RNA–Protein interactions for RNA: ENST00000289316.2

HIST1H2BD-201, Transcript of histone cluster 1 H2B family member d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIST1H2BD, Length 789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BD-201ENST00000289316 AEBP2Q6ZN18 517 aaPredicted RBP17.43■□□□□ 0.38
HIST1H2BD-201ENST00000289316 CHIC1Q5VXU3 224 aa16.57■□□□□ 0.24
HIST1H2BD-201ENST00000289316 SENP3Q9H4L4 574 aaPredicted RBP14.89□□□□□ -0.03
HIST1H2BD-201ENST00000289316 PHF23Q9BUL5 403 aaPredicted RBP14.68□□□□□ -0.06
HIST1H2BD-201ENST00000289316 FOXD1Q16676 465 aa13.87□□□□□ -0.19
HIST1H2BD-201ENST00000289316 PLPPR3Q6T4P5 718 aa13.24□□□□□ -0.29
HIST1H2BD-201ENST00000289316 MSH5O43196 834 aa13□□□□□ -0.33
HIST1H2BD-201ENST00000289316 PIAS4Q8N2W9 510 aaPredicted RBP12.98□□□□□ -0.33
HIST1H2BD-201ENST00000289316 PPP6R1Q9UPN7 881 aa12.94□□□□□ -0.34
HIST1H2BD-201ENST00000289316 ADRA2BP18089 450 aa12.92□□□□□ -0.34
HIST1H2BD-201ENST00000289316 NISCHQ9Y2I1 1504 aa12.83□□□□□ -0.36
HIST1H2BD-201ENST00000289316 DNAJC5BQ9UF47 199 aa12.69□□□□□ -0.38
HIST1H2BD-201ENST00000289316 POTEDQ86YR6 584 aa12.67□□□□□ -0.38
HIST1H2BD-201ENST00000289316 ABCC9O60706 1549 aa12.67□□□□□ -0.38
HIST1H2BD-201ENST00000289316 DNAJC5Q9H3Z4 198 aa12.29□□□□□ -0.44
HIST1H2BD-201ENST00000289316 MAPK8IP2Q13387 824 aaPredicted RBP11.85□□□□□ -0.51
HIST1H2BD-201ENST00000289316 SCAF1Q9H7N4 1312 aaKnown RBP11.84□□□□□ -0.51
HIST1H2BD-201ENST00000289316 DMRT2Q9Y5R5 561 aa11.8□□□□□ -0.52
HIST1H2BD-201ENST00000289316 CCDC180Q9P1Z9 1646 aa11.78□□□□□ -0.52
HIST1H2BD-201ENST00000289316 PABPN1Q86U42 306 aaKnown RBP eCLIP11.72□□□□□ -0.53
HIST1H2BD-201ENST00000289316 RB1CC1Q8TDY2 1594 aa11.67□□□□□ -0.54
HIST1H2BD-201ENST00000289316 PPP4R3CPQ6ZMV5 832 aa11.6□□□□□ -0.55
HIST1H2BD-201ENST00000289316 CECR2Q9BXF3 1484 aa11.51□□□□□ -0.57
HIST1H2BD-201ENST00000289316 NACADO15069 1562 aa11.41□□□□□ -0.58
HIST1H2BD-201ENST00000289316 CNKSR2Q8WXI2 1034 aa11.39□□□□□ -0.59
HIST1H2BD-201ENST00000289316 HOXD11P31277 338 aaPredicted RBP11.37□□□□□ -0.59
HIST1H2BD-201ENST00000289316 TRIM41Q8WV44 630 aa11.37□□□□□ -0.59
HIST1H2BD-201ENST00000289316 CC2D2AQ9P2K1 1620 aa11.36□□□□□ -0.59
HIST1H2BD-201ENST00000289316 BICRAQ9NZM4 1560 aa11.35□□□□□ -0.59
HIST1H2BD-201ENST00000289316 DCAF8L1A6NGE4 600 aa11.33□□□□□ -0.6
HIST1H2BD-201ENST00000289316 UNC13AQ9UPW8 1703 aa11.29□□□□□ -0.6
HIST1H2BD-201ENST00000289316 RNF216Q9NWF9 866 aaPredicted RBP11.28□□□□□ -0.6
HIST1H2BD-201ENST00000289316 CUX2O14529 1486 aa11.27□□□□□ -0.6
HIST1H2BD-201ENST00000289316 DCAF8L2P0C7V8 631 aa11.26□□□□□ -0.61
HIST1H2BD-201ENST00000289316 NCBP3Q53F19 620 aaKnown RBP11.17□□□□□ -0.62
HIST1H2BD-201ENST00000289316 SHROOM4Q9ULL8 1493 aa11.16□□□□□ -0.62
HIST1H2BD-201ENST00000289316 EIF4G1Q04637 1599 aaKnown RBP11.15□□□□□ -0.62
HIST1H2BD-201ENST00000289316 CACNB1Q02641 598 aaPredicted RBP11.14□□□□□ -0.63
HIST1H2BD-201ENST00000289316 RNF39Q9H2S5 420 aa11.08□□□□□ -0.64
HIST1H2BD-201ENST00000289316 MYO15BQ96JP2 1530 aa11.01□□□□□ -0.65
HIST1H2BD-201ENST00000289316 ERCC6Q03468 1493 aa11□□□□□ -0.65
HIST1H2BD-201ENST00000289316 NPM3O75607 178 aaKnown RBP11□□□□□ -0.65
HIST1H2BD-201ENST00000289316 C1QBPQ07021 282 aaKnown RBP10.92□□□□□ -0.66
HIST1H2BD-201ENST00000289316 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.84□□□□□ -0.673e-20■■■□□ 14.7
HIST1H2BD-201ENST00000289316 KCNA4P22459 653 aa10.79□□□□□ -0.68
HIST1H2BD-201ENST00000289316 SCRIBQ14160 1630 aa10.77□□□□□ -0.68
HIST1H2BD-201ENST00000289316 OSCARQ8IYS5 282 aa10.7□□□□□ -0.7
HIST1H2BD-201ENST00000289316 THOC2Q8NI27 1593 aaKnown RBP10.65□□□□□ -0.71
HIST1H2BD-201ENST00000289316 ILDR1Q86SU0 546 aaPredicted RBP10.64□□□□□ -0.71
HIST1H2BD-201ENST00000289316 NESP48681 1621 aa10.64□□□□□ -0.71
HIST1H2BD-201ENST00000289316 TRHP20396 242 aaPredicted RBP10.63□□□□□ -0.71
HIST1H2BD-201ENST00000289316 U3KPZ7 1027 aaPredicted RBP10.62□□□□□ -0.71
HIST1H2BD-201ENST00000289316 NCAPD3P42695 1498 aa10.6□□□□□ -0.71
HIST1H2BD-201ENST00000289316 DCAF1Q9Y4B6 1507 aa10.55□□□□□ -0.72
HIST1H2BD-201ENST00000289316 BAZ1AQ9NRL2 1556 aaPredicted RBP10.53□□□□□ -0.72
HIST1H2BD-201ENST00000289316 RIMBP3CA6NJZ7 1639 aa10.51□□□□□ -0.73
HIST1H2BD-201ENST00000289316 RIMBP3BA6NNM3 1639 aa10.51□□□□□ -0.73
HIST1H2BD-201ENST00000289316 RIMBP3Q9UFD9 1639 aa10.51□□□□□ -0.73
HIST1H2BD-201ENST00000289316 SMARCA2P51531 1590 aa10.51□□□□□ -0.73
HIST1H2BD-201ENST00000289316 SLC4A2P04920 1241 aa10.5□□□□□ -0.73
HIST1H2BD-201ENST00000289316 CYB5RLQ6IPT4 315 aa10.49□□□□□ -0.73
HIST1H2BD-201ENST00000289316 PDS5BQ9NTI5 1447 aa10.46□□□□□ -0.74
HIST1H2BD-201ENST00000289316 CAPN15O75808 1086 aa10.45□□□□□ -0.74
HIST1H2BD-201ENST00000289316 SPINK5Q9NQ38 1064 aaPredicted RBP10.45□□□□□ -0.74
HIST1H2BD-201ENST00000289316 ARHGEF11O15085 1522 aa10.43□□□□□ -0.74
HIST1H2BD-201ENST00000289316 ZCCHC6Q5VYS8 1495 aaKnown RBP10.43□□□□□ -0.74
HIST1H2BD-201ENST00000289316 LAMC3Q9Y6N6 1575 aa10.42□□□□□ -0.74
HIST1H2BD-201ENST00000289316 ATAD2BQ9ULI0 1458 aa10.42□□□□□ -0.74
HIST1H2BD-201ENST00000289316 KIF21AQ7Z4S6 1674 aa10.38□□□□□ -0.75
HIST1H2BD-201ENST00000289316 HMGXB3Q12766 1538 aa10.38□□□□□ -0.75
HIST1H2BD-201ENST00000289316 MRC2Q9UBG0 1479 aa10.37□□□□□ -0.75
HIST1H2BD-201ENST00000289316 DSG3P32926 999 aa10.37□□□□□ -0.75
HIST1H2BD-201ENST00000289316 WDR62O43379 1518 aa10.35□□□□□ -0.75
HIST1H2BD-201ENST00000289316 APLP2Q06481 763 aa10.34□□□□□ -0.75
HIST1H2BD-201ENST00000289316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.31□□□□□ -0.76
HIST1H2BD-201ENST00000289316 HNRNPUL2Q1KMD3 747 aaKnown RBP10.31□□□□□ -0.76
HIST1H2BD-201ENST00000289316 ARAP1Q96P48 1450 aa10.28□□□□□ -0.76
HIST1H2BD-201ENST00000289316 ZNF219Q9P2Y4 722 aaPredicted RBP10.27□□□□□ -0.77
HIST1H2BD-201ENST00000289316 SAMD1Q6SPF0 538 aaPredicted RBP10.26□□□□□ -0.77
HIST1H2BD-201ENST00000289316 BAZ1BQ9UIG0 1483 aaKnown RBP10.25□□□□□ -0.77
HIST1H2BD-201ENST00000289316 CADPSQ9ULU8 1353 aa10.25□□□□□ -0.77
HIST1H2BD-201ENST00000289316 ABCB7O75027 752 aa10.21□□□□□ -0.77
HIST1H2BD-201ENST00000289316 SLC4A1APQ9BWU0 796 aaKnown RBP10.2□□□□□ -0.78
HIST1H2BD-201ENST00000289316 MYCNP04198 464 aaPredicted RBP10.19□□□□□ -0.78
HIST1H2BD-201ENST00000289316 CEP164Q9UPV0 1460 aa10.16□□□□□ -0.78
HIST1H2BD-201ENST00000289316 RSF1Q96T23 1441 aaPredicted RBP10.15□□□□□ -0.79
HIST1H2BD-201ENST00000289316 SMARCA4P51532 1647 aa10.14□□□□□ -0.79
HIST1H2BD-201ENST00000289316 KDM4FA0A1W2PPD8 638 aa10.11□□□□□ -0.79
HIST1H2BD-201ENST00000289316 FANCD2Q9BXW9 1451 aa10.09□□□□□ -0.79
HIST1H2BD-201ENST00000289316 FOXD4L1Q9NU39 408 aa10.08□□□□□ -0.8
HIST1H2BD-201ENST00000289316 PEG3Q9GZU2 1588 aa10.07□□□□□ -0.8
HIST1H2BD-201ENST00000289316 FBXO41Q8TF61 875 aa10.07□□□□□ -0.8
HIST1H2BD-201ENST00000289316 ZNF608Q9ULD9 1512 aaPredicted RBP10.06□□□□□ -0.8
HIST1H2BD-201ENST00000289316 URB2Q14146 1524 aaKnown RBP10.04□□□□□ -0.8
HIST1H2BD-201ENST00000289316 SOCS7O14512 581 aa10.03□□□□□ -0.8
HIST1H2BD-201ENST00000289316 FBLN2P98095 1184 aa10.02□□□□□ -0.81
HIST1H2BD-201ENST00000289316 LMTK3Q96Q04 1460 aa10.02□□□□□ -0.81
HIST1H2BD-201ENST00000289316 IFT140Q96RY7 1462 aa10.01□□□□□ -0.81
HIST1H2BD-201ENST00000289316 POLA2Q14181 598 aa9.99□□□□□ -0.81
HIST1H2BD-201ENST00000289316 ERCC6L2Q5T890 1561 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms