RNA–Protein interactions for RNA: ENST00000267257.11

PXN-202, Transcript of paxillin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PXN, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-202ENST00000267257 NISCHQ9Y2I1 1504 aa20.61■□□□□ 0.89
PXN-202ENST00000267257 SHROOM4Q9ULL8 1493 aa18.32■□□□□ 0.52
PXN-202ENST00000267257 SUPT5HO00267 1087 aaKnown RBP18.27■□□□□ 0.51
PXN-202ENST00000267257 DCAF8L2P0C7V8 631 aa18.12■□□□□ 0.49
PXN-202ENST00000267257 CCDC180Q9P1Z9 1646 aa17.58■□□□□ 0.41
PXN-202ENST00000267257 PCGF6Q9BYE7 350 aa17.49■□□□□ 0.39
PXN-202ENST00000267257 CHIC1Q5VXU3 224 aa17.32■□□□□ 0.36
PXN-202ENST00000267257 HRCP23327 699 aa17.29■□□□□ 0.36
PXN-202ENST00000267257 ZCCHC6Q5VYS8 1495 aaKnown RBP17.28■□□□□ 0.36
PXN-202ENST00000267257 PPARGC1BQ86YN6 1023 aaKnown RBP17.18■□□□□ 0.34
PXN-202ENST00000267257 EHMT2Q96KQ7 1210 aa17.14■□□□□ 0.33
PXN-202ENST00000267257 LOC105371045A0A1W2PR82 267 aa17.08■□□□□ 0.32
PXN-202ENST00000267257 FAM9AQ8IZU1 332 aaPredicted RBP17.02■□□□□ 0.32
PXN-202ENST00000267257 ABCC9O60706 1549 aa17.01■□□□□ 0.31
PXN-202ENST00000267257 MYO15BQ96JP2 1530 aa16.92■□□□□ 0.3
PXN-202ENST00000267257 TRIM41Q8WV44 630 aa16.85■□□□□ 0.29
PXN-202ENST00000267257 TRIM26Q12899 539 aaPredicted RBP16.84■□□□□ 0.29
PXN-202ENST00000267257 DCAF1Q9Y4B6 1507 aa16.81■□□□□ 0.28
PXN-202ENST00000267257 ZEB1P37275 1124 aaPredicted RBP16.69■□□□□ 0.26
PXN-202ENST00000267257 TTBK1Q5TCY1 1321 aaPredicted RBP16.62■□□□□ 0.25
PXN-202ENST00000267257 SCRIBQ14160 1630 aa16.6■□□□□ 0.25
PXN-202ENST00000267257 NACADO15069 1562 aa16.53■□□□□ 0.24
PXN-202ENST00000267257 CCER1Q8TC90 406 aaPredicted RBP16.5■□□□□ 0.23
PXN-202ENST00000267257 RB1CC1Q8TDY2 1594 aa16.41■□□□□ 0.22
PXN-202ENST00000267257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.33■□□□□ 0.2
PXN-202ENST00000267257 PELP1Q8IZL8 1130 aaKnown RBP16.31■□□□□ 0.2
PXN-202ENST00000267257 PABPN1Q86U42 306 aaKnown RBP eCLIP16.3■□□□□ 0.2
PXN-202ENST00000267257 CENPBP07199 599 aaPredicted RBP16.23■□□□□ 0.19
PXN-202ENST00000267257 UBTFP17480 764 aaKnown RBP16.22■□□□□ 0.19
PXN-202ENST00000267257 RSF1Q96T23 1441 aaPredicted RBP16.19■□□□□ 0.18
PXN-202ENST00000267257 RANGAP1P46060 587 aaPredicted RBP16.15■□□□□ 0.18
PXN-202ENST00000267257 YTHDC1Q96MU7 727 aaKnown RBP16.13■□□□□ 0.17
PXN-202ENST00000267257 APLP2Q06481 763 aa16.11■□□□□ 0.17
PXN-202ENST00000267257 CECR2Q9BXF3 1484 aa16.11■□□□□ 0.17
PXN-202ENST00000267257 DIEXFQ68CQ4 756 aaKnown RBP16.09■□□□□ 0.17
PXN-202ENST00000267257 SCAF1Q9H7N4 1312 aaKnown RBP16.09■□□□□ 0.17
PXN-202ENST00000267257 HNRNPUL2Q1KMD3 747 aaKnown RBP15.99■□□□□ 0.15
PXN-202ENST00000267257 MROH2BQ7Z745 1585 aa15.98■□□□□ 0.15
PXN-202ENST00000267257 GTF3C3Q9Y5Q9 886 aa15.97■□□□□ 0.15
PXN-202ENST00000267257 ACIN1Q9UKV3 1341 aaKnown RBP15.96■□□□□ 0.15
PXN-202ENST00000267257 BAZ1AQ9NRL2 1556 aaPredicted RBP15.94■□□□□ 0.14
PXN-202ENST00000267257 NEUROD1Q13562 356 aa15.91■□□□□ 0.14
PXN-202ENST00000267257 WIZO95785 1651 aa15.82■□□□□ 0.12
PXN-202ENST00000267257 CSRNP3Q8WYN3 585 aa15.81■□□□□ 0.12
PXN-202ENST00000267257 ZNF316A6NFI3 1004 aaPredicted RBP15.8■□□□□ 0.12
PXN-202ENST00000267257 SMARCA4P51532 1647 aa15.73■□□□□ 0.11
PXN-202ENST00000267257 UNC13AQ9UPW8 1703 aa15.71■□□□□ 0.11
PXN-202ENST00000267257 CEP162Q5TB80 1403 aa15.69■□□□□ 0.1
PXN-202ENST00000267257 BICRAQ9NZM4 1560 aa15.67■□□□□ 0.1
PXN-202ENST00000267257 ITGAEP38570 1179 aa15.67■□□□□ 0.1
PXN-202ENST00000267257 TOP2AP11388 1531 aaKnown RBP15.64■□□□□ 0.09
PXN-202ENST00000267257 CCDC88BA6NC98 1476 aa15.61■□□□□ 0.09
PXN-202ENST00000267257 BAZ1BQ9UIG0 1483 aaKnown RBP15.61■□□□□ 0.09
PXN-202ENST00000267257 MYT1Q01538 1121 aa15.61■□□□□ 0.09
PXN-202ENST00000267257 SOGA1O94964 1423 aa15.59■□□□□ 0.09
PXN-202ENST00000267257 MIER1Q8N108 512 aa15.58■□□□□ 0.08
PXN-202ENST00000267257 ATP1B4Q9UN42 357 aaPredicted RBP15.58■□□□□ 0.08
PXN-202ENST00000267257 ABCC8Q09428 1581 aa15.57■□□□□ 0.08
PXN-202ENST00000267257 TNIKQ9UKE5 1360 aa15.56■□□□□ 0.08
PXN-202ENST00000267257 ATAD2BQ9ULI0 1458 aa15.54■□□□□ 0.08
PXN-202ENST00000267257 SMARCA2P51531 1590 aa15.52■□□□□ 0.08
PXN-202ENST00000267257 GOLGA3Q08378 1498 aa15.47■□□□□ 0.07
PXN-202ENST00000267257 CLIP1P30622 1438 aa15.47■□□□□ 0.07
PXN-202ENST00000267257 EEA1Q15075 1411 aa15.46■□□□□ 0.07
PXN-202ENST00000267257 WRNQ14191 1432 aaPredicted RBP eCLIP15.43■□□□□ 0.06
PXN-202ENST00000267257 RUSC2Q8N2Y8 1516 aa15.39■□□□□ 0.05
PXN-202ENST00000267257 EIF4G1Q04637 1599 aaKnown RBP15.38■□□□□ 0.05
PXN-202ENST00000267257 NEFLP07196 543 aa15.36■□□□□ 0.05
PXN-202ENST00000267257 BCANQ96GW7 911 aa15.34■□□□□ 0.05
PXN-202ENST00000267257 CEP164Q9UPV0 1460 aa15.33■□□□□ 0.04
PXN-202ENST00000267257 PEG3Q9GZU2 1588 aa15.32■□□□□ 0.04
PXN-202ENST00000267257 FAM50AQ14320 339 aaKnown RBP15.32■□□□□ 0.04
PXN-202ENST00000267257 NCAPD3P42695 1498 aa15.3■□□□□ 0.04
PXN-202ENST00000267257 VPS8Q8N3P4 1428 aa15.24■□□□□ 0.03
PXN-202ENST00000267257 P3H3Q8IVL6 736 aa15.21■□□□□ 0.03
PXN-202ENST00000267257 HMGXB3Q12766 1538 aa15.19■□□□□ 0.02
PXN-202ENST00000267257 DDX10Q13206 875 aaKnown RBP15.17■□□□□ 0.02
PXN-202ENST00000267257 KANK4Q5T7N3 995 aaPredicted RBP15.16■□□□□ 0.02
PXN-202ENST00000267257 RAPGEF2Q9Y4G8 1499 aa15.14■□□□□ 0.01
PXN-202ENST00000267257 CLSPNQ9HAW4 1339 aa15.13■□□□□ 0.01
PXN-202ENST00000267257 ERICH6Q7L0X2 663 aa15.13■□□□□ 0.01
PXN-202ENST00000267257 FKBP8Q14318 412 aa15.12■□□□□ 0.01
PXN-202ENST00000267257 SUPT16HQ9Y5B9 1047 aaKnown RBP15.12■□□□□ 0.01
PXN-202ENST00000267257 CADPSQ9ULU8 1353 aa15.11■□□□□ 0.01
PXN-202ENST00000267257 HIRIP3Q9BW71 556 aaPredicted RBP15.11■□□□□ 0.01
PXN-202ENST00000267257 CC2D2AQ9P2K1 1620 aa15.1■□□□□ 0.01
PXN-202ENST00000267257 ANP32CO43423 234 aa15.09■□□□□ 0.01
PXN-202ENST00000267257 TRIM52Q96A61 297 aa15.06■□□□□ 0
PXN-202ENST00000267257 SYNJ1O43426 1573 aa15.05■□□□□ 0
PXN-202ENST00000267257 CFTRP13569 1480 aa15.05■□□□□ -0
PXN-202ENST00000267257 DHX57Q6P158 1386 aaKnown RBP15.04■□□□□ -0
PXN-202ENST00000267257 CCNB3Q8WWL7 1395 aa15.03■□□□□ -0
PXN-202ENST00000267257 CNGB1Q14028 1251 aaPredicted RBP15.03■□□□□ -0
PXN-202ENST00000267257 KIF27Q86VH2 1401 aa15.03■□□□□ -0
PXN-202ENST00000267257 SIN3AQ96ST3 1273 aa15.02■□□□□ -0
PXN-202ENST00000267257 KCNH8Q96L42 1107 aa15□□□□□ -0.01
PXN-202ENST00000267257 POLR3GLQ9BT43 218 aa14.95□□□□□ -0.02
PXN-202ENST00000267257 KIF21BO75037 1637 aa14.94□□□□□ -0.02
PXN-202ENST00000267257 TONSLQ96HA7 1378 aa14.94□□□□□ -0.02
PXN-202ENST00000267257 FANCD2Q9BXW9 1451 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms