RNA–Protein interactions for RNA: ENST00000261862.7

THSD4-201, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 5 BASIC

Gene THSD4, Length 3,133 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-201ENST00000261862 NISCHQ9Y2I1 1504 aa28.33■■■□□ 2.13
THSD4-201ENST00000261862 PELP1Q8IZL8 1130 aaKnown RBP24.68■■□□□ 1.54
THSD4-201ENST00000261862 SHROOM4Q9ULL8 1493 aa24.26■■□□□ 1.47
THSD4-201ENST00000261862 MYT1Q01538 1121 aa24.19■■□□□ 1.46
THSD4-201ENST00000261862 CCDC180Q9P1Z9 1646 aa24■■□□□ 1.43
THSD4-201ENST00000261862 ZCCHC6Q5VYS8 1495 aaKnown RBP23.96■■□□□ 1.43
THSD4-201ENST00000261862 SUPT5HO00267 1087 aaKnown RBP23.86■■□□□ 1.41
THSD4-201ENST00000261862 DCAF8L2P0C7V8 631 aa23.63■■□□□ 1.37
THSD4-201ENST00000261862 PRKCSHP14314 528 aaPredicted RBP23.44■■□□□ 1.34
THSD4-201ENST00000261862 TTBK1Q5TCY1 1321 aaPredicted RBP23.24■■□□□ 1.31
THSD4-201ENST00000261862 DCAF1Q9Y4B6 1507 aa23.22■■□□□ 1.31
THSD4-201ENST00000261862 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.3
THSD4-201ENST00000261862 MYO15BQ96JP2 1530 aa23.03■■□□□ 1.28
THSD4-201ENST00000261862 HRCP23327 699 aa22.89■■□□□ 1.26
THSD4-201ENST00000261862 SCAF1Q9H7N4 1312 aaKnown RBP22.83■■□□□ 1.24
THSD4-201ENST00000261862 BCL11AQ9H165 835 aa22.76■■□□□ 1.23
THSD4-201ENST00000261862 PPARGC1BQ86YN6 1023 aaKnown RBP22.6■■□□□ 1.21
THSD4-201ENST00000261862 ABCC9O60706 1549 aa22.59■■□□□ 1.21
THSD4-201ENST00000261862 APLP2Q06481 763 aa22.57■■□□□ 1.2
THSD4-201ENST00000261862 FAM9AQ8IZU1 332 aaPredicted RBP22.57■■□□□ 1.2
THSD4-201ENST00000261862 SCRIBQ14160 1630 aa22.55■■□□□ 1.2
THSD4-201ENST00000261862 PCGF6Q9BYE7 350 aa22.55■■□□□ 1.2
THSD4-201ENST00000261862 LOC105371045A0A1W2PR82 267 aa22.53■■□□□ 1.2
THSD4-201ENST00000261862 ERICH6Q7L0X2 663 aa22.51■■□□□ 1.19
THSD4-201ENST00000261862 SLC24A1O60721 1099 aa22.51■■□□□ 1.19
THSD4-201ENST00000261862 RSF1Q96T23 1441 aaPredicted RBP22.47■■□□□ 1.19
THSD4-201ENST00000261862 NACADO15069 1562 aa22.23■■□□□ 1.15
THSD4-201ENST00000261862 TRIM41Q8WV44 630 aa22.22■■□□□ 1.15
THSD4-201ENST00000261862 RB1CC1Q8TDY2 1594 aa22.2■■□□□ 1.14
THSD4-201ENST00000261862 CECR2Q9BXF3 1484 aa22.12■■□□□ 1.13
THSD4-201ENST00000261862 TRIM26Q12899 539 aaPredicted RBP22.11■■□□□ 1.13
THSD4-201ENST00000261862 MROH2BQ7Z745 1585 aa22.03■■□□□ 1.12
THSD4-201ENST00000261862 WIZO95785 1651 aa21.89■■□□□ 1.1
THSD4-201ENST00000261862 EHMT2Q96KQ7 1210 aa21.87■■□□□ 1.09
THSD4-201ENST00000261862 CENPBP07199 599 aaPredicted RBP21.79■■□□□ 1.08
THSD4-201ENST00000261862 BAZ1AQ9NRL2 1556 aaPredicted RBP21.76■■□□□ 1.07
THSD4-201ENST00000261862 ZEB1P37275 1124 aaPredicted RBP21.66■■□□□ 1.06
THSD4-201ENST00000261862 GTF3C3Q9Y5Q9 886 aa21.59■■□□□ 1.05
THSD4-201ENST00000261862 EIF4G1Q04637 1599 aaKnown RBP21.57■■□□□ 1.04
THSD4-201ENST00000261862 ACIN1Q9UKV3 1341 aaKnown RBP21.57■■□□□ 1.04
THSD4-201ENST00000261862 TOP2AP11388 1531 aaKnown RBP21.56■■□□□ 1.04
THSD4-201ENST00000261862 SMARCA4P51532 1647 aa21.54■■□□□ 1.04
THSD4-201ENST00000261862 NEUROD1Q13562 356 aa21.52■■□□□ 1.04
THSD4-201ENST00000261862 CCDC88BA6NC98 1476 aa21.5■■□□□ 1.03
THSD4-201ENST00000261862 DAXXQ9UER7 740 aaPredicted RBP21.47■■□□□ 1.03
THSD4-201ENST00000261862 UNC13AQ9UPW8 1703 aa21.44■■□□□ 1.02
THSD4-201ENST00000261862 ABCC8Q09428 1581 aa21.44■■□□□ 1.02
THSD4-201ENST00000261862 SMARCA2P51531 1590 aa21.44■■□□□ 1.02
THSD4-201ENST00000261862 EIF5BO60841 1220 aaKnown RBP21.41■■□□□ 1.02
THSD4-201ENST00000261862 ANP32EQ9BTT0 268 aa21.38■■□□□ 1.01
THSD4-201ENST00000261862 PABPN1Q86U42 306 aaKnown RBP eCLIP21.38■■□□□ 1.01
THSD4-201ENST00000261862 CSRNP3Q8WYN3 585 aa21.35■■□□□ 1.01
THSD4-201ENST00000261862 PLEKHG5O94827 1062 aa21.3■■□□□ 1
THSD4-201ENST00000261862 SOGA1O94964 1423 aa21.29■■□□□ 1
THSD4-201ENST00000261862 BICRAQ9NZM4 1560 aa21.23■□□□□ 0.99
THSD4-201ENST00000261862 ANO8Q9HCE9 1232 aaPredicted RBP21.23■□□□□ 0.99
THSD4-201ENST00000261862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.22■□□□□ 0.99
THSD4-201ENST00000261862 CEP162Q5TB80 1403 aa21.22■□□□□ 0.99
THSD4-201ENST00000261862 EEA1Q15075 1411 aa21.2■□□□□ 0.98
THSD4-201ENST00000261862 TNIKQ9UKE5 1360 aa21.2■□□□□ 0.98
THSD4-201ENST00000261862 CCER1Q8TC90 406 aaPredicted RBP21.19■□□□□ 0.98
THSD4-201ENST00000261862 WRNQ14191 1432 aaPredicted RBP eCLIP21.19■□□□□ 0.98
THSD4-201ENST00000261862 UBTFP17480 764 aaKnown RBP21.19■□□□□ 0.98
THSD4-201ENST00000261862 RUSC2Q8N2Y8 1516 aa21.17■□□□□ 0.98
THSD4-201ENST00000261862 PEG3Q9GZU2 1588 aa21.11■□□□□ 0.97
THSD4-201ENST00000261862 GOLGA3Q08378 1498 aa21.05■□□□□ 0.96
THSD4-201ENST00000261862 ATAD2BQ9ULI0 1458 aa21.02■□□□□ 0.96
THSD4-201ENST00000261862 BAZ1BQ9UIG0 1483 aaKnown RBP20.97■□□□□ 0.95
THSD4-201ENST00000261862 SYNJ1O43426 1573 aa20.95■□□□□ 0.94
THSD4-201ENST00000261862 UBE2Q2Q8WVN8 375 aa20.93■□□□□ 0.94
THSD4-201ENST00000261862 CEP164Q9UPV0 1460 aa20.93■□□□□ 0.94
THSD4-201ENST00000261862 KIF21BO75037 1637 aa20.85■□□□□ 0.93
THSD4-201ENST00000261862 CLIP1P30622 1438 aa20.83■□□□□ 0.93
THSD4-201ENST00000261862 DIEXFQ68CQ4 756 aaKnown RBP20.78■□□□□ 0.92
THSD4-201ENST00000261862 RAPGEF2Q9Y4G8 1499 aa20.76■□□□□ 0.91
THSD4-201ENST00000261862 RANGAP1P46060 587 aaPredicted RBP20.75■□□□□ 0.91
THSD4-201ENST00000261862 CCDC136Q96JN2 1154 aa20.75■□□□□ 0.91
THSD4-201ENST00000261862 PODXL2Q9NZ53 605 aa20.74■□□□□ 0.91
THSD4-201ENST00000261862 HNRNPUL2Q1KMD3 747 aaKnown RBP20.73■□□□□ 0.91
THSD4-201ENST00000261862 VPS8Q8N3P4 1428 aa20.73■□□□□ 0.91
THSD4-201ENST00000261862 TOP2BQ02880 1626 aa20.69■□□□□ 0.9
THSD4-201ENST00000261862 SALL2Q9Y467 1007 aaPredicted RBP20.69■□□□□ 0.9
THSD4-201ENST00000261862 ZNF316A6NFI3 1004 aaPredicted RBP20.62■□□□□ 0.89
THSD4-201ENST00000261862 NCAPD3P42695 1498 aa20.6■□□□□ 0.89
THSD4-201ENST00000261862 PKNOX2Q96KN3 472 aa20.6■□□□□ 0.89
THSD4-201ENST00000261862 BIVM-ERCC5R4GMW8 1640 aa20.59■□□□□ 0.89
THSD4-201ENST00000261862 HMGXB3Q12766 1538 aa20.56■□□□□ 0.88
THSD4-201ENST00000261862 PRXQ9BXM0 1461 aa20.54■□□□□ 0.88
THSD4-201ENST00000261862 ERICH3Q5RHP9 1530 aa20.52■□□□□ 0.88
THSD4-201ENST00000261862 CUX1P39880 1505 aa20.5■□□□□ 0.87
THSD4-201ENST00000261862 KIF27Q86VH2 1401 aa20.48■□□□□ 0.87
THSD4-201ENST00000261862 TSHZ2Q9NRE2 1034 aa20.48■□□□□ 0.87
THSD4-201ENST00000261862 CFTRP13569 1480 aa20.45■□□□□ 0.86
THSD4-201ENST00000261862 ARAP1Q96P48 1450 aa20.44■□□□□ 0.86
THSD4-201ENST00000261862 KANK4Q5T7N3 995 aaPredicted RBP20.4■□□□□ 0.86
THSD4-201ENST00000261862 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.33■□□□□ 0.85
THSD4-201ENST00000261862 MIER1Q8N108 512 aa20.32■□□□□ 0.84
THSD4-201ENST00000261862 YTHDC1Q96MU7 727 aaKnown RBP20.31■□□□□ 0.84
THSD4-201ENST00000261862 CLSPNQ9HAW4 1339 aa20.29■□□□□ 0.84
THSD4-201ENST00000261862 ARHGAP35Q9NRY4 1499 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms