RNA–Protein interactions for RNA: ENST00000263681.6

POLD3-201, Transcript of DNA polymerase delta 3, accessory subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLD3, Length 3,821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLD3-201ENST00000263681 NISCHQ9Y2I1 1504 aa17.08■□□□□ 0.32
POLD3-201ENST00000263681 SHROOM4Q9ULL8 1493 aa15.95■□□□□ 0.14
POLD3-201ENST00000263681 SUPT5HO00267 1087 aaKnown RBP15.9■□□□□ 0.14
POLD3-201ENST00000263681 DCAF8L2P0C7V8 631 aa15.52■□□□□ 0.07
POLD3-201ENST00000263681 PCGF6Q9BYE7 350 aa15.5■□□□□ 0.07
POLD3-201ENST00000263681 PPARGC1BQ86YN6 1023 aaKnown RBP15.38■□□□□ 0.05
POLD3-201ENST00000263681 HRCP23327 699 aa15.32■□□□□ 0.04
POLD3-201ENST00000263681 EHMT2Q96KQ7 1210 aa15.11■□□□□ 0.01
POLD3-201ENST00000263681 CHIC1Q5VXU3 224 aa15.1■□□□□ 0.01
POLD3-201ENST00000263681 LOC105371045A0A1W2PR82 267 aa15.04■□□□□ -0
POLD3-201ENST00000263681 MYO15BQ96JP2 1530 aa14.97□□□□□ -0.01
POLD3-201ENST00000263681 FAM9AQ8IZU1 332 aaPredicted RBP14.87□□□□□ -0.03
POLD3-201ENST00000263681 TRIM26Q12899 539 aaPredicted RBP14.7□□□□□ -0.06
POLD3-201ENST00000263681 TTBK1Q5TCY1 1321 aaPredicted RBP14.65□□□□□ -0.06
POLD3-201ENST00000263681 CCDC180Q9P1Z9 1646 aa14.61□□□□□ -0.07
POLD3-201ENST00000263681 TRIM41Q8WV44 630 aa14.52□□□□□ -0.09
POLD3-201ENST00000263681 SCAF1Q9H7N4 1312 aaKnown RBP14.5□□□□□ -0.09
POLD3-201ENST00000263681 PELP1Q8IZL8 1130 aaKnown RBP14.49□□□□□ -0.09
POLD3-201ENST00000263681 ZEB1P37275 1124 aaPredicted RBP14.47□□□□□ -0.09
POLD3-201ENST00000263681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.42□□□□□ -0.1
POLD3-201ENST00000263681 CCER1Q8TC90 406 aaPredicted RBP14.42□□□□□ -0.1
POLD3-201ENST00000263681 ZCCHC6Q5VYS8 1495 aaKnown RBP14.41□□□□□ -0.1
POLD3-201ENST00000263681 DCAF1Q9Y4B6 1507 aa14.39□□□□□ -0.11
POLD3-201ENST00000263681 YTHDC1Q96MU7 727 aaKnown RBP14.35□□□□□ -0.11
POLD3-201ENST00000263681 GTF3C3Q9Y5Q9 886 aa14.27□□□□□ -0.13
POLD3-201ENST00000263681 NEUROD1Q13562 356 aa14.25□□□□□ -0.13
POLD3-201ENST00000263681 CENPBP07199 599 aaPredicted RBP14.22□□□□□ -0.13
POLD3-201ENST00000263681 ACIN1Q9UKV3 1341 aaKnown RBP14.19□□□□□ -0.14
POLD3-201ENST00000263681 DIEXFQ68CQ4 756 aaKnown RBP14.18□□□□□ -0.14
POLD3-201ENST00000263681 RANGAP1P46060 587 aaPredicted RBP14.06□□□□□ -0.16
POLD3-201ENST00000263681 ABCC9O60706 1549 aa14.03□□□□□ -0.16
POLD3-201ENST00000263681 UBTFP17480 764 aaKnown RBP13.97□□□□□ -0.17
POLD3-201ENST00000263681 HNRNPUL2Q1KMD3 747 aaKnown RBP13.97□□□□□ -0.17
POLD3-201ENST00000263681 RSF1Q96T23 1441 aaPredicted RBP13.85□□□□□ -0.19
POLD3-201ENST00000263681 SCRIBQ14160 1630 aa13.84□□□□□ -0.19
POLD3-201ENST00000263681 ZNF316A6NFI3 1004 aaPredicted RBP13.82□□□□□ -0.2
POLD3-201ENST00000263681 MYT1Q01538 1121 aa13.81□□□□□ -0.2
POLD3-201ENST00000263681 MIER1Q8N108 512 aa13.81□□□□□ -0.2
POLD3-201ENST00000263681 RB1CC1Q8TDY2 1594 aa13.78□□□□□ -0.2
POLD3-201ENST00000263681 APLP2Q06481 763 aa13.76□□□□□ -0.21
POLD3-201ENST00000263681 NACADO15069 1562 aa13.7□□□□□ -0.22
POLD3-201ENST00000263681 BCANQ96GW7 911 aa13.68□□□□□ -0.22
POLD3-201ENST00000263681 ITGAEP38570 1179 aa13.65□□□□□ -0.22
POLD3-201ENST00000263681 CECR2Q9BXF3 1484 aa13.62□□□□□ -0.23
POLD3-201ENST00000263681 SLC24A1O60721 1099 aa13.58□□□□□ -0.23
POLD3-201ENST00000263681 CEP162Q5TB80 1403 aa13.55□□□□□ -0.24
POLD3-201ENST00000263681 CSRNP3Q8WYN3 585 aa13.55□□□□□ -0.24
POLD3-201ENST00000263681 SOGA1O94964 1423 aa13.48□□□□□ -0.25
POLD3-201ENST00000263681 MROH2BQ7Z745 1585 aa13.47□□□□□ -0.25
POLD3-201ENST00000263681 ABCC8Q09428 1581 aa13.47□□□□□ -0.25
POLD3-201ENST00000263681 CCDC88BA6NC98 1476 aa13.44□□□□□ -0.26
POLD3-201ENST00000263681 SUPT16HQ9Y5B9 1047 aaKnown RBP13.44□□□□□ -0.26
POLD3-201ENST00000263681 PABPN1Q86U42 306 aaKnown RBP eCLIP13.4□□□□□ -0.26
POLD3-201ENST00000263681 ATP1B4Q9UN42 357 aaPredicted RBP13.4□□□□□ -0.26
POLD3-201ENST00000263681 WIZO95785 1651 aa13.4□□□□□ -0.26
POLD3-201ENST00000263681 RUSC2Q8N2Y8 1516 aa13.37□□□□□ -0.27
POLD3-201ENST00000263681 FKBP8Q14318 412 aa13.37□□□□□ -0.27
POLD3-201ENST00000263681 HIRIP3Q9BW71 556 aaPredicted RBP13.36□□□□□ -0.27
POLD3-201ENST00000263681 KCNH8Q96L42 1107 aa13.36□□□□□ -0.27
POLD3-201ENST00000263681 NEFLP07196 543 aa13.36□□□□□ -0.27
POLD3-201ENST00000263681 TNIKQ9UKE5 1360 aa13.33□□□□□ -0.28
POLD3-201ENST00000263681 TSHZ2Q9NRE2 1034 aa13.31□□□□□ -0.28
POLD3-201ENST00000263681 TRIM52Q96A61 297 aa13.31□□□□□ -0.28
POLD3-201ENST00000263681 DDX10Q13206 875 aaKnown RBP13.3□□□□□ -0.28
POLD3-201ENST00000263681 ERICH6Q7L0X2 663 aa13.29□□□□□ -0.28
POLD3-201ENST00000263681 CLIP1P30622 1438 aa13.28□□□□□ -0.28
POLD3-201ENST00000263681 ANP32EQ9BTT0 268 aa13.28□□□□□ -0.28
POLD3-201ENST00000263681 CNGB1Q14028 1251 aaPredicted RBP13.24□□□□□ -0.29
POLD3-201ENST00000263681 UNC13AQ9UPW8 1703 aa13.24□□□□□ -0.29
POLD3-201ENST00000263681 WRNQ14191 1432 aaPredicted RBP eCLIP13.24□□□□□ -0.29
POLD3-201ENST00000263681 IRX6P78412 446 aaPredicted RBP13.23□□□□□ -0.29
POLD3-201ENST00000263681 BCL11AQ9H165 835 aa13.23□□□□□ -0.29
POLD3-201ENST00000263681 GOLGA3Q08378 1498 aa13.23□□□□□ -0.29
POLD3-201ENST00000263681 FAM50AQ14320 339 aaKnown RBP13.21□□□□□ -0.29
POLD3-201ENST00000263681 KANK4Q5T7N3 995 aaPredicted RBP13.18□□□□□ -0.3
POLD3-201ENST00000263681 SIN3AQ96ST3 1273 aa13.15□□□□□ -0.3
POLD3-201ENST00000263681 P3H3Q8IVL6 736 aa13.14□□□□□ -0.31
POLD3-201ENST00000263681 BICRAQ9NZM4 1560 aa13.12□□□□□ -0.31
POLD3-201ENST00000263681 ANP32CO43423 234 aa13.09□□□□□ -0.31
POLD3-201ENST00000263681 RBM19Q9Y4C8 960 aaKnown RBP13.09□□□□□ -0.31
POLD3-201ENST00000263681 CLSPNQ9HAW4 1339 aa13.09□□□□□ -0.31
POLD3-201ENST00000263681 DHX57Q6P158 1386 aaKnown RBP13.09□□□□□ -0.31
POLD3-201ENST00000263681 VPS8Q8N3P4 1428 aa13.08□□□□□ -0.32
POLD3-201ENST00000263681 BAZ1AQ9NRL2 1556 aaPredicted RBP13.08□□□□□ -0.32
POLD3-201ENST00000263681 EEA1Q15075 1411 aa13.08□□□□□ -0.32
POLD3-201ENST00000263681 CEP164Q9UPV0 1460 aa13.07□□□□□ -0.32
POLD3-201ENST00000263681 SENP3-EIF4A1A0A087X0R7 540 aa13.05□□□□□ -0.32
POLD3-201ENST00000263681 RAPGEF2Q9Y4G8 1499 aa13.05□□□□□ -0.32
POLD3-201ENST00000263681 HNRNPUQ00839 825 aaKnown RBP eCLIP13.04□□□□□ -0.32
POLD3-201ENST00000263681 POLR3GLQ9BT43 218 aa13.01□□□□□ -0.33
POLD3-201ENST00000263681 CDK11AQ9UQ88 783 aaPredicted RBP13□□□□□ -0.33
POLD3-201ENST00000263681 TOP2AP11388 1531 aaKnown RBP12.99□□□□□ -0.33
POLD3-201ENST00000263681 SMARCA2P51531 1590 aa12.97□□□□□ -0.33
POLD3-201ENST00000263681 NBR1Q14596 966 aa12.97□□□□□ -0.33
POLD3-201ENST00000263681 FAM9BQ8IZU0 186 aa12.93□□□□□ -0.34
POLD3-201ENST00000263681 CCNB3Q8WWL7 1395 aa12.93□□□□□ -0.34
POLD3-201ENST00000263681 RAB3GAP2Q9H2M9 1393 aa12.93□□□□□ -0.34
POLD3-201ENST00000263681 SMARCA4P51532 1647 aa12.88□□□□□ -0.35
POLD3-201ENST00000263681 KIF21BO75037 1637 aa12.88□□□□□ -0.35
POLD3-201ENST00000263681 B4GALNT3Q6L9W6 998 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms