RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 AEBP2Q6ZN18 517 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC13-201ENST00000231526 CHIC1Q5VXU3 224 aa13.05□□□□□ -0.32
TRAPPC13-201ENST00000231526 SENP3Q9H4L4 574 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC13-201ENST00000231526 NISCHQ9Y2I1 1504 aa11.8□□□□□ -0.52
TRAPPC13-201ENST00000231526 PHF23Q9BUL5 403 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC13-201ENST00000231526 FOXD1Q16676 465 aa10.85□□□□□ -0.67
TRAPPC13-201ENST00000231526 MSH5O43196 834 aa10.63□□□□□ -0.71
TRAPPC13-201ENST00000231526 EHMT2Q96KQ7 1210 aa10.51□□□□□ -0.73
TRAPPC13-201ENST00000231526 ADRA2BP18089 450 aa10.4□□□□□ -0.74
TRAPPC13-201ENST00000231526 PLPPR3Q6T4P5 718 aa10.4□□□□□ -0.75
TRAPPC13-201ENST00000231526 POTEDQ86YR6 584 aa10.38□□□□□ -0.75
TRAPPC13-201ENST00000231526 KCNA4P22459 653 aa10.24□□□□□ -0.77
TRAPPC13-201ENST00000231526 CCDC180Q9P1Z9 1646 aa10.2□□□□□ -0.78
TRAPPC13-201ENST00000231526 PIAS4Q8N2W9 510 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC13-201ENST00000231526 PPP6R1Q9UPN7 881 aa10.14□□□□□ -0.79
TRAPPC13-201ENST00000231526 SLC24A1O60721 1099 aa10.11□□□□□ -0.79
TRAPPC13-201ENST00000231526 DCAF8L2P0C7V8 631 aa9.92□□□□□ -0.82
TRAPPC13-201ENST00000231526 ZCCHC6Q5VYS8 1495 aaKnown RBP9.91□□□□□ -0.82
TRAPPC13-201ENST00000231526 CSRNP3Q8WYN3 585 aa9.85□□□□□ -0.83
TRAPPC13-201ENST00000231526 SHROOM4Q9ULL8 1493 aa9.81□□□□□ -0.84
TRAPPC13-201ENST00000231526 ABCC9O60706 1549 aa9.72□□□□□ -0.85
TRAPPC13-201ENST00000231526 DCAF1Q9Y4B6 1507 aa9.7□□□□□ -0.86
TRAPPC13-201ENST00000231526 SLC4A1APQ9BWU0 796 aaKnown RBP9.59□□□□□ -0.87
TRAPPC13-201ENST00000231526 ZBTB22O15209 634 aa9.57□□□□□ -0.88
TRAPPC13-201ENST00000231526 MYO15BQ96JP2 1530 aa9.55□□□□□ -0.88
TRAPPC13-201ENST00000231526 SCAF1Q9H7N4 1312 aaKnown RBP9.54□□□□□ -0.88
TRAPPC13-201ENST00000231526 NACADO15069 1562 aa9.51□□□□□ -0.89
TRAPPC13-201ENST00000231526 SUPT5HO00267 1087 aaKnown RBP9.5□□□□□ -0.89
TRAPPC13-201ENST00000231526 SCRIBQ14160 1630 aa9.48□□□□□ -0.89
TRAPPC13-201ENST00000231526 RB1CC1Q8TDY2 1594 aa9.44□□□□□ -0.9
TRAPPC13-201ENST00000231526 PPP4R3CPQ6ZMV5 832 aa9.43□□□□□ -0.9
TRAPPC13-201ENST00000231526 RTN4Q9NQC3 1192 aaKnown RBP9.39□□□□□ -0.91
TRAPPC13-201ENST00000231526 DMRT2Q9Y5R5 561 aa9.38□□□□□ -0.91
TRAPPC13-201ENST00000231526 NPM3O75607 178 aaKnown RBP9.34□□□□□ -0.91
TRAPPC13-201ENST00000231526 UNC13AQ9UPW8 1703 aa9.24□□□□□ -0.93
TRAPPC13-201ENST00000231526 PABPN1Q86U42 306 aaKnown RBP eCLIP9.22□□□□□ -0.93
TRAPPC13-201ENST00000231526 CECR2Q9BXF3 1484 aa9.21□□□□□ -0.94
TRAPPC13-201ENST00000231526 RSF1Q96T23 1441 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC13-201ENST00000231526 DAXXQ9UER7 740 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC13-201ENST00000231526 MROH2BQ7Z745 1585 aa9.14□□□□□ -0.95
TRAPPC13-201ENST00000231526 BICRAQ9NZM4 1560 aa9.14□□□□□ -0.95
TRAPPC13-201ENST00000231526 BAZ1AQ9NRL2 1556 aaPredicted RBP9.11□□□□□ -0.95
TRAPPC13-201ENST00000231526 MAPK8IP2Q13387 824 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC13-201ENST00000231526 WIZO95785 1651 aa9.07□□□□□ -0.96
TRAPPC13-201ENST00000231526 DNAJC5BQ9UF47 199 aa9.06□□□□□ -0.96
TRAPPC13-201ENST00000231526 SMARCA4P51532 1647 aa9.05□□□□□ -0.96
TRAPPC13-201ENST00000231526 CACNB1Q02641 598 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC13-201ENST00000231526 NCBP3Q53F19 620 aaKnown RBP8.99□□□□□ -0.97
TRAPPC13-201ENST00000231526 HOXD11P31277 338 aaPredicted RBP8.96□□□□□ -0.97
TRAPPC13-201ENST00000231526 TOP2AP11388 1531 aaKnown RBP8.94□□□□□ -0.98
TRAPPC13-201ENST00000231526 ATAD2BQ9ULI0 1458 aa8.91□□□□□ -0.98
TRAPPC13-201ENST00000231526 CNKSR2Q8WXI2 1034 aa8.9□□□□□ -0.98
TRAPPC13-201ENST00000231526 PEG3Q9GZU2 1588 aa8.9□□□□□ -0.98
TRAPPC13-201ENST00000231526 C1QBPQ07021 282 aaKnown RBP8.89□□□□□ -0.99
TRAPPC13-201ENST00000231526 TRIM41Q8WV44 630 aa8.89□□□□□ -0.99
TRAPPC13-201ENST00000231526 CCDC88BA6NC98 1476 aa8.89□□□□□ -0.99
TRAPPC13-201ENST00000231526 SMARCA2P51531 1590 aa8.89□□□□□ -0.99
TRAPPC13-201ENST00000231526 EIF4G1Q04637 1599 aaKnown RBP8.89□□□□□ -0.99
TRAPPC13-201ENST00000231526 RNF216Q9NWF9 866 aaPredicted RBP8.89□□□□□ -0.99
TRAPPC13-201ENST00000231526 BAZ1BQ9UIG0 1483 aaKnown RBP8.88□□□□□ -0.99
TRAPPC13-201ENST00000231526 FKBP8Q14318 412 aa8.86□□□□□ -0.99
TRAPPC13-201ENST00000231526 RNF39Q9H2S5 420 aa8.84□□□□□ -0.99
TRAPPC13-201ENST00000231526 FOXD4L1Q9NU39 408 aa8.84□□□□□ -0.99
TRAPPC13-201ENST00000231526 TTBK1Q5TCY1 1321 aaPredicted RBP8.81□□□□□ -1
TRAPPC13-201ENST00000231526 AMER1Q5JTC6 1135 aaPredicted RBP8.8□□□□□ -1
TRAPPC13-201ENST00000231526 NCAPD3P42695 1498 aa8.8□□□□□ -1
TRAPPC13-201ENST00000231526 APLP2Q06481 763 aa8.8□□□□□ -1
TRAPPC13-201ENST00000231526 PRKCSHP14314 528 aaPredicted RBP8.79□□□□□ -1
TRAPPC13-201ENST00000231526 DCAF8L1A6NGE4 600 aa8.78□□□□□ -1
TRAPPC13-201ENST00000231526 FAM9AQ8IZU1 332 aaPredicted RBP8.78□□□□□ -1
TRAPPC13-201ENST00000231526 MYT1Q01538 1121 aa8.77□□□□□ -1.01
TRAPPC13-201ENST00000231526 HMGXB3Q12766 1538 aa8.77□□□□□ -1.01
TRAPPC13-201ENST00000231526 LOC105371045A0A1W2PR82 267 aa8.76□□□□□ -1.01
TRAPPC13-201ENST00000231526 SLC4A2P04920 1241 aa8.75□□□□□ -1.01
TRAPPC13-201ENST00000231526 ABCC8Q09428 1581 aa8.75□□□□□ -1.01
TRAPPC13-201ENST00000231526 CC2D2AQ9P2K1 1620 aa8.74□□□□□ -1.01
TRAPPC13-201ENST00000231526 PELP1Q8IZL8 1130 aaKnown RBP8.71□□□□□ -1.01
TRAPPC13-201ENST00000231526 WRNQ14191 1432 aaPredicted RBP eCLIP8.68□□□□□ -1.02
TRAPPC13-201ENST00000231526 ERICH6Q7L0X2 663 aa8.65□□□□□ -1.03
TRAPPC13-201ENST00000231526 ATF5Q9Y2D1 282 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC13-201ENST00000231526 CFTRP13569 1480 aa8.63□□□□□ -1.03
TRAPPC13-201ENST00000231526 ARXQ96QS3 562 aa8.63□□□□□ -1.03
TRAPPC13-201ENST00000231526 CADPSQ9ULU8 1353 aa8.62□□□□□ -1.03
TRAPPC13-201ENST00000231526 SYNJ1O43426 1573 aa8.61□□□□□ -1.03
TRAPPC13-201ENST00000231526 SOGA1O94964 1423 aa8.61□□□□□ -1.03
TRAPPC13-201ENST00000231526 TIMELESSQ9UNS1 1208 aa8.6□□□□□ -1.03
TRAPPC13-201ENST00000231526 RUSC2Q8N2Y8 1516 aa8.57□□□□□ -1.04
TRAPPC13-201ENST00000231526 EEA1Q15075 1411 aa8.56□□□□□ -1.04
TRAPPC13-201ENST00000231526 TOP2BQ02880 1626 aa8.55□□□□□ -1.04
TRAPPC13-201ENST00000231526 NESP48681 1621 aa8.54□□□□□ -1.04
TRAPPC13-201ENST00000231526 PRDM2Q13029 1718 aa8.54□□□□□ -1.04
TRAPPC13-201ENST00000231526 UBTFP17480 764 aaKnown RBP8.53□□□□□ -1.04
TRAPPC13-201ENST00000231526 CUX1P39880 1505 aa8.53□□□□□ -1.04
TRAPPC13-201ENST00000231526 FANCD2Q9BXW9 1451 aa8.52□□□□□ -1.05
TRAPPC13-201ENST00000231526 BIVM-ERCC5R4GMW8 1640 aa8.52□□□□□ -1.05
TRAPPC13-201ENST00000231526 LAMC3Q9Y6N6 1575 aa8.49□□□□□ -1.05
TRAPPC13-201ENST00000231526 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.49□□□□□ -1.05
TRAPPC13-201ENST00000231526 PDS5BQ9NTI5 1447 aa8.46□□□□□ -1.05
TRAPPC13-201ENST00000231526 GOLGA3Q08378 1498 aa8.46□□□□□ -1.05
TRAPPC13-201ENST00000231526 CEP164Q9UPV0 1460 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms