RNA–Protein interactions for RNA: ENST00000288266.7

APPL1-201, Transcript of adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APPL1, Length 6,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APPL1-201ENST00000288266 NISCHQ9Y2I1 1504 aa26.07■■□□□ 1.76
APPL1-201ENST00000288266 SUPT5HO00267 1087 aaKnown RBP25.22■■□□□ 1.63
APPL1-201ENST00000288266 DCAF8L2P0C7V8 631 aa25.2■■□□□ 1.62
APPL1-201ENST00000288266 SHROOM4Q9ULL8 1493 aa24.76■■□□□ 1.55
APPL1-201ENST00000288266 PCGF6Q9BYE7 350 aa24.45■■□□□ 1.51
APPL1-201ENST00000288266 PELP1Q8IZL8 1130 aaKnown RBP24.44■■□□□ 1.5
APPL1-201ENST00000288266 ZEB1P37275 1124 aaPredicted RBP24.1■■□□□ 1.45
APPL1-201ENST00000288266 HRCP23327 699 aa24.03■■□□□ 1.44
APPL1-201ENST00000288266 MYT1Q01538 1121 aa23.98■■□□□ 1.43
APPL1-201ENST00000288266 CENPBP07199 599 aaPredicted RBP23.88■■□□□ 1.41
APPL1-201ENST00000288266 EHMT2Q96KQ7 1210 aa23.88■■□□□ 1.41
APPL1-201ENST00000288266 FAM9AQ8IZU1 332 aaPredicted RBP23.59■■□□□ 1.37
APPL1-201ENST00000288266 TRIM26Q12899 539 aaPredicted RBP23.55■■□□□ 1.36
APPL1-201ENST00000288266 CCER1Q8TC90 406 aaPredicted RBP23.51■■□□□ 1.35
APPL1-201ENST00000288266 TRIM41Q8WV44 630 aa23.39■■□□□ 1.34
APPL1-201ENST00000288266 APLP2Q06481 763 aa23.38■■□□□ 1.33
APPL1-201ENST00000288266 PPARGC1BQ86YN6 1023 aaKnown RBP23.36■■□□□ 1.33
APPL1-201ENST00000288266 CHIC1Q5VXU3 224 aa23.33■■□□□ 1.32
APPL1-201ENST00000288266 TTBK1Q5TCY1 1321 aaPredicted RBP23.26■■□□□ 1.31
APPL1-201ENST00000288266 YTHDC1Q96MU7 727 aaKnown RBP23.11■■□□□ 1.29
APPL1-201ENST00000288266 LOC105371045A0A1W2PR82 267 aa23.07■■□□□ 1.28
APPL1-201ENST00000288266 ERICH6Q7L0X2 663 aa23.03■■□□□ 1.28
APPL1-201ENST00000288266 NEFLP07196 543 aa22.81■■□□□ 1.24
APPL1-201ENST00000288266 UBTFP17480 764 aaKnown RBP22.77■■□□□ 1.23
APPL1-201ENST00000288266 DIEXFQ68CQ4 756 aaKnown RBP22.74■■□□□ 1.23
APPL1-201ENST00000288266 GTF3C3Q9Y5Q9 886 aa22.62■■□□□ 1.21
APPL1-201ENST00000288266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.6■■□□□ 1.21
APPL1-201ENST00000288266 RANGAP1P46060 587 aaPredicted RBP22.58■■□□□ 1.2
APPL1-201ENST00000288266 ACIN1Q9UKV3 1341 aaKnown RBP22.53■■□□□ 1.2
APPL1-201ENST00000288266 DCAF1Q9Y4B6 1507 aa22.44■■□□□ 1.18
APPL1-201ENST00000288266 HNRNPUL2Q1KMD3 747 aaKnown RBP22.32■■□□□ 1.16
APPL1-201ENST00000288266 SCAF1Q9H7N4 1312 aaKnown RBP22.23■■□□□ 1.15
APPL1-201ENST00000288266 ZNF316A6NFI3 1004 aaPredicted RBP22.21■■□□□ 1.15
APPL1-201ENST00000288266 ATP1B4Q9UN42 357 aaPredicted RBP22.15■■□□□ 1.14
APPL1-201ENST00000288266 NEUROD1Q13562 356 aa22.05■■□□□ 1.12
APPL1-201ENST00000288266 ITGAEP38570 1179 aa22■■□□□ 1.11
APPL1-201ENST00000288266 MYO15BQ96JP2 1530 aa22■■□□□ 1.11
APPL1-201ENST00000288266 CLSPNQ9HAW4 1339 aa21.98■■□□□ 1.11
APPL1-201ENST00000288266 BCANQ96GW7 911 aa21.89■■□□□ 1.09
APPL1-201ENST00000288266 RTL5Q5HYW3 569 aaPredicted RBP21.86■■□□□ 1.09
APPL1-201ENST00000288266 ZCCHC6Q5VYS8 1495 aaKnown RBP21.84■■□□□ 1.09
APPL1-201ENST00000288266 CCDC180Q9P1Z9 1646 aa21.82■■□□□ 1.08
APPL1-201ENST00000288266 DAXXQ9UER7 740 aaPredicted RBP21.81■■□□□ 1.08
APPL1-201ENST00000288266 CDK11AQ9UQ88 783 aaPredicted RBP21.74■■□□□ 1.07
APPL1-201ENST00000288266 ANP32CO43423 234 aa21.68■■□□□ 1.06
APPL1-201ENST00000288266 CSRNP3Q8WYN3 585 aa21.55■■□□□ 1.04
APPL1-201ENST00000288266 POLR3GLQ9BT43 218 aa21.55■■□□□ 1.04
APPL1-201ENST00000288266 MIER1Q8N108 512 aa21.52■■□□□ 1.04
APPL1-201ENST00000288266 FKBP8Q14318 412 aa21.51■■□□□ 1.03
APPL1-201ENST00000288266 FAM50AQ14320 339 aaKnown RBP21.5■■□□□ 1.03
APPL1-201ENST00000288266 MYT1LQ9UL68 1186 aa21.45■■□□□ 1.02
APPL1-201ENST00000288266 CNGB1Q14028 1251 aaPredicted RBP21.41■■□□□ 1.02
APPL1-201ENST00000288266 ANP32EQ9BTT0 268 aa21.37■■□□□ 1.01
APPL1-201ENST00000288266 ANP32AP39687 249 aaKnown RBP21.33■■□□□ 1
APPL1-201ENST00000288266 TRIM52Q96A61 297 aa21.22■□□□□ 0.99
APPL1-201ENST00000288266 DDX10Q13206 875 aaKnown RBP21.2■□□□□ 0.98
APPL1-201ENST00000288266 SCRIBQ14160 1630 aa21.15■□□□□ 0.98
APPL1-201ENST00000288266 HNRNPUQ00839 825 aaKnown RBP eCLIP21.15■□□□□ 0.98
APPL1-201ENST00000288266 CEP162Q5TB80 1403 aa21.11■□□□□ 0.97
APPL1-201ENST00000288266 SUPT16HQ9Y5B9 1047 aaKnown RBP21.1■□□□□ 0.97
APPL1-201ENST00000288266 RSF1Q96T23 1441 aaPredicted RBP21.1■□□□□ 0.97
APPL1-201ENST00000288266 ABCC9O60706 1549 aa21.07■□□□□ 0.96
APPL1-201ENST00000288266 TONSLQ96HA7 1378 aa21.05■□□□□ 0.96
APPL1-201ENST00000288266 EEA1Q15075 1411 aa21.01■□□□□ 0.95
APPL1-201ENST00000288266 NPM2Q86SE8 214 aaKnown RBP21■□□□□ 0.95
APPL1-201ENST00000288266 CLIP1P30622 1438 aa21■□□□□ 0.95
APPL1-201ENST00000288266 NBR1Q14596 966 aa20.99■□□□□ 0.95
APPL1-201ENST00000288266 BCL11AQ9H165 835 aa20.97■□□□□ 0.95
APPL1-201ENST00000288266 ZBTB47Q9UFB7 747 aaPredicted RBP20.97■□□□□ 0.95
APPL1-201ENST00000288266 TNIKQ9UKE5 1360 aa20.97■□□□□ 0.95
APPL1-201ENST00000288266 GOLGA3Q08378 1498 aa20.95■□□□□ 0.94
APPL1-201ENST00000288266 EIF5BO60841 1220 aaKnown RBP20.93■□□□□ 0.94
APPL1-201ENST00000288266 PABPN1Q86U42 306 aaKnown RBP eCLIP20.93■□□□□ 0.94
APPL1-201ENST00000288266 ZNF326Q5BKZ1 582 aaKnown RBP20.92■□□□□ 0.94
APPL1-201ENST00000288266 FAM9BQ8IZU0 186 aa20.9■□□□□ 0.94
APPL1-201ENST00000288266 CCDC136Q96JN2 1154 aa20.89■□□□□ 0.94
APPL1-201ENST00000288266 IRX6P78412 446 aaPredicted RBP20.86■□□□□ 0.93
APPL1-201ENST00000288266 RB1CC1Q8TDY2 1594 aa20.85■□□□□ 0.93
APPL1-201ENST00000288266 P3H3Q8IVL6 736 aa20.82■□□□□ 0.92
APPL1-201ENST00000288266 MRS2Q9HD23 443 aa20.78■□□□□ 0.92
APPL1-201ENST00000288266 GLIPR1L2Q4G1C9 344 aa20.75■□□□□ 0.91
APPL1-201ENST00000288266 TSHZ2Q9NRE2 1034 aa20.74■□□□□ 0.91
APPL1-201ENST00000288266 HIRIP3Q9BW71 556 aaPredicted RBP20.74■□□□□ 0.91
APPL1-201ENST00000288266 RBM19Q9Y4C8 960 aaKnown RBP20.73■□□□□ 0.91
APPL1-201ENST00000288266 CEP164Q9UPV0 1460 aa20.7■□□□□ 0.9
APPL1-201ENST00000288266 CANXP27824 592 aaKnown RBP20.7■□□□□ 0.9
APPL1-201ENST00000288266 SLC4A1APQ9BWU0 796 aaKnown RBP20.69■□□□□ 0.9
APPL1-201ENST00000288266 PPP4R2Q9NY27 417 aa20.68■□□□□ 0.9
APPL1-201ENST00000288266 TMC1Q8TDI8 760 aa20.64■□□□□ 0.89
APPL1-201ENST00000288266 NOP58Q9Y2X3 529 aaKnown RBP20.63■□□□□ 0.89
APPL1-201ENST00000288266 EIF4G2P78344 907 aaKnown RBP eCLIP20.62■□□□□ 0.89
APPL1-201ENST00000288266 WRNQ14191 1432 aaPredicted RBP eCLIP20.6■□□□□ 0.89
APPL1-201ENST00000288266 CCER2I3L3R5 266 aa20.6■□□□□ 0.89
APPL1-201ENST00000288266 DDRGK1Q96HY6 314 aa20.59■□□□□ 0.89
APPL1-201ENST00000288266 UPF2Q9HAU5 1272 aaKnown RBP20.56■□□□□ 0.88
APPL1-201ENST00000288266 DEKP35659 375 aaKnown RBP20.55■□□□□ 0.88
APPL1-201ENST00000288266 PPM1GO15355 546 aaPredicted RBP20.53■□□□□ 0.88
APPL1-201ENST00000288266 TIMELESSQ9UNS1 1208 aa20.51■□□□□ 0.87
APPL1-201ENST00000288266 ANP32BQ92688 251 aaKnown RBP20.51■□□□□ 0.87
APPL1-201ENST00000288266 SALL2Q9Y467 1007 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms