RNA–Protein interactions for RNA: ENST00000236017.5

APH1A-201, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-201ENST00000236017 YBX3P16989 372 aaKnown RBP eCLIP24.69■■□□□ 1.544e-10■■□□□ 12.7
APH1A-201ENST00000236017 METAP2P50579 478 aaKnown RBP eCLIP20.55■□□□□ 0.887e-10■■■■■ 41
APH1A-201ENST00000236017 DDX3XO00571 662 aaKnown RBP eCLIP18.08■□□□□ 0.487e-10■■■■■ 30.6
APH1A-201ENST00000236017 SND1Q7KZF4 910 aaKnown RBP eCLIP18.65■□□□□ 0.589e-9■□□□□ 8.5
APH1A-201ENST00000236017 EFTUD2Q15029 972 aaKnown RBP eCLIP16.81■□□□□ 0.282e-8■■■■■ 38.4
APH1A-201ENST00000236017 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.71■■■□□ 2.356e-8■■■■□ 20.3
APH1A-201ENST00000236017 PCBP1Q15365 356 aaKnown RBP eCLIP20.15■□□□□ 0.828e-8■■□□□ 13.7
APH1A-201ENST00000236017 RPS3P23396 243 aaKnown RBP eCLIP17.29■□□□□ 0.363e-7■■■■■ 39.2
APH1A-201ENST00000236017 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.57■□□□□ 0.082e-6■■■■□ 24
APH1A-201ENST00000236017 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.79■□□□□ 0.924e-6■□□□□ 8.4
APH1A-201ENST00000236017 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.27■■■□□ 2.125e-6■■■■■ 46.2
APH1A-201ENST00000236017 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.26■□□□□ 0.999e-6■■■■■ 27.7
Retrieved 12 of 12 RNA–protein pairs in 5.1 ms