RNA–Protein interactions for RNA: ENST00000263688.3

SUCO-201, Transcript of SUN domain containing ossification factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUCO, Length 5,556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCO-201ENST00000263688 NISCHQ9Y2I1 1504 aa24.9■■□□□ 1.58
SUCO-201ENST00000263688 DCAF8L2P0C7V8 631 aa24.88■■□□□ 1.57
SUCO-201ENST00000263688 SUPT5HO00267 1087 aaKnown RBP23.51■■□□□ 1.35
SUCO-201ENST00000263688 SHROOM4Q9ULL8 1493 aa23.23■■□□□ 1.31
SUCO-201ENST00000263688 APLP2Q06481 763 aa22.44■■□□□ 1.18
SUCO-201ENST00000263688 FAM9AQ8IZU1 332 aaPredicted RBP22.36■■□□□ 1.17
SUCO-201ENST00000263688 EHMT2Q96KQ7 1210 aa22.32■■□□□ 1.16
SUCO-201ENST00000263688 TRIM41Q8WV44 630 aa22.01■■□□□ 1.11
SUCO-201ENST00000263688 PELP1Q8IZL8 1130 aaKnown RBP21.82■■□□□ 1.08
SUCO-201ENST00000263688 UBTFP17480 764 aaKnown RBP21.66■■□□□ 1.06
SUCO-201ENST00000263688 ZEB1P37275 1124 aaPredicted RBP21.63■■□□□ 1.05
SUCO-201ENST00000263688 PCGF6Q9BYE7 350 aa21.6■■□□□ 1.05
SUCO-201ENST00000263688 RANGAP1P46060 587 aaPredicted RBP21.58■■□□□ 1.04
SUCO-201ENST00000263688 TTBK1Q5TCY1 1321 aaPredicted RBP21.57■■□□□ 1.04
SUCO-201ENST00000263688 ATP1B4Q9UN42 357 aaPredicted RBP21.53■■□□□ 1.04
SUCO-201ENST00000263688 CCER1Q8TC90 406 aaPredicted RBP21.39■■□□□ 1.01
SUCO-201ENST00000263688 ABCC9O60706 1549 aa21.28■■□□□ 1
SUCO-201ENST00000263688 CENPBP07199 599 aaPredicted RBP21.18■□□□□ 0.98
SUCO-201ENST00000263688 CHIC1Q5VXU3 224 aa21.08■□□□□ 0.97
SUCO-201ENST00000263688 TRIM26Q12899 539 aaPredicted RBP21.07■□□□□ 0.96
SUCO-201ENST00000263688 PABPN1Q86U42 306 aaKnown RBP eCLIP20.96■□□□□ 0.95
SUCO-201ENST00000263688 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.93■□□□□ 0.94
SUCO-201ENST00000263688 HNRNPUL2Q1KMD3 747 aaKnown RBP20.93■□□□□ 0.94
SUCO-201ENST00000263688 PPARGC1BQ86YN6 1023 aaKnown RBP20.84■□□□□ 0.93
SUCO-201ENST00000263688 LOC105371045A0A1W2PR82 267 aa20.78■□□□□ 0.92
SUCO-201ENST00000263688 MYT1LQ9UL68 1186 aa20.78■□□□□ 0.92
SUCO-201ENST00000263688 NEFLP07196 543 aa20.76■□□□□ 0.91
SUCO-201ENST00000263688 CCDC180Q9P1Z9 1646 aa20.72■□□□□ 0.91
SUCO-201ENST00000263688 ITGAEP38570 1179 aa20.71■□□□□ 0.91
SUCO-201ENST00000263688 ERICH6Q7L0X2 663 aa20.64■□□□□ 0.9
SUCO-201ENST00000263688 ZCCHC6Q5VYS8 1495 aaKnown RBP20.64■□□□□ 0.89
SUCO-201ENST00000263688 HRCP23327 699 aa20.55■□□□□ 0.88
SUCO-201ENST00000263688 YTHDC1Q96MU7 727 aaKnown RBP20.48■□□□□ 0.87
SUCO-201ENST00000263688 SCRIBQ14160 1630 aa20.48■□□□□ 0.87
SUCO-201ENST00000263688 FAM50AQ14320 339 aaKnown RBP20.41■□□□□ 0.86
SUCO-201ENST00000263688 POLR3GLQ9BT43 218 aa20.37■□□□□ 0.85
SUCO-201ENST00000263688 CSRNP3Q8WYN3 585 aa20.32■□□□□ 0.84
SUCO-201ENST00000263688 TRIM52Q96A61 297 aa20.27■□□□□ 0.84
SUCO-201ENST00000263688 RB1CC1Q8TDY2 1594 aa20.27■□□□□ 0.84
SUCO-201ENST00000263688 FBLN2P98095 1184 aa20.27■□□□□ 0.84
SUCO-201ENST00000263688 CDK11AQ9UQ88 783 aaPredicted RBP20.13■□□□□ 0.81
SUCO-201ENST00000263688 NACADO15069 1562 aa20.12■□□□□ 0.81
SUCO-201ENST00000263688 SLC4A1APQ9BWU0 796 aaKnown RBP20.09■□□□□ 0.81
SUCO-201ENST00000263688 DIEXFQ68CQ4 756 aaKnown RBP20.06■□□□□ 0.8
SUCO-201ENST00000263688 DAXXQ9UER7 740 aaPredicted RBP20.03■□□□□ 0.8
SUCO-201ENST00000263688 NEUROD1Q13562 356 aa20.03■□□□□ 0.8
SUCO-201ENST00000263688 P3H3Q8IVL6 736 aa19.99■□□□□ 0.79
SUCO-201ENST00000263688 CNGB1Q14028 1251 aaPredicted RBP19.96■□□□□ 0.79
SUCO-201ENST00000263688 MYT1Q01538 1121 aa19.93■□□□□ 0.78
SUCO-201ENST00000263688 ANP32CO43423 234 aa19.88■□□□□ 0.77
SUCO-201ENST00000263688 DCAF1Q9Y4B6 1507 aa19.88■□□□□ 0.77
SUCO-201ENST00000263688 ZNF326Q5BKZ1 582 aaKnown RBP19.86■□□□□ 0.77
SUCO-201ENST00000263688 ZNF777Q9ULD5 760 aaPredicted RBP19.82■□□□□ 0.76
SUCO-201ENST00000263688 EEA1Q15075 1411 aa19.82■□□□□ 0.76
SUCO-201ENST00000263688 NPM1P06748 294 aaKnown RBP eCLIP19.81■□□□□ 0.76
SUCO-201ENST00000263688 ARID3CA6NKF2 412 aa19.81■□□□□ 0.76
SUCO-201ENST00000263688 RSF1Q96T23 1441 aaPredicted RBP19.8■□□□□ 0.76
SUCO-201ENST00000263688 ZNF316A6NFI3 1004 aaPredicted RBP19.79■□□□□ 0.76
SUCO-201ENST00000263688 BAZ1BQ9UIG0 1483 aaKnown RBP19.75■□□□□ 0.75
SUCO-201ENST00000263688 ESF1Q9H501 851 aaKnown RBP19.69■□□□□ 0.74
SUCO-201ENST00000263688 CLSPNQ9HAW4 1339 aa19.69■□□□□ 0.74
SUCO-201ENST00000263688 CHMP7Q8WUX9 453 aaPredicted RBP19.68■□□□□ 0.74
SUCO-201ENST00000263688 BAZ1AQ9NRL2 1556 aaPredicted RBP19.68■□□□□ 0.74
SUCO-201ENST00000263688 NEFMP07197 916 aa19.65■□□□□ 0.74
SUCO-201ENST00000263688 BCANQ96GW7 911 aa19.65■□□□□ 0.74
SUCO-201ENST00000263688 TONSLQ96HA7 1378 aa19.64■□□□□ 0.73
SUCO-201ENST00000263688 CLIP1P30622 1438 aa19.62■□□□□ 0.73
SUCO-201ENST00000263688 WRNQ14191 1432 aaPredicted RBP eCLIP19.62■□□□□ 0.73
SUCO-201ENST00000263688 GOLGA3Q08378 1498 aa19.61■□□□□ 0.73
SUCO-201ENST00000263688 MTUS2Q5JR59 1369 aa19.6■□□□□ 0.73
SUCO-201ENST00000263688 ACIN1Q9UKV3 1341 aaKnown RBP19.6■□□□□ 0.73
SUCO-201ENST00000263688 TSPY4P0CV99 314 aa19.56■□□□□ 0.72
SUCO-201ENST00000263688 TSPY10P0CW01 314 aa19.56■□□□□ 0.72
SUCO-201ENST00000263688 ZBTB47Q9UFB7 747 aaPredicted RBP19.55■□□□□ 0.72
SUCO-201ENST00000263688 KIF27Q86VH2 1401 aa19.55■□□□□ 0.72
SUCO-201ENST00000263688 STAG3Q9UJ98 1225 aa19.51■□□□□ 0.71
SUCO-201ENST00000263688 CEP164Q9UPV0 1460 aa19.46■□□□□ 0.71
SUCO-201ENST00000263688 CANXP27824 592 aaKnown RBP19.45■□□□□ 0.7
SUCO-201ENST00000263688 RTL5Q5HYW3 569 aaPredicted RBP19.45■□□□□ 0.7
SUCO-201ENST00000263688 CHGAP10645 457 aaKnown RBP19.44■□□□□ 0.7
SUCO-201ENST00000263688 CEP162Q5TB80 1403 aa19.42■□□□□ 0.7
SUCO-201ENST00000263688 TNIKQ9UKE5 1360 aa19.41■□□□□ 0.7
SUCO-201ENST00000263688 CHIC2Q9UKJ5 165 aa19.41■□□□□ 0.7
SUCO-201ENST00000263688 PLEKHD1A6NEE1 506 aa19.41■□□□□ 0.7
SUCO-201ENST00000263688 MYO15BQ96JP2 1530 aa19.37■□□□□ 0.69
SUCO-201ENST00000263688 ERCC6Q03468 1493 aa19.36■□□□□ 0.69
SUCO-201ENST00000263688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.35■□□□□ 0.693e-6■■□□□ 13.8
SUCO-201ENST00000263688 CECR2Q9BXF3 1484 aa19.34■□□□□ 0.69
SUCO-201ENST00000263688 GTF3C3Q9Y5Q9 886 aa19.33■□□□□ 0.68
SUCO-201ENST00000263688 SMARCA2P51531 1590 aa19.32■□□□□ 0.68
SUCO-201ENST00000263688 SLC24A1O60721 1099 aa19.31■□□□□ 0.68
SUCO-201ENST00000263688 FHAD1B1AJZ9 1412 aa19.22■□□□□ 0.67
SUCO-201ENST00000263688 CFDP1Q9UEE9 299 aaPredicted RBP19.2■□□□□ 0.66
SUCO-201ENST00000263688 KCNH8Q96L42 1107 aa19.2■□□□□ 0.66
SUCO-201ENST00000263688 DDX10Q13206 875 aaKnown RBP19.2■□□□□ 0.66
SUCO-201ENST00000263688 RRP7BPQ9NSQ0 103 aa19.18■□□□□ 0.66
SUCO-201ENST00000263688 CARMIL1Q5VZK9 1371 aa19.17■□□□□ 0.66
SUCO-201ENST00000263688 PDS5BQ9NTI5 1447 aa19.16■□□□□ 0.66
SUCO-201ENST00000263688 EIF4G2P78344 907 aaKnown RBP eCLIP19.16■□□□□ 0.668e-7■■■□□ 16.1
SUCO-201ENST00000263688 MROH2BQ7Z745 1585 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms