RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 PELP1Q8IZL8 1130 aaKnown RBP9.2□□□□□ -0.94
XRN1-201ENST00000264951 MYT1Q01538 1121 aa8.96□□□□□ -0.98
XRN1-201ENST00000264951 CCER1Q8TC90 406 aaPredicted RBP8.72□□□□□ -1.01
XRN1-201ENST00000264951 ERICH6Q7L0X2 663 aa8.53□□□□□ -1.04
XRN1-201ENST00000264951 CENPBP07199 599 aaPredicted RBP8.51□□□□□ -1.05
XRN1-201ENST00000264951 YTHDC1Q96MU7 727 aaKnown RBP8.5□□□□□ -1.05
XRN1-201ENST00000264951 DCAF8L2P0C7V8 631 aa8.45□□□□□ -1.06
XRN1-201ENST00000264951 ZEB1P37275 1124 aaPredicted RBP8.43□□□□□ -1.06
XRN1-201ENST00000264951 APLP2Q06481 763 aa8.39□□□□□ -1.07
XRN1-201ENST00000264951 FAM9AQ8IZU1 332 aaPredicted RBP8.37□□□□□ -1.07
XRN1-201ENST00000264951 NEFLP07196 543 aa8.3□□□□□ -1.08
XRN1-201ENST00000264951 TTBK1Q5TCY1 1321 aaPredicted RBP8.28□□□□□ -1.08
XRN1-201ENST00000264951 SUPT5HO00267 1087 aaKnown RBP8.2□□□□□ -1.1
XRN1-201ENST00000264951 NISCHQ9Y2I1 1504 aa8.18□□□□□ -1.1
XRN1-201ENST00000264951 DAXXQ9UER7 740 aaPredicted RBP8.16□□□□□ -1.1
XRN1-201ENST00000264951 RTL5Q5HYW3 569 aaPredicted RBP8.02□□□□□ -1.13
XRN1-201ENST00000264951 PCGF6Q9BYE7 350 aa7.97□□□□□ -1.13
XRN1-201ENST00000264951 ZNF316A6NFI3 1004 aaPredicted RBP7.89□□□□□ -1.15
XRN1-201ENST00000264951 GLIPR1L2Q4G1C9 344 aa7.88□□□□□ -1.15
XRN1-201ENST00000264951 MYT1LQ9UL68 1186 aa7.87□□□□□ -1.15
XRN1-201ENST00000264951 CLSPNQ9HAW4 1339 aa7.81□□□□□ -1.16
XRN1-201ENST00000264951 TRIM26Q12899 539 aaPredicted RBP7.78□□□□□ -1.16
XRN1-201ENST00000264951 TRIM41Q8WV44 630 aa7.76□□□□□ -1.17
XRN1-201ENST00000264951 SHROOM4Q9ULL8 1493 aa7.76□□□□□ -1.17
XRN1-201ENST00000264951 EHMT2Q96KQ7 1210 aa7.74□□□□□ -1.17
XRN1-201ENST00000264951 HRCP23327 699 aa7.72□□□□□ -1.17
XRN1-201ENST00000264951 UBTFP17480 764 aaKnown RBP7.71□□□□□ -1.18
XRN1-201ENST00000264951 ANP32BQ92688 251 aaKnown RBP7.71□□□□□ -1.18
XRN1-201ENST00000264951 ZBTB47Q9UFB7 747 aaPredicted RBP7.67□□□□□ -1.18
XRN1-201ENST00000264951 CDK11AQ9UQ88 783 aaPredicted RBP7.67□□□□□ -1.18
XRN1-201ENST00000264951 NEFMP07197 916 aa7.64□□□□□ -1.19
XRN1-201ENST00000264951 ANP32AP39687 249 aaKnown RBP7.62□□□□□ -1.19
XRN1-201ENST00000264951 ATP1B4Q9UN42 357 aaPredicted RBP7.62□□□□□ -1.19
XRN1-201ENST00000264951 DIEXFQ68CQ4 756 aaKnown RBP7.57□□□□□ -1.2
XRN1-201ENST00000264951 ANP32EQ9BTT0 268 aa7.56□□□□□ -1.2
XRN1-201ENST00000264951 TNNT2P45379 298 aaPredicted RBP7.54□□□□□ -1.2
XRN1-201ENST00000264951 UPF2Q9HAU5 1272 aaKnown RBP7.52□□□□□ -1.21
XRN1-201ENST00000264951 ANP32CO43423 234 aa7.51□□□□□ -1.21
XRN1-201ENST00000264951 EIF5BO60841 1220 aaKnown RBP7.5□□□□□ -1.21
XRN1-201ENST00000264951 POLR3GLQ9BT43 218 aa7.48□□□□□ -1.21
XRN1-201ENST00000264951 TRIM44Q96DX7 344 aaPredicted RBP7.48□□□□□ -1.21
XRN1-201ENST00000264951 RANGAP1P46060 587 aaPredicted RBP7.48□□□□□ -1.21
XRN1-201ENST00000264951 NCLP19338 710 aaKnown RBP7.45□□□□□ -1.22
XRN1-201ENST00000264951 CANXP27824 592 aaKnown RBP7.45□□□□□ -1.22
XRN1-201ENST00000264951 HSP90AA1P07900 732 aaKnown RBP7.44□□□□□ -1.22
XRN1-201ENST00000264951 GTF3C3Q9Y5Q9 886 aa7.43□□□□□ -1.22
XRN1-201ENST00000264951 CDK11BP21127 795 aaKnown RBP7.41□□□□□ -1.22
XRN1-201ENST00000264951 SLC4A1APQ9BWU0 796 aaKnown RBP7.39□□□□□ -1.23
XRN1-201ENST00000264951 ERICH6BQ5W0A0 696 aa7.39□□□□□ -1.23
XRN1-201ENST00000264951 ACIN1Q9UKV3 1341 aaKnown RBP7.39□□□□□ -1.23
XRN1-201ENST00000264951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.38□□□□□ -1.23
XRN1-201ENST00000264951 HNRNPUL2Q1KMD3 747 aaKnown RBP7.38□□□□□ -1.23
XRN1-201ENST00000264951 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.36□□□□□ -1.23
XRN1-201ENST00000264951 GOLGA6L22H0YM25 854 aa7.35□□□□□ -1.23
XRN1-201ENST00000264951 DDRGK1Q96HY6 314 aa7.34□□□□□ -1.23
XRN1-201ENST00000264951 ITGAEP38570 1179 aa7.34□□□□□ -1.23
XRN1-201ENST00000264951 BECN1Q14457 450 aa7.33□□□□□ -1.24
XRN1-201ENST00000264951 NRDCO43847 1150 aa7.3□□□□□ -1.24
XRN1-201ENST00000264951 BCANQ96GW7 911 aa7.28□□□□□ -1.24
XRN1-201ENST00000264951 L1TD1Q5T7N2 865 aaKnown RBP7.28□□□□□ -1.24
XRN1-201ENST00000264951 PPM1GO15355 546 aaPredicted RBP7.27□□□□□ -1.24
XRN1-201ENST00000264951 TRIM52Q96A61 297 aa7.27□□□□□ -1.25
XRN1-201ENST00000264951 ARID4BQ4LE39 1312 aaPredicted RBP7.27□□□□□ -1.25
XRN1-201ENST00000264951 GOLGA6L6A8MZA4 724 aa7.26□□□□□ -1.25
XRN1-201ENST00000264951 NEUROD1Q13562 356 aa7.26□□□□□ -1.25
XRN1-201ENST00000264951 CHIC1Q5VXU3 224 aa7.25□□□□□ -1.25
XRN1-201ENST00000264951 ZRSR1Q15695 479 aaKnown RBP7.25□□□□□ -1.25
XRN1-201ENST00000264951 MYH16Q9H6N6 1097 aa7.25□□□□□ -1.25
XRN1-201ENST00000264951 FAM50AQ14320 339 aaKnown RBP7.24□□□□□ -1.25
XRN1-201ENST00000264951 CCDC136Q96JN2 1154 aa7.24□□□□□ -1.25
XRN1-201ENST00000264951 NPM2Q86SE8 214 aaKnown RBP7.23□□□□□ -1.25
XRN1-201ENST00000264951 CHAF1AQ13111 956 aaPredicted RBP7.22□□□□□ -1.25
XRN1-201ENST00000264951 USP35Q9P2H5 1018 aa7.22□□□□□ -1.25
XRN1-201ENST00000264951 CNGB1Q14028 1251 aaPredicted RBP7.21□□□□□ -1.25
XRN1-201ENST00000264951 PPARGC1BQ86YN6 1023 aaKnown RBP7.21□□□□□ -1.26
XRN1-201ENST00000264951 CHMP4BQ9H444 224 aaKnown RBP7.2□□□□□ -1.26
XRN1-201ENST00000264951 CFAP44Q96MT7 982 aa7.19□□□□□ -1.26
XRN1-201ENST00000264951 PTMAP06454 111 aaKnown RBP7.19□□□□□ -1.26
XRN1-201ENST00000264951 PTMSP20962 102 aa7.19□□□□□ -1.26
XRN1-201ENST00000264951 FKBP8Q14318 412 aa7.18□□□□□ -1.26
XRN1-201ENST00000264951 CASC1Q6TDU7 716 aa7.18□□□□□ -1.26
XRN1-201ENST00000264951 TONSLQ96HA7 1378 aa7.18□□□□□ -1.26
XRN1-201ENST00000264951 DNTTIP2Q5QJE6 756 aaKnown RBP7.16□□□□□ -1.26
XRN1-201ENST00000264951 SLC24A1O60721 1099 aa7.15□□□□□ -1.26
XRN1-201ENST00000264951 HNRNPUQ00839 825 aaKnown RBP eCLIP7.15□□□□□ -1.27
XRN1-201ENST00000264951 ZNF326Q5BKZ1 582 aaKnown RBP7.15□□□□□ -1.27
XRN1-201ENST00000264951 MS4A1P11836 297 aa7.12□□□□□ -1.27
XRN1-201ENST00000264951 NBR1Q14596 966 aa7.12□□□□□ -1.27
XRN1-201ENST00000264951 TMC1Q8TDI8 760 aa7.12□□□□□ -1.27
XRN1-201ENST00000264951 NAP1L5Q96NT1 182 aaPredicted RBP7.12□□□□□ -1.27
XRN1-201ENST00000264951 WDR43Q15061 677 aaKnown RBP eCLIP7.12□□□□□ -1.27
XRN1-201ENST00000264951 LOC105371045A0A1W2PR82 267 aa7.1□□□□□ -1.27
XRN1-201ENST00000264951 DCAF1Q9Y4B6 1507 aa7.1□□□□□ -1.27
XRN1-201ENST00000264951 MSNP26038 577 aaKnown RBP7.09□□□□□ -1.27
XRN1-201ENST00000264951 TNNT3P45378 269 aaPredicted RBP7.08□□□□□ -1.28
XRN1-201ENST00000264951 CDCA8Q53HL2 280 aa7.07□□□□□ -1.28
XRN1-201ENST00000264951 HAP1P54257 671 aaPredicted RBP7.06□□□□□ -1.28
XRN1-201ENST00000264951 KIAA2012Q0VF49 1180 aa7.05□□□□□ -1.28
XRN1-201ENST00000264951 ESF1Q9H501 851 aaKnown RBP7.05□□□□□ -1.28
XRN1-201ENST00000264951 CCDC34Q96HJ3 373 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms