUX9 453 aaPredicted RBP14.48□□□□□ -0.09
ATAD1-201ENST00000308448 MROH2BQ7Z745 1585 aa14.46□□□□□ -0.09
ATAD1-201ENST00000308448 FAM50AQ14320 339 aaKnown RBP14.41□□□□□ -0.1
ATAD1-201ENST00000308448 ZEB1P37275 1124 aaPredicted RBP14.35□□□□□ -0.11
ATAD1-201ENST00000308448 TRIM26Q12899 539 aaPredicted RBP14.33□□□□□ -0.12
ATAD1-201ENST00000308448 NPM1P06748 294 aaKnown RBP eCLIP14.33□□□□□ -0.12
ATAD1-201ENST00000308448 WRNQ14191 1432 aaPredicted RBP eCLIP14.33□□□□□ -0.12
ATAD1-201ENST00000308448 SMARCA2P51531 1590 aa14.32□□□□□ -0.12
ATAD1-201ENST00000308448 ZNF777Q9ULD5 760 aaPredicted RBP14.28□□□□□ -0.12
ATAD1-201ENST00000308448 ATAD2BQ9ULI0 1458 aa14.27□□□□□ -0.12
ATAD1-201ENST00000308448 CCDC88BA6NC98 1476 aa14.26□□□□□ -0.13
ATAD1-201ENST00000308448 PDS5BQ9NTI5 1447 aa14.24□□□□□ -0.13
ATAD1-201ENST00000308448 CENPBP07199 599 aaPredicted RBP14.24□□□□□ -0.13
ATAD1-201ENST00000308448 CDK11AQ9UQ88 783 aaPredicted RBP14.23□□□□□ -0.13
ATAD1-201ENST00000308448 WIZO95785 1651 aa14.22□□□□□ -0.13
ATAD1-201ENST00000308448 TRIM52Q96A61 297 aa14.21□□□□□ -0.13
ATAD1-201ENST00000308448 CADPSQ9ULU8 1353 aa14.2□□□□□ -0.14
ATAD1-201ENST00000308448 SMARCA4P51532 1647 aa14.16□□□□□ -0.14
ATAD1-201ENST00000308448 DNAJC5BQ9UF47 199 aa14.16□□□□□ -0.14
ATAD1-201ENST00000308448 KIF27Q86VH2 1401 aa14.16□□□□□ -0.14
ATAD1-201ENST00000308448 TDRD9Q8NDG6 1382 aaKnown RBP14.14□□□□□ -0.15
ATAD1-201ENST00000308448 KCNH8Q96L42 1107 aa14.13□□□□□ -0.15
ATAD1-201ENST00000308448 POLR3GLQ9BT43 218 aa14.13□□□□□ -0.15
ATAD1-201ENST00000308448 EIF4G1Q04637 1599 aaKnown RBP14.12□□□□□ -0.15
ATAD1-201ENST00000308448 PLPPR3Q6T4P5 718 aa14.11□□□□□ -0.15
ATAD1-201ENST00000308448 CUX2O14529 1486 aa14.1□□□□□ -0.15
ATAD1-201ENST00000308448 TOP2AP11388 1531 aaKnown RBP14.09□□□□□ -0.15
ATAD1-201ENST00000308448 ERICH6Q7L0X2 663 aa14.09□□□□□ -0.15
ATAD1-201ENST00000308448 NEFLP07196 543 aa14.08□□□□□ -0.16
ATAD1-201ENST00000308448 SOGA1O94964 1423 aa14.07□□□□□ -0.16
ATAD1-201ENST00000308448 ABCC8Q09428 1581 aa14.05□□□□□ -0.16
ATAD1-201ENST00000308448 NEUROD1Q13562 356 aa14.02□□□□□ -0.16
ATAD1-201ENST00000308448 CNGB1Q14028 1251 aaPredicted RBP14.02□□□□□ -0.16
ATAD1-201ENST00000308448 CEP164Q9UPV0 1460 aa14.01□□□□□ -0.17
ATAD1-201ENST00000308448 CARMIL1Q5VZK9 1371 aa14.01□□□□□ -0.17
ATAD1-201ENST00000308448 CLIP1P30622 1438 aa14.01□□□□□ -0.17
ATAD1-201ENST00000308448 NCAPD3P42695 1498 aa14.01□□□□□ -0.17
ATAD1-201ENST00000308448 ESF1Q9H501 851 aaKnown RBP14.01□□□□□ -0.17
ATAD1-201ENST00000308448 EEA1Q15075 1411 aa14□□□□□ -0.17
ATAD1-201ENST00000308448 FANCD2Q9BXW9 1451 aa14□□□□□ -0.17
ATAD1-201ENST00000308448 PLEKHD1A6NEE1 506 aa13.99□□□□□ -0.17
ATAD1-201ENST00000308448 MTUS2Q5JR59 1369 aa13.99□□□□□ -0.17
ATAD1-201ENST00000308448 ZNF326Q5BKZ1 582 aaKnown RBP13.99□□□□□ -0.17
ATAD1-201ENST00000308448 CHIC2Q9UKJ5 165 aa13.99□□□□□ -0.17
ATAD1-201ENST00000308448 TRHP20396 242 aaPredicted RBP13.98□□□□□ -0.17
ATAD1-201ENST00000308448 CC2D2AQ9P2K1 1620 aa13.97□□□□□ -0.17
ATAD1-201ENST00000308448 SLC4A1APQ9BWU0 796 aaKnown RBP13.95□□□□□ -0.18
ATAD1-201ENST00000308448 GOLGA3Q08378 1498 aa13.95□□□□□ -0.18
ATAD1-201ENST00000308448 BCANQ96GW7 911 aa13.95□□□□□ -0.18
ATAD1-201ENST00000308448 BICRAQ9NZM4 1560 aa13.93□□□□□ -0.18
ATAD1-201ENST00000308448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.91□□□□□ -0.187e-7■■■□□ 14.6
ATAD1-201ENST00000308448 TSPY4P0CV99 314 aa13.91□□□□□ -0.18
ATAD1-201ENST00000308448 TSPY10P0CW01 314 aa13.91□□□□□ -0.18
ATAD1-201ENST00000308448 NESP48681 1621 aa13.9□□□□□ -0.18
ATAD1-201ENST00000308448 CEP162Q5TB80 1403 aa13.88□□□□□ -0.19
ATAD1-201ENST00000308448 CHGAP10645 457 aaKnown RBP13.88□□□□□ -0.19
ATAD1-201ENST00000308448 YTHDC1Q96MU7 727 aaKnown RBP13.84□□□□□ -0.19
ATAD1-201ENST00000308448 STAG3Q9UJ98 1225 aa13.84□□□□□ -0.19
ATAD1-201ENST00000308448 CFDP1Q9UEE9 299 aaPredicted RBP13.82□□□□□ -0.2
ATAD1-201ENST00000308448 TNIKQ9UKE5 1360 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms