RNA–Protein interactions for RNA: ENST00000287097.5

CD109-201, Transcript of CD109 molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD109, Length 9,130 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-201ENST00000287097 DCAF8L2P0C7V8 631 aa13.38□□□□□ -0.27
CD109-201ENST00000287097 PELP1Q8IZL8 1130 aaKnown RBP13.2□□□□□ -0.3
CD109-201ENST00000287097 EHMT2Q96KQ7 1210 aa12.78□□□□□ -0.36
CD109-201ENST00000287097 ERICH6Q7L0X2 663 aa12.72□□□□□ -0.37
CD109-201ENST00000287097 SUPT5HO00267 1087 aaKnown RBP12.68□□□□□ -0.38
CD109-201ENST00000287097 CCER1Q8TC90 406 aaPredicted RBP12.58□□□□□ -0.4
CD109-201ENST00000287097 MYT1Q01538 1121 aa12.56□□□□□ -0.4
CD109-201ENST00000287097 TTBK1Q5TCY1 1321 aaPredicted RBP12.32□□□□□ -0.44
CD109-201ENST00000287097 SHROOM4Q9ULL8 1493 aa12.31□□□□□ -0.44
CD109-201ENST00000287097 CENPBP07199 599 aaPredicted RBP12.3□□□□□ -0.44
CD109-201ENST00000287097 APLP2Q06481 763 aa12.19□□□□□ -0.46
CD109-201ENST00000287097 FAM9AQ8IZU1 332 aaPredicted RBP12.12□□□□□ -0.47
CD109-201ENST00000287097 NEFLP07196 543 aa12.12□□□□□ -0.47
CD109-201ENST00000287097 YTHDC1Q96MU7 727 aaKnown RBP12.12□□□□□ -0.47
CD109-201ENST00000287097 PCGF6Q9BYE7 350 aa12.11□□□□□ -0.47
CD109-201ENST00000287097 RANGAP1P46060 587 aaPredicted RBP12.05□□□□□ -0.48
CD109-201ENST00000287097 DAXXQ9UER7 740 aaPredicted RBP12.01□□□□□ -0.49
CD109-201ENST00000287097 ZEB1P37275 1124 aaPredicted RBP11.92□□□□□ -0.5
CD109-201ENST00000287097 ATP1B4Q9UN42 357 aaPredicted RBP11.91□□□□□ -0.5
CD109-201ENST00000287097 PPARGC1BQ86YN6 1023 aaKnown RBP11.73□□□□□ -0.53
CD109-201ENST00000287097 RTL5Q5HYW3 569 aaPredicted RBP11.73□□□□□ -0.53
CD109-201ENST00000287097 ZNF316A6NFI3 1004 aaPredicted RBP11.67□□□□□ -0.54
CD109-201ENST00000287097 CNGB1Q14028 1251 aaPredicted RBP11.66□□□□□ -0.54
CD109-201ENST00000287097 POLR3GLQ9BT43 218 aa11.6□□□□□ -0.55
CD109-201ENST00000287097 UBTFP17480 764 aaKnown RBP11.57□□□□□ -0.56
CD109-201ENST00000287097 TRIM41Q8WV44 630 aa11.55□□□□□ -0.56
CD109-201ENST00000287097 CLSPNQ9HAW4 1339 aa11.52□□□□□ -0.57
CD109-201ENST00000287097 ITGAEP38570 1179 aa11.48□□□□□ -0.57
CD109-201ENST00000287097 CHIC1Q5VXU3 224 aa11.45□□□□□ -0.58
CD109-201ENST00000287097 MYT1LQ9UL68 1186 aa11.43□□□□□ -0.58
CD109-201ENST00000287097 SLC4A1APQ9BWU0 796 aaKnown RBP11.37□□□□□ -0.59
CD109-201ENST00000287097 GLIPR1L2Q4G1C9 344 aa11.35□□□□□ -0.59
CD109-201ENST00000287097 EIF5BO60841 1220 aaKnown RBP11.33□□□□□ -0.6
CD109-201ENST00000287097 NISCHQ9Y2I1 1504 aa11.32□□□□□ -0.6
CD109-201ENST00000287097 HRCP23327 699 aa11.32□□□□□ -0.6
CD109-201ENST00000287097 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.31□□□□□ -0.6
CD109-201ENST00000287097 HNRNPUL2Q1KMD3 747 aaKnown RBP11.31□□□□□ -0.6
CD109-201ENST00000287097 TRIM26Q12899 539 aaPredicted RBP11.24□□□□□ -0.61
CD109-201ENST00000287097 BCL11AQ9H165 835 aa11.24□□□□□ -0.61
CD109-201ENST00000287097 ZBTB47Q9UFB7 747 aaPredicted RBP11.24□□□□□ -0.61
CD109-201ENST00000287097 BCANQ96GW7 911 aa11.24□□□□□ -0.61
CD109-201ENST00000287097 CDK11AQ9UQ88 783 aaPredicted RBP11.22□□□□□ -0.61
CD109-201ENST00000287097 LOC105371045A0A1W2PR82 267 aa11.21□□□□□ -0.62
CD109-201ENST00000287097 ANP32BQ92688 251 aaKnown RBP11.19□□□□□ -0.62
CD109-201ENST00000287097 DIEXFQ68CQ4 756 aaKnown RBP11.11□□□□□ -0.63
CD109-201ENST00000287097 ANP32AP39687 249 aaKnown RBP11.11□□□□□ -0.63
CD109-201ENST00000287097 SLC24A1O60721 1099 aa11.07□□□□□ -0.64
CD109-201ENST00000287097 GTF3C3Q9Y5Q9 886 aa11.05□□□□□ -0.64
CD109-201ENST00000287097 NEUROD1Q13562 356 aa11.05□□□□□ -0.64
CD109-201ENST00000287097 CANXP27824 592 aaKnown RBP11.02□□□□□ -0.64
CD109-201ENST00000287097 HSP90AA1P07900 732 aaKnown RBP10.99□□□□□ -0.65
CD109-201ENST00000287097 FAM50AQ14320 339 aaKnown RBP10.99□□□□□ -0.65
CD109-201ENST00000287097 NPM2Q86SE8 214 aaKnown RBP10.98□□□□□ -0.65
CD109-201ENST00000287097 TRIM52Q96A61 297 aa10.98□□□□□ -0.65
CD109-201ENST00000287097 ZNF326Q5BKZ1 582 aaKnown RBP10.96□□□□□ -0.65
CD109-201ENST00000287097 ANP32CO43423 234 aa10.94□□□□□ -0.66
CD109-201ENST00000287097 TNNT2P45379 298 aaPredicted RBP10.93□□□□□ -0.66
CD109-201ENST00000287097 CDK11BP21127 795 aaKnown RBP10.89□□□□□ -0.67
CD109-201ENST00000287097 NEFMP07197 916 aa10.89□□□□□ -0.67
CD109-201ENST00000287097 UPF2Q9HAU5 1272 aaKnown RBP10.88□□□□□ -0.67
CD109-201ENST00000287097 ARXQ96QS3 562 aa10.85□□□□□ -0.67
CD109-201ENST00000287097 NBR1Q14596 966 aa10.84□□□□□ -0.67
CD109-201ENST00000287097 TRIM44Q96DX7 344 aaPredicted RBP10.76□□□□□ -0.69
CD109-201ENST00000287097 SALL2Q9Y467 1007 aaPredicted RBP10.76□□□□□ -0.69
CD109-201ENST00000287097 ACIN1Q9UKV3 1341 aaKnown RBP10.73□□□□□ -0.69
CD109-201ENST00000287097 ARID3CA6NKF2 412 aa10.73□□□□□ -0.69
CD109-201ENST00000287097 FKBP8Q14318 412 aa10.72□□□□□ -0.69
CD109-201ENST00000287097 PLPPR3Q6T4P5 718 aa10.69□□□□□ -0.7
CD109-201ENST00000287097 FBLN2P98095 1184 aa10.67□□□□□ -0.7
CD109-201ENST00000287097 DNTTIP2Q5QJE6 756 aaKnown RBP10.66□□□□□ -0.7
CD109-201ENST00000287097 P3H3Q8IVL6 736 aa10.65□□□□□ -0.7
CD109-201ENST00000287097 ANP32EQ9BTT0 268 aa10.65□□□□□ -0.71
CD109-201ENST00000287097 NCLP19338 710 aaKnown RBP10.64□□□□□ -0.71
CD109-201ENST00000287097 FAM9BQ8IZU0 186 aa10.62□□□□□ -0.71
CD109-201ENST00000287097 PTMAP06454 111 aaKnown RBP10.62□□□□□ -0.71
CD109-201ENST00000287097 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.62□□□□□ -0.71
CD109-201ENST00000287097 NAP1L5Q96NT1 182 aaPredicted RBP10.61□□□□□ -0.71
CD109-201ENST00000287097 AMER1Q5JTC6 1135 aaPredicted RBP10.61□□□□□ -0.71
CD109-201ENST00000287097 CCDC136Q96JN2 1154 aa10.61□□□□□ -0.71
CD109-201ENST00000287097 ERICH6BQ5W0A0 696 aa10.59□□□□□ -0.71
CD109-201ENST00000287097 IRX6P78412 446 aaPredicted RBP10.59□□□□□ -0.71
CD109-201ENST00000287097 GOLGA6L22H0YM25 854 aa10.59□□□□□ -0.71
CD109-201ENST00000287097 ZNF777Q9ULD5 760 aaPredicted RBP10.58□□□□□ -0.72
CD109-201ENST00000287097 HNRNPUQ00839 825 aaKnown RBP eCLIP10.58□□□□□ -0.72
CD109-201ENST00000287097 ZRSR1Q15695 479 aaKnown RBP10.58□□□□□ -0.72
CD109-201ENST00000287097 BECN1Q14457 450 aa10.58□□□□□ -0.72
CD109-201ENST00000287097 CHGAP10645 457 aaKnown RBP10.57□□□□□ -0.72
CD109-201ENST00000287097 DDRGK1Q96HY6 314 aa10.56□□□□□ -0.72
CD109-201ENST00000287097 PLEKHG5O94827 1062 aa10.55□□□□□ -0.72
CD109-201ENST00000287097 DDX10Q13206 875 aaKnown RBP10.55□□□□□ -0.72
CD109-201ENST00000287097 SENP3Q9H4L4 574 aaPredicted RBP10.54□□□□□ -0.72
CD109-201ENST00000287097 TPRNQ4KMQ1 711 aa10.53□□□□□ -0.72
CD109-201ENST00000287097 SENP3-EIF4A1A0A087X0R7 540 aa10.53□□□□□ -0.72
CD109-201ENST00000287097 MYH16Q9H6N6 1097 aa10.52□□□□□ -0.73
CD109-201ENST00000287097 A0A0G2JS52 829 aa10.5□□□□□ -0.73
CD109-201ENST00000287097 PABPN1Q86U42 306 aaKnown RBP eCLIP10.5□□□□□ -0.73
CD109-201ENST00000287097 RTN4Q9NQC3 1192 aaKnown RBP10.5□□□□□ -0.73
CD109-201ENST00000287097 TULP1O00294 542 aaPredicted RBP10.49□□□□□ -0.73
CD109-201ENST00000287097 HIRIP3Q9BW71 556 aaPredicted RBP10.48□□□□□ -0.73
CD109-201ENST00000287097 SCAF1Q9H7N4 1312 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms