RNA–Protein interactions for RNA: ENST00000258742.9

NUPL2-201, Transcript of nucleoporin like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUPL2, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUPL2-201ENST00000258742 NISCHQ9Y2I1 1504 aa28.23■■■□□ 2.11
NUPL2-201ENST00000258742 CCDC180Q9P1Z9 1646 aa24.56■■□□□ 1.52
NUPL2-201ENST00000258742 ZCCHC6Q5VYS8 1495 aaKnown RBP23.77■■□□□ 1.4
NUPL2-201ENST00000258742 ABCC9O60706 1549 aa23.61■■□□□ 1.37
NUPL2-201ENST00000258742 DCAF8L2P0C7V8 631 aa23.44■■□□□ 1.34
NUPL2-201ENST00000258742 SHROOM4Q9ULL8 1493 aa23.39■■□□□ 1.33
NUPL2-201ENST00000258742 DCAF1Q9Y4B6 1507 aa23.31■■□□□ 1.32
NUPL2-201ENST00000258742 MYO15BQ96JP2 1530 aa23.01■■□□□ 1.27
NUPL2-201ENST00000258742 NACADO15069 1562 aa22.96■■□□□ 1.27
NUPL2-201ENST00000258742 RB1CC1Q8TDY2 1594 aa22.84■■□□□ 1.25
NUPL2-201ENST00000258742 SUPT5HO00267 1087 aaKnown RBP22.7■■□□□ 1.22
NUPL2-201ENST00000258742 SCRIBQ14160 1630 aa22.61■■□□□ 1.21
NUPL2-201ENST00000258742 UNC13AQ9UPW8 1703 aa22.45■■□□□ 1.18
NUPL2-201ENST00000258742 BICRAQ9NZM4 1560 aa22.25■■□□□ 1.15
NUPL2-201ENST00000258742 PABPN1Q86U42 306 aaKnown RBP eCLIP22.25■■□□□ 1.15
NUPL2-201ENST00000258742 RSF1Q96T23 1441 aaPredicted RBP22.04■■□□□ 1.12
NUPL2-201ENST00000258742 CECR2Q9BXF3 1484 aa21.91■■□□□ 1.1
NUPL2-201ENST00000258742 MROH2BQ7Z745 1585 aa21.82■■□□□ 1.08
NUPL2-201ENST00000258742 BAZ1AQ9NRL2 1556 aaPredicted RBP21.81■■□□□ 1.08
NUPL2-201ENST00000258742 CHIC1Q5VXU3 224 aa21.79■■□□□ 1.08
NUPL2-201ENST00000258742 WIZO95785 1651 aa21.64■■□□□ 1.05
NUPL2-201ENST00000258742 SMARCA4P51532 1647 aa21.64■■□□□ 1.05
NUPL2-201ENST00000258742 EIF4G1Q04637 1599 aaKnown RBP21.57■■□□□ 1.04
NUPL2-201ENST00000258742 TOP2AP11388 1531 aaKnown RBP21.46■■□□□ 1.03
NUPL2-201ENST00000258742 ATAD2BQ9ULI0 1458 aa21.37■■□□□ 1.01
NUPL2-201ENST00000258742 PEG3Q9GZU2 1588 aa21.37■■□□□ 1.01
NUPL2-201ENST00000258742 CC2D2AQ9P2K1 1620 aa21.34■■□□□ 1.01
NUPL2-201ENST00000258742 TRIM41Q8WV44 630 aa21.31■■□□□ 1
NUPL2-201ENST00000258742 SMARCA2P51531 1590 aa21.29■■□□□ 1
NUPL2-201ENST00000258742 CCDC88BA6NC98 1476 aa21.25■□□□□ 0.99
NUPL2-201ENST00000258742 NCAPD3P42695 1498 aa21.23■□□□□ 0.99
NUPL2-201ENST00000258742 DNAJC5BQ9UF47 199 aa21.23■□□□□ 0.99
NUPL2-201ENST00000258742 BAZ1BQ9UIG0 1483 aaKnown RBP21.2■□□□□ 0.98
NUPL2-201ENST00000258742 HMGXB3Q12766 1538 aa21.14■□□□□ 0.97
NUPL2-201ENST00000258742 LOC105371045A0A1W2PR82 267 aa20.99■□□□□ 0.95
NUPL2-201ENST00000258742 FAM9AQ8IZU1 332 aaPredicted RBP20.95■□□□□ 0.94
NUPL2-201ENST00000258742 ABCC8Q09428 1581 aa20.9■□□□□ 0.94
NUPL2-201ENST00000258742 WRNQ14191 1432 aaPredicted RBP eCLIP20.79■□□□□ 0.92
NUPL2-201ENST00000258742 EHMT2Q96KQ7 1210 aa20.68■□□□□ 0.9
NUPL2-201ENST00000258742 CFTRP13569 1480 aa20.68■□□□□ 0.9
NUPL2-201ENST00000258742 EEA1Q15075 1411 aa20.68■□□□□ 0.9
NUPL2-201ENST00000258742 CADPSQ9ULU8 1353 aa20.67■□□□□ 0.9
NUPL2-201ENST00000258742 NESP48681 1621 aa20.67■□□□□ 0.9
NUPL2-201ENST00000258742 SYNJ1O43426 1573 aa20.61■□□□□ 0.89
NUPL2-201ENST00000258742 SOGA1O94964 1423 aa20.6■□□□□ 0.89
NUPL2-201ENST00000258742 PRDM2Q13029 1718 aa20.58■□□□□ 0.89
NUPL2-201ENST00000258742 CSRNP3Q8WYN3 585 aa20.54■□□□□ 0.88
NUPL2-201ENST00000258742 LAMC3Q9Y6N6 1575 aa20.53■□□□□ 0.88
NUPL2-201ENST00000258742 TOP2BQ02880 1626 aa20.51■□□□□ 0.87
NUPL2-201ENST00000258742 RUSC2Q8N2Y8 1516 aa20.45■□□□□ 0.87
NUPL2-201ENST00000258742 BIVM-ERCC5R4GMW8 1640 aa20.45■□□□□ 0.86
NUPL2-201ENST00000258742 FANCD2Q9BXW9 1451 aa20.44■□□□□ 0.86
NUPL2-201ENST00000258742 PCGF6Q9BYE7 350 aa20.44■□□□□ 0.86
NUPL2-201ENST00000258742 GOLGA3Q08378 1498 aa20.4■□□□□ 0.86
NUPL2-201ENST00000258742 UBTFP17480 764 aaKnown RBP20.4■□□□□ 0.86
NUPL2-201ENST00000258742 CUX1P39880 1505 aa20.38■□□□□ 0.85
NUPL2-201ENST00000258742 TNIKQ9UKE5 1360 aa20.38■□□□□ 0.85
NUPL2-201ENST00000258742 PDS5BQ9NTI5 1447 aa20.37■□□□□ 0.85
NUPL2-201ENST00000258742 CEP164Q9UPV0 1460 aa20.37■□□□□ 0.85
NUPL2-201ENST00000258742 KIF21AQ7Z4S6 1674 aa20.36■□□□□ 0.85
NUPL2-201ENST00000258742 TRIM26Q12899 539 aaPredicted RBP20.34■□□□□ 0.85
NUPL2-201ENST00000258742 CEP162Q5TB80 1403 aa20.31■□□□□ 0.84
NUPL2-201ENST00000258742 KIF21BO75037 1637 aa20.31■□□□□ 0.84
NUPL2-201ENST00000258742 KIF27Q86VH2 1401 aa20.26■□□□□ 0.83
NUPL2-201ENST00000258742 URB2Q14146 1524 aaKnown RBP20.23■□□□□ 0.83
NUPL2-201ENST00000258742 ERCC6Q03468 1493 aa20.22■□□□□ 0.83
NUPL2-201ENST00000258742 TOPBP1Q92547 1522 aa20.18■□□□□ 0.82
NUPL2-201ENST00000258742 RAPGEF2Q9Y4G8 1499 aa20.17■□□□□ 0.82
NUPL2-201ENST00000258742 DNMBPQ6XZF7 1577 aa20.17■□□□□ 0.82
NUPL2-201ENST00000258742 FGD5Q6ZNL6 1462 aa20.15■□□□□ 0.82
NUPL2-201ENST00000258742 MRC2Q9UBG0 1479 aa20.15■□□□□ 0.82
NUPL2-201ENST00000258742 ERICH3Q5RHP9 1530 aa20.14■□□□□ 0.81
NUPL2-201ENST00000258742 CUX2O14529 1486 aa20.12■□□□□ 0.81
NUPL2-201ENST00000258742 PRXQ9BXM0 1461 aa20.12■□□□□ 0.81
NUPL2-201ENST00000258742 CLIP1P30622 1438 aa20.1■□□□□ 0.81
NUPL2-201ENST00000258742 THOC2Q8NI27 1593 aaKnown RBP20.1■□□□□ 0.81
NUPL2-201ENST00000258742 POLA1P09884 1462 aaPredicted RBP20.07■□□□□ 0.8
NUPL2-201ENST00000258742 WDR62O43379 1518 aa20.07■□□□□ 0.8
NUPL2-201ENST00000258742 HRCP23327 699 aa20.06■□□□□ 0.8
NUPL2-201ENST00000258742 RAD54L2Q9Y4B4 1467 aa20.04■□□□□ 0.8
NUPL2-201ENST00000258742 PPARGC1BQ86YN6 1023 aaKnown RBP20.04■□□□□ 0.8
NUPL2-201ENST00000258742 RANGAP1P46060 587 aaPredicted RBP20■□□□□ 0.79
NUPL2-201ENST00000258742 IGF1RP08069 1367 aa19.99■□□□□ 0.79
NUPL2-201ENST00000258742 ABCA10Q8WWZ4 1543 aa19.97■□□□□ 0.79
NUPL2-201ENST00000258742 VPS8Q8N3P4 1428 aa19.94■□□□□ 0.78
NUPL2-201ENST00000258742 CARMIL1Q5VZK9 1371 aa19.94■□□□□ 0.78
NUPL2-201ENST00000258742 APLP2Q06481 763 aa19.94■□□□□ 0.78
NUPL2-201ENST00000258742 TARBP1Q13395 1621 aaKnown RBP19.93■□□□□ 0.78
NUPL2-201ENST00000258742 TTBK1Q5TCY1 1321 aaPredicted RBP19.89■□□□□ 0.77
NUPL2-201ENST00000258742 WDR97A6NE52 1622 aa19.88■□□□□ 0.77
NUPL2-201ENST00000258742 TDRD9Q8NDG6 1382 aaKnown RBP19.88■□□□□ 0.77
NUPL2-201ENST00000258742 IFT140Q96RY7 1462 aa19.84■□□□□ 0.77
NUPL2-201ENST00000258742 ZNF608Q9ULD9 1512 aaPredicted RBP19.84■□□□□ 0.77
NUPL2-201ENST00000258742 AQRO60306 1485 aaKnown RBP eCLIP19.81■□□□□ 0.768e-6■■■■□ 23.2
NUPL2-201ENST00000258742 CUL7Q14999 1698 aa19.8■□□□□ 0.76
NUPL2-201ENST00000258742 ARAP1Q96P48 1450 aa19.79■□□□□ 0.76
NUPL2-201ENST00000258742 ABCA5Q8WWZ7 1642 aa19.79■□□□□ 0.76
NUPL2-201ENST00000258742 GAPVD1Q14C86 1478 aa19.76■□□□□ 0.75
NUPL2-201ENST00000258742 ZEB1P37275 1124 aaPredicted RBP19.76■□□□□ 0.75
NUPL2-201ENST00000258742 ARHGAP35Q9NRY4 1499 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms