RNA–Protein interactions for RNA: ENST00000266542.8

C1RL-201, Transcript of complement C1r subcomponent like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1RL, Length 3,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-201ENST00000266542 NISCHQ9Y2I1 1504 aa26.04■■□□□ 1.76
C1RL-201ENST00000266542 SHROOM4Q9ULL8 1493 aa22.26■■□□□ 1.15
C1RL-201ENST00000266542 ZCCHC6Q5VYS8 1495 aaKnown RBP22.13■■□□□ 1.13
C1RL-201ENST00000266542 SUPT5HO00267 1087 aaKnown RBP22.06■■□□□ 1.12
C1RL-201ENST00000266542 CCDC180Q9P1Z9 1646 aa21.99■■□□□ 1.11
C1RL-201ENST00000266542 HRCP23327 699 aa21.87■■□□□ 1.09
C1RL-201ENST00000266542 CHIC1Q5VXU3 224 aa21.8■■□□□ 1.08
C1RL-201ENST00000266542 MYO15BQ96JP2 1530 aa21.8■■□□□ 1.08
C1RL-201ENST00000266542 DCAF1Q9Y4B6 1507 aa21.48■■□□□ 1.03
C1RL-201ENST00000266542 PCGF6Q9BYE7 350 aa21.44■■□□□ 1.02
C1RL-201ENST00000266542 PPARGC1BQ86YN6 1023 aaKnown RBP21.19■□□□□ 0.98
C1RL-201ENST00000266542 DCAF8L2P0C7V8 631 aa21.18■□□□□ 0.98
C1RL-201ENST00000266542 LOC105371045A0A1W2PR82 267 aa21.07■□□□□ 0.96
C1RL-201ENST00000266542 TRIM26Q12899 539 aaPredicted RBP21.06■□□□□ 0.96
C1RL-201ENST00000266542 ABCC9O60706 1549 aa20.95■□□□□ 0.94
C1RL-201ENST00000266542 ZEB1P37275 1124 aaPredicted RBP20.85■□□□□ 0.93
C1RL-201ENST00000266542 RSF1Q96T23 1441 aaPredicted RBP20.76■□□□□ 0.91
C1RL-201ENST00000266542 RB1CC1Q8TDY2 1594 aa20.63■□□□□ 0.89
C1RL-201ENST00000266542 PELP1Q8IZL8 1130 aaKnown RBP20.6■□□□□ 0.89
C1RL-201ENST00000266542 TRIM41Q8WV44 630 aa20.59■□□□□ 0.89
C1RL-201ENST00000266542 SCRIBQ14160 1630 aa20.53■□□□□ 0.88
C1RL-201ENST00000266542 SCAF1Q9H7N4 1312 aaKnown RBP20.36■□□□□ 0.85
C1RL-201ENST00000266542 FAM9AQ8IZU1 332 aaPredicted RBP20.32■□□□□ 0.84
C1RL-201ENST00000266542 NACADO15069 1562 aa20.22■□□□□ 0.83
C1RL-201ENST00000266542 MROH2BQ7Z745 1585 aa20.22■□□□□ 0.83
C1RL-201ENST00000266542 CECR2Q9BXF3 1484 aa20.22■□□□□ 0.83
C1RL-201ENST00000266542 EIF4G1Q04637 1599 aaKnown RBP20.14■□□□□ 0.82
C1RL-201ENST00000266542 WIZO95785 1651 aa20.12■□□□□ 0.81
C1RL-201ENST00000266542 BAZ1AQ9NRL2 1556 aaPredicted RBP20.1■□□□□ 0.81
C1RL-201ENST00000266542 ACIN1Q9UKV3 1341 aaKnown RBP20.07■□□□□ 0.8
C1RL-201ENST00000266542 WRNQ14191 1432 aaPredicted RBP eCLIP20.05■□□□□ 0.8
C1RL-201ENST00000266542 EHMT2Q96KQ7 1210 aa20.01■□□□□ 0.79
C1RL-201ENST00000266542 CCER1Q8TC90 406 aaPredicted RBP20.01■□□□□ 0.79
C1RL-201ENST00000266542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20■□□□□ 0.79
C1RL-201ENST00000266542 NEUROD1Q13562 356 aa19.94■□□□□ 0.78
C1RL-201ENST00000266542 DIEXFQ68CQ4 756 aaKnown RBP19.9■□□□□ 0.78
C1RL-201ENST00000266542 TOP2AP11388 1531 aaKnown RBP19.87■□□□□ 0.77
C1RL-201ENST00000266542 CENPBP07199 599 aaPredicted RBP19.87■□□□□ 0.77
C1RL-201ENST00000266542 TNIKQ9UKE5 1360 aa19.84■□□□□ 0.77
C1RL-201ENST00000266542 CEP162Q5TB80 1403 aa19.83■□□□□ 0.77
C1RL-201ENST00000266542 CCDC88BA6NC98 1476 aa19.82■□□□□ 0.76
C1RL-201ENST00000266542 EEA1Q15075 1411 aa19.8■□□□□ 0.76
C1RL-201ENST00000266542 ABCC8Q09428 1581 aa19.77■□□□□ 0.76
C1RL-201ENST00000266542 GTF3C3Q9Y5Q9 886 aa19.77■□□□□ 0.76
C1RL-201ENST00000266542 SMARCA2P51531 1590 aa19.76■□□□□ 0.75
C1RL-201ENST00000266542 SMARCA4P51532 1647 aa19.73■□□□□ 0.75
C1RL-201ENST00000266542 MYT1Q01538 1121 aa19.73■□□□□ 0.75
C1RL-201ENST00000266542 SOGA1O94964 1423 aa19.7■□□□□ 0.74
C1RL-201ENST00000266542 ZNF316A6NFI3 1004 aaPredicted RBP19.69■□□□□ 0.74
C1RL-201ENST00000266542 CSRNP3Q8WYN3 585 aa19.66■□□□□ 0.74
C1RL-201ENST00000266542 GOLGA3Q08378 1498 aa19.62■□□□□ 0.73
C1RL-201ENST00000266542 RUSC2Q8N2Y8 1516 aa19.57■□□□□ 0.72
C1RL-201ENST00000266542 UBTFP17480 764 aaKnown RBP19.51■□□□□ 0.71
C1RL-201ENST00000266542 TTBK1Q5TCY1 1321 aaPredicted RBP19.51■□□□□ 0.71
C1RL-201ENST00000266542 KIF21BO75037 1637 aa19.49■□□□□ 0.71
C1RL-201ENST00000266542 CEP164Q9UPV0 1460 aa19.47■□□□□ 0.71
C1RL-201ENST00000266542 UNC13AQ9UPW8 1703 aa19.46■□□□□ 0.71
C1RL-201ENST00000266542 PEG3Q9GZU2 1588 aa19.42■□□□□ 0.7
C1RL-201ENST00000266542 MIER1Q8N108 512 aa19.41■□□□□ 0.7
C1RL-201ENST00000266542 BAZ1BQ9UIG0 1483 aaKnown RBP19.39■□□□□ 0.7
C1RL-201ENST00000266542 VPS8Q8N3P4 1428 aa19.39■□□□□ 0.69
C1RL-201ENST00000266542 CLIP1P30622 1438 aa19.37■□□□□ 0.69
C1RL-201ENST00000266542 SYNJ1O43426 1573 aa19.34■□□□□ 0.69
C1RL-201ENST00000266542 CLSPNQ9HAW4 1339 aa19.31■□□□□ 0.68
C1RL-201ENST00000266542 HNRNPUL2Q1KMD3 747 aaKnown RBP19.3■□□□□ 0.68
C1RL-201ENST00000266542 YTHDC1Q96MU7 727 aaKnown RBP19.3■□□□□ 0.68
C1RL-201ENST00000266542 BICRAQ9NZM4 1560 aa19.23■□□□□ 0.67
C1RL-201ENST00000266542 RAPGEF2Q9Y4G8 1499 aa19.21■□□□□ 0.67
C1RL-201ENST00000266542 APLP2Q06481 763 aa19.19■□□□□ 0.66
C1RL-201ENST00000266542 DHX57Q6P158 1386 aaKnown RBP19.15■□□□□ 0.66
C1RL-201ENST00000266542 ATAD2BQ9ULI0 1458 aa19.12■□□□□ 0.65
C1RL-201ENST00000266542 TOP2BQ02880 1626 aa19.12■□□□□ 0.65
C1RL-201ENST00000266542 ERICH3Q5RHP9 1530 aa19.12■□□□□ 0.65
C1RL-201ENST00000266542 PRXQ9BXM0 1461 aa19.07■□□□□ 0.64
C1RL-201ENST00000266542 CUX2O14529 1486 aa19.06■□□□□ 0.64
C1RL-201ENST00000266542 BIVM-ERCC5R4GMW8 1640 aa19.06■□□□□ 0.64
C1RL-201ENST00000266542 ARAP1Q96P48 1450 aa19.05■□□□□ 0.64
C1RL-201ENST00000266542 RRBP1Q9P2E9 1410 aaKnown RBP19.05■□□□□ 0.64
C1RL-201ENST00000266542 PABPN1Q86U42 306 aaKnown RBP eCLIP19.01■□□□□ 0.63
C1RL-201ENST00000266542 SUPT16HQ9Y5B9 1047 aaKnown RBP19■□□□□ 0.63
C1RL-201ENST00000266542 KANK4Q5T7N3 995 aaPredicted RBP18.93■□□□□ 0.62
C1RL-201ENST00000266542 CCNB3Q8WWL7 1395 aa18.87■□□□□ 0.61
C1RL-201ENST00000266542 RANGAP1P46060 587 aaPredicted RBP18.86■□□□□ 0.61
C1RL-201ENST00000266542 KIF27Q86VH2 1401 aa18.83■□□□□ 0.6
C1RL-201ENST00000266542 TSHZ2Q9NRE2 1034 aa18.81■□□□□ 0.6
C1RL-201ENST00000266542 ARHGAP35Q9NRY4 1499 aa18.81■□□□□ 0.6
C1RL-201ENST00000266542 MAP3K1Q13233 1512 aa18.81■□□□□ 0.6
C1RL-201ENST00000266542 CUX1P39880 1505 aa18.81■□□□□ 0.6
C1RL-201ENST00000266542 MAPKBP1O60336 1514 aa18.78■□□□□ 0.6
C1RL-201ENST00000266542 HMGXB3Q12766 1538 aa18.75■□□□□ 0.59
C1RL-201ENST00000266542 RAB3GAP2Q9H2M9 1393 aa18.73■□□□□ 0.59
C1RL-201ENST00000266542 NCAPD3P42695 1498 aa18.72■□□□□ 0.59
C1RL-201ENST00000266542 TIAM1Q13009 1591 aa18.69■□□□□ 0.58
C1RL-201ENST00000266542 SETD5Q9C0A6 1442 aa18.68■□□□□ 0.58
C1RL-201ENST00000266542 ANP32EQ9BTT0 268 aa18.68■□□□□ 0.58
C1RL-201ENST00000266542 CFTRP13569 1480 aa18.67■□□□□ 0.58
C1RL-201ENST00000266542 TIMELESSQ9UNS1 1208 aa18.67■□□□□ 0.58
C1RL-201ENST00000266542 KCNH8Q96L42 1107 aa18.64■□□□□ 0.57
C1RL-201ENST00000266542 LRRC9Q6ZRR7 1453 aa18.62■□□□□ 0.57
C1RL-201ENST00000266542 WDR97A6NE52 1622 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms