RNA–Protein interactions for RNA: ENST00000280663.12

CACNA2D4-201, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 5,936 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-201ENST00000280663 NSUN2Q08J23 767 aaKnown RBP eCLIP14.3□□□□□ -0.121e-30■■■■■ 106.9
CACNA2D4-201ENST00000280663 U2AF1Q01081 240 aaKnown RBP eCLIP16.82■□□□□ 0.283e-9■■■■■ 101.8
CACNA2D4-201ENST00000280663 RBFOX2O43251 390 aaKnown RBP eCLIP11.65□□□□□ -0.548e-8■■■■■ 84.8
CACNA2D4-201ENST00000280663 SLBPQ14493 270 aaKnown RBP eCLIP13.12□□□□□ -0.318e-12■■■■■ 57.7
CACNA2D4-201ENST00000280663 TRA2AQ13595 282 aaKnown RBP eCLIP11.87□□□□□ -0.514e-10■■■■■ 54.9
CACNA2D4-201ENST00000280663 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.14■□□□□ 0.011e-6■■■■■ 39.7
CACNA2D4-201ENST00000280663 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.8□□□□□ -0.846e-7■■■■■ 34.9
CACNA2D4-201ENST00000280663 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.47□□□□□ -0.094e-7■■■■■ 32.3
CACNA2D4-201ENST00000280663 U2AF2P26368 475 aaKnown RBP eCLIP15.28■□□□□ 0.041e-10■■■■■ 30.1
CACNA2D4-201ENST00000280663 SF3A3Q12874 501 aaKnown RBP eCLIP14.86□□□□□ -0.035e-7■■■■■ 27.9
CACNA2D4-201ENST00000280663 RBM22Q9NW64 420 aaKnown RBP eCLIP13.74□□□□□ -0.212e-6■■■■□ 25.8
CACNA2D4-201ENST00000280663 EFTUD2Q15029 972 aaKnown RBP eCLIP14.41□□□□□ -0.19e-7■■■■□ 25.7
CACNA2D4-201ENST00000280663 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.41■□□□□ 0.068e-8■■■■□ 25.3
CACNA2D4-201ENST00000280663 HNRNPMP52272 730 aaKnown RBP eCLIP16.34■□□□□ 0.212e-7■■■■□ 25
CACNA2D4-201ENST00000280663 AQRO60306 1485 aaKnown RBP eCLIP15.74■□□□□ 0.111e-6■■■■□ 23.9
CACNA2D4-201ENST00000280663 MATR3P43243 847 aaKnown RBP eCLIP15.53■□□□□ 0.086e-6■■■■□ 21.9
CACNA2D4-201ENST00000280663 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.96□□□□□ -0.172e-6■■■■□ 21.8
CACNA2D4-201ENST00000280663 UPF1Q92900 1129 aaKnown RBP eCLIP13.13□□□□□ -0.313e-6■■■■□ 21.4
CACNA2D4-201ENST00000280663 NCBP2P52298 156 aaKnown RBP eCLIP13.17□□□□□ -0.33e-7■■■□□ 19
CACNA2D4-201ENST00000280663 HNRNPLP14866 589 aaKnown RBP eCLIP13.54□□□□□ -0.245e-7■■■□□ 18.9
CACNA2D4-201ENST00000280663 SMNDC1O75940 238 aaKnown RBP eCLIP13.94□□□□□ -0.184e-7■■■□□ 17.2
CACNA2D4-201ENST00000280663 SF3B4Q15427 424 aaKnown RBP eCLIP12.62□□□□□ -0.392e-11■■■□□ 16.3
CACNA2D4-201ENST00000280663 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.47□□□□□ -0.091e-11■■■□□ 16.1
CACNA2D4-201ENST00000280663 SRSF1Q07955 248 aaKnown RBP eCLIP11.35□□□□□ -0.594e-9■■■□□ 15.5
CACNA2D4-201ENST00000280663 FXR2P51116 673 aaKnown RBP eCLIP14.06□□□□□ -0.166e-7■■■□□ 14.8
CACNA2D4-201ENST00000280663 PPIGQ13427 754 aaKnown RBP eCLIP13□□□□□ -0.331e-9■■■□□ 14.6
CACNA2D4-201ENST00000280663 PCBP2Q15366 365 aaKnown RBP eCLIP12.98□□□□□ -0.333e-6■■■□□ 14.6
CACNA2D4-201ENST00000280663 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.37□□□□□ -0.271e-6■■□□□ 13.5
CACNA2D4-201ENST00000280663 LSM11P83369 360 aaKnown RBP eCLIP11.95□□□□□ -0.54e-6■■□□□ 11.5
CACNA2D4-201ENST00000280663 PRPF4O43172 522 aaKnown RBP eCLIP14.09□□□□□ -0.151e-7■□□□□ 11.2
CACNA2D4-201ENST00000280663 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.38□□□□□ -0.115e-10■□□□□ 11.1
CACNA2D4-201ENST00000280663 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.68■□□□□ 0.17e-7■□□□□ 10.9
CACNA2D4-201ENST00000280663 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.58■□□□□ 0.47e-9■□□□□ 9.3
CACNA2D4-201ENST00000280663 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.79□□□□□ -0.24e-6■□□□□ 8.2
Retrieved 34 of 34 RNA–protein pairs in 7 ms