RNA–Protein interactions for RNA: ENST00000282077.7

PDK1-201, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 14,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-201ENST00000282077 DCAF8L2P0C7V8 631 aa19.3■□□□□ 0.68
PDK1-201ENST00000282077 PELP1Q8IZL8 1130 aaKnown RBP18.95■□□□□ 0.62
PDK1-201ENST00000282077 SUPT5HO00267 1087 aaKnown RBP18.36■□□□□ 0.53
PDK1-201ENST00000282077 APLP2Q06481 763 aa18.13■□□□□ 0.49
PDK1-201ENST00000282077 NISCHQ9Y2I1 1504 aa18.04■□□□□ 0.48
PDK1-201ENST00000282077 CCER1Q8TC90 406 aaPredicted RBP18.04■□□□□ 0.48
PDK1-201ENST00000282077 ERICH6Q7L0X2 663 aa18.02■□□□□ 0.48
PDK1-201ENST00000282077 FAM9AQ8IZU1 332 aaPredicted RBP18■□□□□ 0.47
PDK1-201ENST00000282077 SHROOM4Q9ULL8 1493 aa17.93■□□□□ 0.46
PDK1-201ENST00000282077 EHMT2Q96KQ7 1210 aa17.92■□□□□ 0.46
PDK1-201ENST00000282077 CENPBP07199 599 aaPredicted RBP17.81■□□□□ 0.44
PDK1-201ENST00000282077 MYT1Q01538 1121 aa17.77■□□□□ 0.44
PDK1-201ENST00000282077 ZEB1P37275 1124 aaPredicted RBP17.65■□□□□ 0.42
PDK1-201ENST00000282077 NEFLP07196 543 aa17.54■□□□□ 0.4
PDK1-201ENST00000282077 PCGF6Q9BYE7 350 aa17.48■□□□□ 0.39
PDK1-201ENST00000282077 TTBK1Q5TCY1 1321 aaPredicted RBP17.43■□□□□ 0.38
PDK1-201ENST00000282077 YTHDC1Q96MU7 727 aaKnown RBP17.26■□□□□ 0.35
PDK1-201ENST00000282077 DAXXQ9UER7 740 aaPredicted RBP17.25■□□□□ 0.35
PDK1-201ENST00000282077 ATP1B4Q9UN42 357 aaPredicted RBP17.23■□□□□ 0.35
PDK1-201ENST00000282077 RANGAP1P46060 587 aaPredicted RBP17.17■□□□□ 0.34
PDK1-201ENST00000282077 TRIM41Q8WV44 630 aa17.13■□□□□ 0.33
PDK1-201ENST00000282077 UBTFP17480 764 aaKnown RBP17.07■□□□□ 0.32
PDK1-201ENST00000282077 ZNF316A6NFI3 1004 aaPredicted RBP16.81■□□□□ 0.28
PDK1-201ENST00000282077 TRIM26Q12899 539 aaPredicted RBP16.77■□□□□ 0.28
PDK1-201ENST00000282077 RTL5Q5HYW3 569 aaPredicted RBP16.77■□□□□ 0.27
PDK1-201ENST00000282077 POLR3GLQ9BT43 218 aa16.7■□□□□ 0.26
PDK1-201ENST00000282077 MYT1LQ9UL68 1186 aa16.69■□□□□ 0.26
PDK1-201ENST00000282077 CLSPNQ9HAW4 1339 aa16.62■□□□□ 0.25
PDK1-201ENST00000282077 HRCP23327 699 aa16.56■□□□□ 0.24
PDK1-201ENST00000282077 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.54■□□□□ 0.24
PDK1-201ENST00000282077 HNRNPUL2Q1KMD3 747 aaKnown RBP16.54■□□□□ 0.24
PDK1-201ENST00000282077 PPARGC1BQ86YN6 1023 aaKnown RBP16.54■□□□□ 0.24
PDK1-201ENST00000282077 SLC4A1APQ9BWU0 796 aaKnown RBP16.54■□□□□ 0.24
PDK1-201ENST00000282077 ITGAEP38570 1179 aa16.52■□□□□ 0.23
PDK1-201ENST00000282077 CNGB1Q14028 1251 aaPredicted RBP16.38■□□□□ 0.21
PDK1-201ENST00000282077 ZBTB47Q9UFB7 747 aaPredicted RBP16.38■□□□□ 0.21
PDK1-201ENST00000282077 CHIC1Q5VXU3 224 aa16.35■□□□□ 0.21
PDK1-201ENST00000282077 DIEXFQ68CQ4 756 aaKnown RBP16.35■□□□□ 0.21
PDK1-201ENST00000282077 CDK11AQ9UQ88 783 aaPredicted RBP16.27■□□□□ 0.2
PDK1-201ENST00000282077 ANP32CO43423 234 aa16.17■□□□□ 0.18
PDK1-201ENST00000282077 FAM50AQ14320 339 aaKnown RBP16.16■□□□□ 0.18
PDK1-201ENST00000282077 CANXP27824 592 aaKnown RBP16.16■□□□□ 0.18
PDK1-201ENST00000282077 TRIM52Q96A61 297 aa16.11■□□□□ 0.17
PDK1-201ENST00000282077 ANP32BQ92688 251 aaKnown RBP16.1■□□□□ 0.17
PDK1-201ENST00000282077 ANP32AP39687 249 aaKnown RBP16.1■□□□□ 0.17
PDK1-201ENST00000282077 NEFMP07197 916 aa16.1■□□□□ 0.17
PDK1-201ENST00000282077 LOC105371045A0A1W2PR82 267 aa16.06■□□□□ 0.16
PDK1-201ENST00000282077 SLC24A1O60721 1099 aa16.04■□□□□ 0.16
PDK1-201ENST00000282077 NEUROD1Q13562 356 aa16.02■□□□□ 0.16
PDK1-201ENST00000282077 BCANQ96GW7 911 aa16.01■□□□□ 0.15
PDK1-201ENST00000282077 GLIPR1L2Q4G1C9 344 aa16■□□□□ 0.15
PDK1-201ENST00000282077 GTF3C3Q9Y5Q9 886 aa15.99■□□□□ 0.15
PDK1-201ENST00000282077 ZNF326Q5BKZ1 582 aaKnown RBP15.94■□□□□ 0.14
PDK1-201ENST00000282077 HSP90AA1P07900 732 aaKnown RBP15.92■□□□□ 0.14
PDK1-201ENST00000282077 BCL11AQ9H165 835 aa15.9■□□□□ 0.14
PDK1-201ENST00000282077 UPF2Q9HAU5 1272 aaKnown RBP15.89■□□□□ 0.13
PDK1-201ENST00000282077 EIF5BO60841 1220 aaKnown RBP15.82■□□□□ 0.12
PDK1-201ENST00000282077 NPM2Q86SE8 214 aaKnown RBP15.79■□□□□ 0.12
PDK1-201ENST00000282077 ACIN1Q9UKV3 1341 aaKnown RBP15.69■□□□□ 0.1
PDK1-201ENST00000282077 CDK11BP21127 795 aaKnown RBP15.65■□□□□ 0.1
PDK1-201ENST00000282077 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.62■□□□□ 0.09
PDK1-201ENST00000282077 TONSLQ96HA7 1378 aa15.61■□□□□ 0.09
PDK1-201ENST00000282077 FBLN2P98095 1184 aa15.6■□□□□ 0.09
PDK1-201ENST00000282077 ESF1Q9H501 851 aaKnown RBP15.6■□□□□ 0.09
PDK1-201ENST00000282077 FKBP8Q14318 412 aa15.57■□□□□ 0.08
PDK1-201ENST00000282077 MYH16Q9H6N6 1097 aa15.54■□□□□ 0.08
PDK1-201ENST00000282077 STAG3Q9UJ98 1225 aa15.52■□□□□ 0.07
PDK1-201ENST00000282077 HNRNPUQ00839 825 aaKnown RBP eCLIP15.51■□□□□ 0.07
PDK1-201ENST00000282077 CCDC136Q96JN2 1154 aa15.51■□□□□ 0.07
PDK1-201ENST00000282077 NBR1Q14596 966 aa15.5■□□□□ 0.07
PDK1-201ENST00000282077 ANP32EQ9BTT0 268 aa15.5■□□□□ 0.07
PDK1-201ENST00000282077 TNNT2P45379 298 aaPredicted RBP15.49■□□□□ 0.07
PDK1-201ENST00000282077 ABCC9O60706 1549 aa15.47■□□□□ 0.07
PDK1-201ENST00000282077 ZNF777Q9ULD5 760 aaPredicted RBP15.47■□□□□ 0.07
PDK1-201ENST00000282077 BECN1Q14457 450 aa15.47■□□□□ 0.07
PDK1-201ENST00000282077 WDR43Q15061 677 aaKnown RBP eCLIP15.46■□□□□ 0.07
PDK1-201ENST00000282077 TMC1Q8TDI8 760 aa15.45■□□□□ 0.06
PDK1-201ENST00000282077 DDRGK1Q96HY6 314 aa15.45■□□□□ 0.06
PDK1-201ENST00000282077 TRIM44Q96DX7 344 aaPredicted RBP15.45■□□□□ 0.06
PDK1-201ENST00000282077 NCLP19338 710 aaKnown RBP15.44■□□□□ 0.06
PDK1-201ENST00000282077 FAM9BQ8IZU0 186 aa15.43■□□□□ 0.06
PDK1-201ENST00000282077 SCRIBQ14160 1630 aa15.43■□□□□ 0.06
PDK1-201ENST00000282077 ARXQ96QS3 562 aa15.43■□□□□ 0.06
PDK1-201ENST00000282077 GOLGA6L22H0YM25 854 aa15.4■□□□□ 0.06
PDK1-201ENST00000282077 DCAF1Q9Y4B6 1507 aa15.4■□□□□ 0.06
PDK1-201ENST00000282077 PABPN1Q86U42 306 aaKnown RBP eCLIP15.38■□□□□ 0.05
PDK1-201ENST00000282077 P3H3Q8IVL6 736 aa15.37■□□□□ 0.05
PDK1-201ENST00000282077 CHGAP10645 457 aaKnown RBP15.37■□□□□ 0.05
PDK1-201ENST00000282077 ARID3CA6NKF2 412 aa15.36■□□□□ 0.05
PDK1-201ENST00000282077 ZRSR1Q15695 479 aaKnown RBP15.35■□□□□ 0.05
PDK1-201ENST00000282077 CASC1Q6TDU7 716 aa15.34■□□□□ 0.05
PDK1-201ENST00000282077 CCDC180Q9P1Z9 1646 aa15.32■□□□□ 0.04
PDK1-201ENST00000282077 DDX10Q13206 875 aaKnown RBP15.31■□□□□ 0.04
PDK1-201ENST00000282077 SALL2Q9Y467 1007 aaPredicted RBP15.3■□□□□ 0.04
PDK1-201ENST00000282077 CSRNP3Q8WYN3 585 aa15.29■□□□□ 0.04
PDK1-201ENST00000282077 PTMAP06454 111 aaKnown RBP15.27■□□□□ 0.03
PDK1-201ENST00000282077 MRS2Q9HD23 443 aa15.26■□□□□ 0.03
PDK1-201ENST00000282077 NPM1P06748 294 aaKnown RBP eCLIP15.26■□□□□ 0.03
PDK1-201ENST00000282077 DNTTIP2Q5QJE6 756 aaKnown RBP15.24■□□□□ 0.03
PDK1-201ENST00000282077 GOLGA6L6A8MZA4 724 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms