RNA–Protein interactions for RNA: ENST00000268489.9

ZFHX3-201, Transcript of zinc finger homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZFHX3, Length 16,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX3-201ENST00000268489 MYT1Q01538 1121 aa14.73□□□□□ -0.05
ZFHX3-201ENST00000268489 PELP1Q8IZL8 1130 aaKnown RBP14.68□□□□□ -0.06
ZFHX3-201ENST00000268489 ZEB1P37275 1124 aaPredicted RBP14.12□□□□□ -0.15
ZFHX3-201ENST00000268489 DCAF8L2P0C7V8 631 aa13.98□□□□□ -0.17
ZFHX3-201ENST00000268489 CENPBP07199 599 aaPredicted RBP13.92□□□□□ -0.18
ZFHX3-201ENST00000268489 CCER1Q8TC90 406 aaPredicted RBP13.85□□□□□ -0.19
ZFHX3-201ENST00000268489 SUPT5HO00267 1087 aaKnown RBP13.82□□□□□ -0.2
ZFHX3-201ENST00000268489 PCGF6Q9BYE7 350 aa13.66□□□□□ -0.22
ZFHX3-201ENST00000268489 APLP2Q06481 763 aa13.57□□□□□ -0.24
ZFHX3-201ENST00000268489 ERICH6Q7L0X2 663 aa13.51□□□□□ -0.25
ZFHX3-201ENST00000268489 NISCHQ9Y2I1 1504 aa13.49□□□□□ -0.25
ZFHX3-201ENST00000268489 TTBK1Q5TCY1 1321 aaPredicted RBP13.47□□□□□ -0.25
ZFHX3-201ENST00000268489 YTHDC1Q96MU7 727 aaKnown RBP13.46□□□□□ -0.25
ZFHX3-201ENST00000268489 HRCP23327 699 aa13.44□□□□□ -0.26
ZFHX3-201ENST00000268489 NEFLP07196 543 aa13.36□□□□□ -0.27
ZFHX3-201ENST00000268489 TRIM26Q12899 539 aaPredicted RBP13.33□□□□□ -0.28
ZFHX3-201ENST00000268489 FAM9AQ8IZU1 332 aaPredicted RBP13.26□□□□□ -0.29
ZFHX3-201ENST00000268489 SHROOM4Q9ULL8 1493 aa13.11□□□□□ -0.31
ZFHX3-201ENST00000268489 TRIM41Q8WV44 630 aa13.08□□□□□ -0.32
ZFHX3-201ENST00000268489 DAXXQ9UER7 740 aaPredicted RBP13.04□□□□□ -0.32
ZFHX3-201ENST00000268489 CLSPNQ9HAW4 1339 aa12.95□□□□□ -0.34
ZFHX3-201ENST00000268489 MYT1LQ9UL68 1186 aa12.94□□□□□ -0.34
ZFHX3-201ENST00000268489 DIEXFQ68CQ4 756 aaKnown RBP12.87□□□□□ -0.35
ZFHX3-201ENST00000268489 EHMT2Q96KQ7 1210 aa12.85□□□□□ -0.35
ZFHX3-201ENST00000268489 RTL5Q5HYW3 569 aaPredicted RBP12.85□□□□□ -0.35
ZFHX3-201ENST00000268489 UBTFP17480 764 aaKnown RBP12.85□□□□□ -0.35
ZFHX3-201ENST00000268489 CHIC1Q5VXU3 224 aa12.74□□□□□ -0.37
ZFHX3-201ENST00000268489 CDK11AQ9UQ88 783 aaPredicted RBP12.69□□□□□ -0.38
ZFHX3-201ENST00000268489 ACIN1Q9UKV3 1341 aaKnown RBP12.69□□□□□ -0.38
ZFHX3-201ENST00000268489 GTF3C3Q9Y5Q9 886 aa12.66□□□□□ -0.38
ZFHX3-201ENST00000268489 ZNF316A6NFI3 1004 aaPredicted RBP12.63□□□□□ -0.39
ZFHX3-201ENST00000268489 LOC105371045A0A1W2PR82 267 aa12.59□□□□□ -0.39
ZFHX3-201ENST00000268489 PPARGC1BQ86YN6 1023 aaKnown RBP12.57□□□□□ -0.4
ZFHX3-201ENST00000268489 GLIPR1L2Q4G1C9 344 aa12.54□□□□□ -0.4
ZFHX3-201ENST00000268489 ANP32CO43423 234 aa12.5□□□□□ -0.41
ZFHX3-201ENST00000268489 ATP1B4Q9UN42 357 aaPredicted RBP12.45□□□□□ -0.42
ZFHX3-201ENST00000268489 ANP32AP39687 249 aaKnown RBP12.43□□□□□ -0.42
ZFHX3-201ENST00000268489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.4□□□□□ -0.43
ZFHX3-201ENST00000268489 ANP32BQ92688 251 aaKnown RBP12.35□□□□□ -0.43
ZFHX3-201ENST00000268489 RANGAP1P46060 587 aaPredicted RBP12.34□□□□□ -0.43
ZFHX3-201ENST00000268489 ANP32EQ9BTT0 268 aa12.34□□□□□ -0.43
ZFHX3-201ENST00000268489 HNRNPUL2Q1KMD3 747 aaKnown RBP12.33□□□□□ -0.44
ZFHX3-201ENST00000268489 ZBTB47Q9UFB7 747 aaPredicted RBP12.19□□□□□ -0.46
ZFHX3-201ENST00000268489 SCAF1Q9H7N4 1312 aaKnown RBP12.18□□□□□ -0.46
ZFHX3-201ENST00000268489 DCAF1Q9Y4B6 1507 aa12.16□□□□□ -0.46
ZFHX3-201ENST00000268489 ITGAEP38570 1179 aa12.16□□□□□ -0.46
ZFHX3-201ENST00000268489 EIF5BO60841 1220 aaKnown RBP12.15□□□□□ -0.46
ZFHX3-201ENST00000268489 NEUROD1Q13562 356 aa12.15□□□□□ -0.46
ZFHX3-201ENST00000268489 UPF2Q9HAU5 1272 aaKnown RBP12.12□□□□□ -0.47
ZFHX3-201ENST00000268489 BCANQ96GW7 911 aa12.12□□□□□ -0.47
ZFHX3-201ENST00000268489 TNNT2P45379 298 aaPredicted RBP12.11□□□□□ -0.47
ZFHX3-201ENST00000268489 POLR3GLQ9BT43 218 aa12.11□□□□□ -0.47
ZFHX3-201ENST00000268489 DDRGK1Q96HY6 314 aa12.1□□□□□ -0.47
ZFHX3-201ENST00000268489 ERICH6BQ5W0A0 696 aa12.08□□□□□ -0.48
ZFHX3-201ENST00000268489 FKBP8Q14318 412 aa12.08□□□□□ -0.48
ZFHX3-201ENST00000268489 NCLP19338 710 aaKnown RBP12.04□□□□□ -0.48
ZFHX3-201ENST00000268489 FAM50AQ14320 339 aaKnown RBP12.03□□□□□ -0.48
ZFHX3-201ENST00000268489 BECN1Q14457 450 aa12□□□□□ -0.49
ZFHX3-201ENST00000268489 CSRNP3Q8WYN3 585 aa12□□□□□ -0.49
ZFHX3-201ENST00000268489 TRIM52Q96A61 297 aa11.99□□□□□ -0.49
ZFHX3-201ENST00000268489 CCDC136Q96JN2 1154 aa11.98□□□□□ -0.49
ZFHX3-201ENST00000268489 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.98□□□□□ -0.49
ZFHX3-201ENST00000268489 PPM1GO15355 546 aaPredicted RBP11.98□□□□□ -0.49
ZFHX3-201ENST00000268489 HSP90AA1P07900 732 aaKnown RBP11.96□□□□□ -0.5
ZFHX3-201ENST00000268489 MIER1Q8N108 512 aa11.95□□□□□ -0.5
ZFHX3-201ENST00000268489 NEFMP07197 916 aa11.94□□□□□ -0.5
ZFHX3-201ENST00000268489 CANXP27824 592 aaKnown RBP11.91□□□□□ -0.5
ZFHX3-201ENST00000268489 TRIM44Q96DX7 344 aaPredicted RBP11.89□□□□□ -0.51
ZFHX3-201ENST00000268489 TIMELESSQ9UNS1 1208 aa11.89□□□□□ -0.51
ZFHX3-201ENST00000268489 HNRNPUQ00839 825 aaKnown RBP eCLIP11.88□□□□□ -0.511e-6■■□□□ 12.1
ZFHX3-201ENST00000268489 NBR1Q14596 966 aa11.88□□□□□ -0.51
ZFHX3-201ENST00000268489 PPP4R2Q9NY27 417 aa11.87□□□□□ -0.51
ZFHX3-201ENST00000268489 GOLGA6L22H0YM25 854 aa11.87□□□□□ -0.51
ZFHX3-201ENST00000268489 TMC1Q8TDI8 760 aa11.86□□□□□ -0.51
ZFHX3-201ENST00000268489 DDX10Q13206 875 aaKnown RBP11.86□□□□□ -0.51
ZFHX3-201ENST00000268489 BCL11AQ9H165 835 aa11.85□□□□□ -0.51
ZFHX3-201ENST00000268489 NPM2Q86SE8 214 aaKnown RBP11.82□□□□□ -0.52
ZFHX3-201ENST00000268489 SLC4A1APQ9BWU0 796 aaKnown RBP11.81□□□□□ -0.52
ZFHX3-201ENST00000268489 NOP58Q9Y2X3 529 aaKnown RBP11.8□□□□□ -0.52
ZFHX3-201ENST00000268489 L1TD1Q5T7N2 865 aaKnown RBP11.8□□□□□ -0.52
ZFHX3-201ENST00000268489 SLC24A1O60721 1099 aa11.79□□□□□ -0.52
ZFHX3-201ENST00000268489 CNGB1Q14028 1251 aaPredicted RBP11.77□□□□□ -0.52
ZFHX3-201ENST00000268489 USP35Q9P2H5 1018 aa11.77□□□□□ -0.53
ZFHX3-201ENST00000268489 CCER2I3L3R5 266 aa11.76□□□□□ -0.53
ZFHX3-201ENST00000268489 MRS2Q9HD23 443 aa11.75□□□□□ -0.53
ZFHX3-201ENST00000268489 ARID4BQ4LE39 1312 aaPredicted RBP11.75□□□□□ -0.53
ZFHX3-201ENST00000268489 TONSLQ96HA7 1378 aa11.74□□□□□ -0.53
ZFHX3-201ENST00000268489 SUPT16HQ9Y5B9 1047 aaKnown RBP11.72□□□□□ -0.53
ZFHX3-201ENST00000268489 DEKP35659 375 aaKnown RBP11.72□□□□□ -0.53
ZFHX3-201ENST00000268489 CHMP4BQ9H444 224 aaKnown RBP11.72□□□□□ -0.53
ZFHX3-201ENST00000268489 PTMSP20962 102 aa11.71□□□□□ -0.54
ZFHX3-201ENST00000268489 EIF4G2P78344 907 aaKnown RBP eCLIP11.7□□□□□ -0.54
ZFHX3-201ENST00000268489 RBM19Q9Y4C8 960 aaKnown RBP11.7□□□□□ -0.54
ZFHX3-201ENST00000268489 FAM9BQ8IZU0 186 aa11.69□□□□□ -0.54
ZFHX3-201ENST00000268489 RSPH6AQ9H0K4 717 aa11.69□□□□□ -0.54
ZFHX3-201ENST00000268489 CFAP44Q96MT7 982 aa11.68□□□□□ -0.54
ZFHX3-201ENST00000268489 CDCA8Q53HL2 280 aa11.66□□□□□ -0.54
ZFHX3-201ENST00000268489 MYH16Q9H6N6 1097 aa11.66□□□□□ -0.54
ZFHX3-201ENST00000268489 MS4A1P11836 297 aa11.65□□□□□ -0.54
ZFHX3-201ENST00000268489 CASC1Q6TDU7 716 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms