RNA–Protein interactions for RNA: ENST00000302851.7

ZNF561-201, Transcript of zinc finger protein 561, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF561, Length 4,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-201ENST00000302851 NISCHQ9Y2I1 1504 aa19.47■□□□□ 0.71
ZNF561-201ENST00000302851 DCAF8L2P0C7V8 631 aa18.39■□□□□ 0.53
ZNF561-201ENST00000302851 ABCC9O60706 1549 aa16.9■□□□□ 0.3
ZNF561-201ENST00000302851 SHROOM4Q9ULL8 1493 aa16.86■□□□□ 0.29
ZNF561-201ENST00000302851 CCDC180Q9P1Z9 1646 aa16.75■□□□□ 0.27
ZNF561-201ENST00000302851 SUPT5HO00267 1087 aaKnown RBP16.73■□□□□ 0.27
ZNF561-201ENST00000302851 FAM9AQ8IZU1 332 aaPredicted RBP16.48■□□□□ 0.23
ZNF561-201ENST00000302851 RB1CC1Q8TDY2 1594 aa16.27■□□□□ 0.19
ZNF561-201ENST00000302851 PABPN1Q86U42 306 aaKnown RBP eCLIP16.26■□□□□ 0.19
ZNF561-201ENST00000302851 NACADO15069 1562 aa16.17■□□□□ 0.18
ZNF561-201ENST00000302851 ZCCHC6Q5VYS8 1495 aaKnown RBP16.1■□□□□ 0.17
ZNF561-201ENST00000302851 SCRIBQ14160 1630 aa15.91■□□□□ 0.14
ZNF561-201ENST00000302851 APLP2Q06481 763 aa15.91■□□□□ 0.14
ZNF561-201ENST00000302851 DCAF1Q9Y4B6 1507 aa15.88■□□□□ 0.13
ZNF561-201ENST00000302851 TRIM41Q8WV44 630 aa15.86■□□□□ 0.13
ZNF561-201ENST00000302851 MYO15BQ96JP2 1530 aa15.77■□□□□ 0.11
ZNF561-201ENST00000302851 UBTFP17480 764 aaKnown RBP15.56■□□□□ 0.08
ZNF561-201ENST00000302851 EHMT2Q96KQ7 1210 aa15.53■□□□□ 0.08
ZNF561-201ENST00000302851 ATP1B4Q9UN42 357 aaPredicted RBP15.44■□□□□ 0.06
ZNF561-201ENST00000302851 BAZ1AQ9NRL2 1556 aaPredicted RBP15.38■□□□□ 0.05
ZNF561-201ENST00000302851 BAZ1BQ9UIG0 1483 aaKnown RBP15.38■□□□□ 0.05
ZNF561-201ENST00000302851 RANGAP1P46060 587 aaPredicted RBP15.35■□□□□ 0.05
ZNF561-201ENST00000302851 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.29■□□□□ 0.04
ZNF561-201ENST00000302851 FBLN2P98095 1184 aa15.29■□□□□ 0.04
ZNF561-201ENST00000302851 HNRNPUL2Q1KMD3 747 aaKnown RBP15.29■□□□□ 0.04
ZNF561-201ENST00000302851 SMARCA2P51531 1590 aa15.27■□□□□ 0.03
ZNF561-201ENST00000302851 ERCC6Q03468 1493 aa15.25■□□□□ 0.03
ZNF561-201ENST00000302851 CECR2Q9BXF3 1484 aa15.15■□□□□ 0.02
ZNF561-201ENST00000302851 TTBK1Q5TCY1 1321 aaPredicted RBP15.14■□□□□ 0.01
ZNF561-201ENST00000302851 MYT1LQ9UL68 1186 aa15.14■□□□□ 0.01
ZNF561-201ENST00000302851 RSF1Q96T23 1441 aaPredicted RBP15.14■□□□□ 0.01
ZNF561-201ENST00000302851 PDS5BQ9NTI5 1447 aa15.13■□□□□ 0.01
ZNF561-201ENST00000302851 NPM1P06748 294 aaKnown RBP eCLIP15.11■□□□□ 0.01
ZNF561-201ENST00000302851 CHIC1Q5VXU3 224 aa15.1■□□□□ 0.01
ZNF561-201ENST00000302851 CHMP7Q8WUX9 453 aaPredicted RBP15.04■□□□□ -0
ZNF561-201ENST00000302851 CDK11AQ9UQ88 783 aaPredicted RBP15□□□□□ -0.01
ZNF561-201ENST00000302851 CSRNP3Q8WYN3 585 aa14.99□□□□□ -0.01
ZNF561-201ENST00000302851 ATAD2BQ9ULI0 1458 aa14.93□□□□□ -0.02
ZNF561-201ENST00000302851 CADPSQ9ULU8 1353 aa14.9□□□□□ -0.02
ZNF561-201ENST00000302851 EEA1Q15075 1411 aa14.86□□□□□ -0.03
ZNF561-201ENST00000302851 MROH2BQ7Z745 1585 aa14.86□□□□□ -0.03
ZNF561-201ENST00000302851 WRNQ14191 1432 aaPredicted RBP eCLIP14.86□□□□□ -0.03
ZNF561-201ENST00000302851 NCAPD3P42695 1498 aa14.85□□□□□ -0.03
ZNF561-201ENST00000302851 SMARCA4P51532 1647 aa14.85□□□□□ -0.03
ZNF561-201ENST00000302851 EIF4G1Q04637 1599 aaKnown RBP14.85□□□□□ -0.03
ZNF561-201ENST00000302851 ABCC8Q09428 1581 aa14.83□□□□□ -0.04
ZNF561-201ENST00000302851 KIF27Q86VH2 1401 aa14.82□□□□□ -0.04
ZNF561-201ENST00000302851 TOP2AP11388 1531 aaKnown RBP14.81□□□□□ -0.04
ZNF561-201ENST00000302851 CEP164Q9UPV0 1460 aa14.76□□□□□ -0.05
ZNF561-201ENST00000302851 CCDC88BA6NC98 1476 aa14.71□□□□□ -0.05
ZNF561-201ENST00000302851 ESF1Q9H501 851 aaKnown RBP14.69□□□□□ -0.06
ZNF561-201ENST00000302851 CC2D2AQ9P2K1 1620 aa14.65□□□□□ -0.06
ZNF561-201ENST00000302851 SOGA1O94964 1423 aa14.65□□□□□ -0.06
ZNF561-201ENST00000302851 P3H3Q8IVL6 736 aa14.65□□□□□ -0.06
ZNF561-201ENST00000302851 HMGXB3Q12766 1538 aa14.64□□□□□ -0.07
ZNF561-201ENST00000302851 ZEB1P37275 1124 aaPredicted RBP14.64□□□□□ -0.07
ZNF561-201ENST00000302851 FANCD2Q9BXW9 1451 aa14.63□□□□□ -0.07
ZNF561-201ENST00000302851 LOC105371045A0A1W2PR82 267 aa14.61□□□□□ -0.07
ZNF561-201ENST00000302851 FAM50AQ14320 339 aaKnown RBP14.59□□□□□ -0.07
ZNF561-201ENST00000302851 ITGAEP38570 1179 aa14.59□□□□□ -0.07
ZNF561-201ENST00000302851 CUX2O14529 1486 aa14.59□□□□□ -0.07
ZNF561-201ENST00000302851 CCER1Q8TC90 406 aaPredicted RBP14.58□□□□□ -0.07
ZNF561-201ENST00000302851 WIZO95785 1651 aa14.58□□□□□ -0.08
ZNF561-201ENST00000302851 PCGF6Q9BYE7 350 aa14.58□□□□□ -0.08
ZNF561-201ENST00000302851 PLEKHD1A6NEE1 506 aa14.57□□□□□ -0.08
ZNF561-201ENST00000302851 CARMIL2Q6F5E8 1435 aa14.57□□□□□ -0.08
ZNF561-201ENST00000302851 BICRAQ9NZM4 1560 aa14.56□□□□□ -0.08
ZNF561-201ENST00000302851 OSCARQ8IYS5 282 aa14.53□□□□□ -0.08
ZNF561-201ENST00000302851 CARMIL1Q5VZK9 1371 aa14.53□□□□□ -0.08
ZNF561-201ENST00000302851 TRIM26Q12899 539 aaPredicted RBP14.51□□□□□ -0.09
ZNF561-201ENST00000302851 GOLGA3Q08378 1498 aa14.51□□□□□ -0.09
ZNF561-201ENST00000302851 ACIN1Q9UKV3 1341 aaKnown RBP14.5□□□□□ -0.09
ZNF561-201ENST00000302851 ZNF777Q9ULD5 760 aaPredicted RBP14.48□□□□□ -0.09
ZNF561-201ENST00000302851 ARID3CA6NKF2 412 aa14.48□□□□□ -0.09
ZNF561-201ENST00000302851 TRIM52Q96A61 297 aa14.46□□□□□ -0.09
ZNF561-201ENST00000302851 TDRD9Q8NDG6 1382 aaKnown RBP14.46□□□□□ -0.09
ZNF561-201ENST00000302851 TSPY4P0CV99 314 aa14.45□□□□□ -0.1
ZNF561-201ENST00000302851 TSPY10P0CW01 314 aa14.45□□□□□ -0.1
ZNF561-201ENST00000302851 MRC2Q9UBG0 1479 aa14.45□□□□□ -0.1
ZNF561-201ENST00000302851 MTUS2Q5JR59 1369 aa14.45□□□□□ -0.1
ZNF561-201ENST00000302851 TRHP20396 242 aaPredicted RBP14.44□□□□□ -0.1
ZNF561-201ENST00000302851 PPARGC1BQ86YN6 1023 aaKnown RBP14.42□□□□□ -0.1
ZNF561-201ENST00000302851 CFTRP13569 1480 aa14.41□□□□□ -0.1
ZNF561-201ENST00000302851 CLIP1P30622 1438 aa14.41□□□□□ -0.1
ZNF561-201ENST00000302851 LAMC3Q9Y6N6 1575 aa14.41□□□□□ -0.1
ZNF561-201ENST00000302851 FHAD1B1AJZ9 1412 aa14.38□□□□□ -0.11
ZNF561-201ENST00000302851 DNAJC5BQ9UF47 199 aa14.38□□□□□ -0.11
ZNF561-201ENST00000302851 KCNH8Q96L42 1107 aa14.37□□□□□ -0.11
ZNF561-201ENST00000302851 IFT140Q96RY7 1462 aa14.36□□□□□ -0.11
ZNF561-201ENST00000302851 STAG3Q9UJ98 1225 aa14.33□□□□□ -0.12
ZNF561-201ENST00000302851 TNIKQ9UKE5 1360 aa14.32□□□□□ -0.12
ZNF561-201ENST00000302851 BCANQ96GW7 911 aa14.31□□□□□ -0.12
ZNF561-201ENST00000302851 JPH4Q96JJ6 628 aa14.3□□□□□ -0.12
ZNF561-201ENST00000302851 GAPVD1Q14C86 1478 aa14.3□□□□□ -0.12
ZNF561-201ENST00000302851 RAPGEF2Q9Y4G8 1499 aa14.29□□□□□ -0.12
ZNF561-201ENST00000302851 UNC13AQ9UPW8 1703 aa14.28□□□□□ -0.12
ZNF561-201ENST00000302851 PEG3Q9GZU2 1588 aa14.28□□□□□ -0.12
ZNF561-201ENST00000302851 GRIN2BQ13224 1484 aa14.27□□□□□ -0.13
ZNF561-201ENST00000302851 FGD5Q6ZNL6 1462 aa14.27□□□□□ -0.13
ZNF561-201ENST00000302851 FMN1Q68DA7 1419 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms