RNA–Protein interactions for RNA: ENST00000244520.9

SNRPC-201, Transcript of small nuclear ribonucleoprotein polypeptide C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPC, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPC-201ENST00000244520 NISCHQ9Y2I1 1504 aa33.41■■■□□ 2.94
SNRPC-201ENST00000244520 CCDC180Q9P1Z9 1646 aa29.69■■■□□ 2.34
SNRPC-201ENST00000244520 ABCC9O60706 1549 aa29.51■■■□□ 2.32
SNRPC-201ENST00000244520 DCAF8L2P0C7V8 631 aa28.29■■■□□ 2.12
SNRPC-201ENST00000244520 RB1CC1Q8TDY2 1594 aa28.11■■■□□ 2.09
SNRPC-201ENST00000244520 NACADO15069 1562 aa27.98■■■□□ 2.07
SNRPC-201ENST00000244520 ZCCHC6Q5VYS8 1495 aaKnown RBP27.77■■■□□ 2.04
SNRPC-201ENST00000244520 PABPN1Q86U42 306 aaKnown RBP eCLIP27.62■■■□□ 2.01
SNRPC-201ENST00000244520 MYO15BQ96JP2 1530 aa27.62■■■□□ 2.01
SNRPC-201ENST00000244520 UNC13AQ9UPW8 1703 aa27.55■■■□□ 2
SNRPC-201ENST00000244520 DCAF1Q9Y4B6 1507 aa27.47■■□□□ 1.99
SNRPC-201ENST00000244520 BICRAQ9NZM4 1560 aa27.32■■□□□ 1.96
SNRPC-201ENST00000244520 SCRIBQ14160 1630 aa27.32■■□□□ 1.96
SNRPC-201ENST00000244520 DNAJC5BQ9UF47 199 aa27.31■■□□□ 1.96
SNRPC-201ENST00000244520 SHROOM4Q9ULL8 1493 aa26.77■■□□□ 1.88
SNRPC-201ENST00000244520 EIF4G1Q04637 1599 aaKnown RBP26.62■■□□□ 1.85
SNRPC-201ENST00000244520 CC2D2AQ9P2K1 1620 aa26.59■■□□□ 1.85
SNRPC-201ENST00000244520 CECR2Q9BXF3 1484 aa26.46■■□□□ 1.83
SNRPC-201ENST00000244520 SMARCA4P51532 1647 aa25.99■■□□□ 1.75
SNRPC-201ENST00000244520 ATAD2BQ9ULI0 1458 aa25.9■■□□□ 1.74
SNRPC-201ENST00000244520 BAZ1AQ9NRL2 1556 aaPredicted RBP25.87■■□□□ 1.73
SNRPC-201ENST00000244520 MROH2BQ7Z745 1585 aa25.83■■□□□ 1.73
SNRPC-201ENST00000244520 NCAPD3P42695 1498 aa25.83■■□□□ 1.73
SNRPC-201ENST00000244520 SMARCA2P51531 1590 aa25.78■■□□□ 1.72
SNRPC-201ENST00000244520 BAZ1BQ9UIG0 1483 aaKnown RBP25.69■■□□□ 1.7
SNRPC-201ENST00000244520 HMGXB3Q12766 1538 aa25.68■■□□□ 1.7
SNRPC-201ENST00000244520 PEG3Q9GZU2 1588 aa25.61■■□□□ 1.69
SNRPC-201ENST00000244520 WIZO95785 1651 aa25.58■■□□□ 1.68
SNRPC-201ENST00000244520 NESP48681 1621 aa25.49■■□□□ 1.67
SNRPC-201ENST00000244520 RSF1Q96T23 1441 aaPredicted RBP25.43■■□□□ 1.66
SNRPC-201ENST00000244520 ERCC6Q03468 1493 aa25.4■■□□□ 1.66
SNRPC-201ENST00000244520 LAMC3Q9Y6N6 1575 aa25.18■■□□□ 1.62
SNRPC-201ENST00000244520 TOP2AP11388 1531 aaKnown RBP25.18■■□□□ 1.62
SNRPC-201ENST00000244520 CADPSQ9ULU8 1353 aa25.13■■□□□ 1.61
SNRPC-201ENST00000244520 KIF21AQ7Z4S6 1674 aa25.12■■□□□ 1.61
SNRPC-201ENST00000244520 PDS5BQ9NTI5 1447 aa25.05■■□□□ 1.6
SNRPC-201ENST00000244520 CUX2O14529 1486 aa25.05■■□□□ 1.6
SNRPC-201ENST00000244520 THOC2Q8NI27 1593 aaKnown RBP25.01■■□□□ 1.59
SNRPC-201ENST00000244520 CCDC88BA6NC98 1476 aa24.96■■□□□ 1.59
SNRPC-201ENST00000244520 CFTRP13569 1480 aa24.9■■□□□ 1.58
SNRPC-201ENST00000244520 FANCD2Q9BXW9 1451 aa24.89■■□□□ 1.57
SNRPC-201ENST00000244520 MRC2Q9UBG0 1479 aa24.85■■□□□ 1.57
SNRPC-201ENST00000244520 CEP164Q9UPV0 1460 aa24.85■■□□□ 1.57
SNRPC-201ENST00000244520 SUPT5HO00267 1087 aaKnown RBP24.85■■□□□ 1.57
SNRPC-201ENST00000244520 WDR62O43379 1518 aa24.74■■□□□ 1.55
SNRPC-201ENST00000244520 PRDM2Q13029 1718 aa24.68■■□□□ 1.54
SNRPC-201ENST00000244520 URB2Q14146 1524 aaKnown RBP24.67■■□□□ 1.54
SNRPC-201ENST00000244520 DNAJC5Q9H3Z4 198 aa24.61■■□□□ 1.53
SNRPC-201ENST00000244520 TOPBP1Q92547 1522 aa24.45■■□□□ 1.51
SNRPC-201ENST00000244520 DNMBPQ6XZF7 1577 aa24.37■■□□□ 1.49
SNRPC-201ENST00000244520 ZNF608Q9ULD9 1512 aaPredicted RBP24.35■■□□□ 1.49
SNRPC-201ENST00000244520 IFT140Q96RY7 1462 aa24.3■■□□□ 1.48
SNRPC-201ENST00000244520 ABCC8Q09428 1581 aa24.29■■□□□ 1.48
SNRPC-201ENST00000244520 POLA1P09884 1462 aaPredicted RBP24.24■■□□□ 1.47
SNRPC-201ENST00000244520 RAD54L2Q9Y4B4 1467 aa24.24■■□□□ 1.47
SNRPC-201ENST00000244520 CUX1P39880 1505 aa24.24■■□□□ 1.47
SNRPC-201ENST00000244520 AQRO60306 1485 aaKnown RBP eCLIP24.19■■□□□ 1.465e-8■■■■■ 32.2
SNRPC-201ENST00000244520 FGD5Q6ZNL6 1462 aa24.19■■□□□ 1.46
SNRPC-201ENST00000244520 TARBP1Q13395 1621 aaKnown RBP24.18■■□□□ 1.46
SNRPC-201ENST00000244520 EIF4G3O43432 1585 aaKnown RBP24.18■■□□□ 1.46
SNRPC-201ENST00000244520 SOGA1O94964 1423 aa24.16■■□□□ 1.46
SNRPC-201ENST00000244520 TDRD9Q8NDG6 1382 aaKnown RBP24.12■■□□□ 1.45
SNRPC-201ENST00000244520 OSCARQ8IYS5 282 aa24.07■■□□□ 1.44
SNRPC-201ENST00000244520 FBLN2P98095 1184 aa24.02■■□□□ 1.44
SNRPC-201ENST00000244520 SYNJ1O43426 1573 aa23.98■■□□□ 1.43
SNRPC-201ENST00000244520 WRNQ14191 1432 aaPredicted RBP eCLIP23.97■■□□□ 1.43
SNRPC-201ENST00000244520 CHD1O14646 1710 aa23.94■■□□□ 1.42
SNRPC-201ENST00000244520 TRIM41Q8WV44 630 aa23.94■■□□□ 1.42
SNRPC-201ENST00000244520 SNAPC4Q5SXM2 1469 aa23.93■■□□□ 1.42
SNRPC-201ENST00000244520 WDR97A6NE52 1622 aa23.92■■□□□ 1.42
SNRPC-201ENST00000244520 TOP2BQ02880 1626 aa23.9■■□□□ 1.42
SNRPC-201ENST00000244520 BIVM-ERCC5R4GMW8 1640 aa23.89■■□□□ 1.42
SNRPC-201ENST00000244520 ABCA10Q8WWZ4 1543 aa23.85■■□□□ 1.41
SNRPC-201ENST00000244520 GAPVD1Q14C86 1478 aa23.85■■□□□ 1.41
SNRPC-201ENST00000244520 GRIN2BQ13224 1484 aa23.84■■□□□ 1.41
SNRPC-201ENST00000244520 PBRM1Q86U86 1689 aa23.83■■□□□ 1.4
SNRPC-201ENST00000244520 CHMP7Q8WUX9 453 aaPredicted RBP23.81■■□□□ 1.4
SNRPC-201ENST00000244520 ABCA5Q8WWZ7 1642 aa23.8■■□□□ 1.4
SNRPC-201ENST00000244520 MAGI1Q96QZ7 1491 aaPredicted RBP23.75■■□□□ 1.39
SNRPC-201ENST00000244520 RIMBP3CA6NJZ7 1639 aa23.75■■□□□ 1.39
SNRPC-201ENST00000244520 RIMBP3BA6NNM3 1639 aa23.75■■□□□ 1.39
SNRPC-201ENST00000244520 RIMBP3Q9UFD9 1639 aa23.75■■□□□ 1.39
SNRPC-201ENST00000244520 SYNJ2O15056 1496 aa23.7■■□□□ 1.38
SNRPC-201ENST00000244520 ARHGEF11O15085 1522 aa23.69■■□□□ 1.38
SNRPC-201ENST00000244520 ADAMTS12P58397 1594 aa23.61■■□□□ 1.37
SNRPC-201ENST00000244520 CYB5RLQ6IPT4 315 aa23.6■■□□□ 1.37
SNRPC-201ENST00000244520 CLASP1Q7Z460 1538 aa23.59■■□□□ 1.37
SNRPC-201ENST00000244520 GRIN2AQ12879 1464 aa23.56■■□□□ 1.36
SNRPC-201ENST00000244520 ERICH3Q5RHP9 1530 aa23.54■■□□□ 1.36
SNRPC-201ENST00000244520 FHAD1B1AJZ9 1412 aa23.53■■□□□ 1.36
SNRPC-201ENST00000244520 ARAP1Q96P48 1450 aa23.52■■□□□ 1.36
SNRPC-201ENST00000244520 CEP170Q5SW79 1584 aa23.49■■□□□ 1.35
SNRPC-201ENST00000244520 KIF27Q86VH2 1401 aa23.46■■□□□ 1.35
SNRPC-201ENST00000244520 IGF1RP08069 1367 aa23.42■■□□□ 1.34
SNRPC-201ENST00000244520 NUP160Q12769 1436 aa23.42■■□□□ 1.34
SNRPC-201ENST00000244520 ERCC6L2Q5T890 1561 aa23.41■■□□□ 1.34
SNRPC-201ENST00000244520 RUSC2Q8N2Y8 1516 aa23.35■■□□□ 1.33
SNRPC-201ENST00000244520 CARMIL1Q5VZK9 1371 aa23.29■■□□□ 1.32
SNRPC-201ENST00000244520 CUL7Q14999 1698 aa23.29■■□□□ 1.32
SNRPC-201ENST00000244520 JPH4Q96JJ6 628 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms