RNA–Protein interactions for RNA: ENST00000252483.9

NECTIN2-201, Transcript of nectin cell adhesion molecule 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN2, Length 2,466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN2-201ENST00000252483 NISCHQ9Y2I1 1504 aa29.41■■■□□ 2.3
NECTIN2-201ENST00000252483 CCDC180Q9P1Z9 1646 aa25.46■■□□□ 1.67
NECTIN2-201ENST00000252483 ZCCHC6Q5VYS8 1495 aaKnown RBP24.77■■□□□ 1.56
NECTIN2-201ENST00000252483 SHROOM4Q9ULL8 1493 aa24.34■■□□□ 1.49
NECTIN2-201ENST00000252483 DCAF8L2P0C7V8 631 aa24.28■■□□□ 1.48
NECTIN2-201ENST00000252483 DCAF1Q9Y4B6 1507 aa24.24■■□□□ 1.47
NECTIN2-201ENST00000252483 ABCC9O60706 1549 aa23.93■■□□□ 1.42
NECTIN2-201ENST00000252483 MYO15BQ96JP2 1530 aa23.81■■□□□ 1.4
NECTIN2-201ENST00000252483 NACADO15069 1562 aa23.62■■□□□ 1.37
NECTIN2-201ENST00000252483 SCRIBQ14160 1630 aa23.57■■□□□ 1.36
NECTIN2-201ENST00000252483 SUPT5HO00267 1087 aaKnown RBP23.52■■□□□ 1.36
NECTIN2-201ENST00000252483 RB1CC1Q8TDY2 1594 aa23.37■■□□□ 1.33
NECTIN2-201ENST00000252483 UNC13AQ9UPW8 1703 aa23.07■■□□□ 1.28
NECTIN2-201ENST00000252483 RSF1Q96T23 1441 aaPredicted RBP22.96■■□□□ 1.27
NECTIN2-201ENST00000252483 CECR2Q9BXF3 1484 aa22.92■■□□□ 1.26
NECTIN2-201ENST00000252483 MROH2BQ7Z745 1585 aa22.79■■□□□ 1.24
NECTIN2-201ENST00000252483 BICRAQ9NZM4 1560 aa22.77■■□□□ 1.23
NECTIN2-201ENST00000252483 BAZ1AQ9NRL2 1556 aaPredicted RBP22.66■■□□□ 1.22
NECTIN2-201ENST00000252483 PABPN1Q86U42 306 aaKnown RBP eCLIP22.66■■□□□ 1.22
NECTIN2-201ENST00000252483 WIZO95785 1651 aa22.65■■□□□ 1.22
NECTIN2-201ENST00000252483 CHIC1Q5VXU3 224 aa22.64■■□□□ 1.21
NECTIN2-201ENST00000252483 SMARCA4P51532 1647 aa22.57■■□□□ 1.2
NECTIN2-201ENST00000252483 TOP2AP11388 1531 aaKnown RBP22.32■■□□□ 1.16
NECTIN2-201ENST00000252483 PEG3Q9GZU2 1588 aa22.23■■□□□ 1.15
NECTIN2-201ENST00000252483 SMARCA2P51531 1590 aa22.17■■□□□ 1.14
NECTIN2-201ENST00000252483 CCDC88BA6NC98 1476 aa22.15■■□□□ 1.14
NECTIN2-201ENST00000252483 EIF4G1Q04637 1599 aaKnown RBP22.13■■□□□ 1.13
NECTIN2-201ENST00000252483 ATAD2BQ9ULI0 1458 aa22.11■■□□□ 1.13
NECTIN2-201ENST00000252483 TRIM41Q8WV44 630 aa22.02■■□□□ 1.12
NECTIN2-201ENST00000252483 BAZ1BQ9UIG0 1483 aaKnown RBP21.99■■□□□ 1.11
NECTIN2-201ENST00000252483 LOC105371045A0A1W2PR82 267 aa21.86■■□□□ 1.09
NECTIN2-201ENST00000252483 ABCC8Q09428 1581 aa21.85■■□□□ 1.09
NECTIN2-201ENST00000252483 NCAPD3P42695 1498 aa21.83■■□□□ 1.08
NECTIN2-201ENST00000252483 HMGXB3Q12766 1538 aa21.82■■□□□ 1.08
NECTIN2-201ENST00000252483 FAM9AQ8IZU1 332 aaPredicted RBP21.73■■□□□ 1.07
NECTIN2-201ENST00000252483 CC2D2AQ9P2K1 1620 aa21.64■■□□□ 1.06
NECTIN2-201ENST00000252483 WRNQ14191 1432 aaPredicted RBP eCLIP21.58■■□□□ 1.04
NECTIN2-201ENST00000252483 SYNJ1O43426 1573 aa21.54■■□□□ 1.04
NECTIN2-201ENST00000252483 EHMT2Q96KQ7 1210 aa21.48■■□□□ 1.03
NECTIN2-201ENST00000252483 SOGA1O94964 1423 aa21.47■■□□□ 1.03
NECTIN2-201ENST00000252483 CFTRP13569 1480 aa21.45■■□□□ 1.02
NECTIN2-201ENST00000252483 RUSC2Q8N2Y8 1516 aa21.41■■□□□ 1.02
NECTIN2-201ENST00000252483 PRDM2Q13029 1718 aa21.38■■□□□ 1.01
NECTIN2-201ENST00000252483 TOP2BQ02880 1626 aa21.37■■□□□ 1.01
NECTIN2-201ENST00000252483 BIVM-ERCC5R4GMW8 1640 aa21.34■■□□□ 1.01
NECTIN2-201ENST00000252483 EEA1Q15075 1411 aa21.33■■□□□ 1.01
NECTIN2-201ENST00000252483 CADPSQ9ULU8 1353 aa21.3■■□□□ 1
NECTIN2-201ENST00000252483 CUX1P39880 1505 aa21.28■■□□□ 1
NECTIN2-201ENST00000252483 CSRNP3Q8WYN3 585 aa21.27■□□□□ 0.99
NECTIN2-201ENST00000252483 DNAJC5BQ9UF47 199 aa21.15■□□□□ 0.98
NECTIN2-201ENST00000252483 NESP48681 1621 aa21.14■□□□□ 0.97
NECTIN2-201ENST00000252483 PCGF6Q9BYE7 350 aa21.13■□□□□ 0.97
NECTIN2-201ENST00000252483 GOLGA3Q08378 1498 aa21.12■□□□□ 0.97
NECTIN2-201ENST00000252483 KIF21BO75037 1637 aa21.12■□□□□ 0.97
NECTIN2-201ENST00000252483 TNIKQ9UKE5 1360 aa21.1■□□□□ 0.97
NECTIN2-201ENST00000252483 FANCD2Q9BXW9 1451 aa21.1■□□□□ 0.97
NECTIN2-201ENST00000252483 CEP164Q9UPV0 1460 aa21.08■□□□□ 0.97
NECTIN2-201ENST00000252483 CEP162Q5TB80 1403 aa21.06■□□□□ 0.96
NECTIN2-201ENST00000252483 UBTFP17480 764 aaKnown RBP21.05■□□□□ 0.96
NECTIN2-201ENST00000252483 LAMC3Q9Y6N6 1575 aa21.03■□□□□ 0.96
NECTIN2-201ENST00000252483 RAPGEF2Q9Y4G8 1499 aa21.01■□□□□ 0.95
NECTIN2-201ENST00000252483 FGD5Q6ZNL6 1462 aa20.99■□□□□ 0.95
NECTIN2-201ENST00000252483 KIF27Q86VH2 1401 aa20.97■□□□□ 0.95
NECTIN2-201ENST00000252483 TRIM26Q12899 539 aaPredicted RBP20.97■□□□□ 0.95
NECTIN2-201ENST00000252483 DNMBPQ6XZF7 1577 aa20.94■□□□□ 0.94
NECTIN2-201ENST00000252483 PRXQ9BXM0 1461 aa20.94■□□□□ 0.94
NECTIN2-201ENST00000252483 HRCP23327 699 aa20.92■□□□□ 0.94
NECTIN2-201ENST00000252483 TOPBP1Q92547 1522 aa20.91■□□□□ 0.94
NECTIN2-201ENST00000252483 CUX2O14529 1486 aa20.9■□□□□ 0.94
NECTIN2-201ENST00000252483 ERICH3Q5RHP9 1530 aa20.9■□□□□ 0.94
NECTIN2-201ENST00000252483 KIF21AQ7Z4S6 1674 aa20.87■□□□□ 0.93
NECTIN2-201ENST00000252483 URB2Q14146 1524 aaKnown RBP20.85■□□□□ 0.93
NECTIN2-201ENST00000252483 PPARGC1BQ86YN6 1023 aaKnown RBP20.85■□□□□ 0.93
NECTIN2-201ENST00000252483 PDS5BQ9NTI5 1447 aa20.85■□□□□ 0.93
NECTIN2-201ENST00000252483 POLA1P09884 1462 aaPredicted RBP20.84■□□□□ 0.93
NECTIN2-201ENST00000252483 RAD54L2Q9Y4B4 1467 aa20.82■□□□□ 0.92
NECTIN2-201ENST00000252483 CLIP1P30622 1438 aa20.82■□□□□ 0.92
NECTIN2-201ENST00000252483 IGF1RP08069 1367 aa20.8■□□□□ 0.92
NECTIN2-201ENST00000252483 ABCA10Q8WWZ4 1543 aa20.76■□□□□ 0.91
NECTIN2-201ENST00000252483 RANGAP1P46060 587 aaPredicted RBP20.72■□□□□ 0.91
NECTIN2-201ENST00000252483 WDR97A6NE52 1622 aa20.72■□□□□ 0.91
NECTIN2-201ENST00000252483 CARMIL1Q5VZK9 1371 aa20.68■□□□□ 0.9
NECTIN2-201ENST00000252483 VPS8Q8N3P4 1428 aa20.66■□□□□ 0.9
NECTIN2-201ENST00000252483 TTBK1Q5TCY1 1321 aaPredicted RBP20.62■□□□□ 0.89
NECTIN2-201ENST00000252483 ARAP1Q96P48 1450 aa20.61■□□□□ 0.89
NECTIN2-201ENST00000252483 ABCA5Q8WWZ7 1642 aa20.61■□□□□ 0.89
NECTIN2-201ENST00000252483 TARBP1Q13395 1621 aaKnown RBP20.59■□□□□ 0.89
NECTIN2-201ENST00000252483 MRC2Q9UBG0 1479 aa20.59■□□□□ 0.89
NECTIN2-201ENST00000252483 TDRD9Q8NDG6 1382 aaKnown RBP20.58■□□□□ 0.88
NECTIN2-201ENST00000252483 CUL7Q14999 1698 aa20.58■□□□□ 0.88
NECTIN2-201ENST00000252483 ARHGAP35Q9NRY4 1499 aa20.55■□□□□ 0.88
NECTIN2-201ENST00000252483 GAPVD1Q14C86 1478 aa20.53■□□□□ 0.88
NECTIN2-201ENST00000252483 WDR62O43379 1518 aa20.49■□□□□ 0.87
NECTIN2-201ENST00000252483 CTTNBP2Q8WZ74 1663 aa20.44■□□□□ 0.86
NECTIN2-201ENST00000252483 PBRM1Q86U86 1689 aa20.43■□□□□ 0.86
NECTIN2-201ENST00000252483 ERCC6Q03468 1493 aa20.43■□□□□ 0.86
NECTIN2-201ENST00000252483 APLP2Q06481 763 aa20.41■□□□□ 0.86
NECTIN2-201ENST00000252483 AQRO60306 1485 aaKnown RBP eCLIP20.4■□□□□ 0.862e-7■■■■■ 45.3
NECTIN2-201ENST00000252483 THOC2Q8NI27 1593 aaKnown RBP20.4■□□□□ 0.86
NECTIN2-201ENST00000252483 IFT140Q96RY7 1462 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms