RNA–Protein interactions for RNA: ENST00000229416.10

GCLC-201, Transcript of glutamate-cysteine ligase catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCLC, Length 3,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCLC-201ENST00000229416 NISCHQ9Y2I1 1504 aa28.35■■■□□ 2.13
GCLC-201ENST00000229416 DCAF8L2P0C7V8 631 aa26.82■■□□□ 1.88
GCLC-201ENST00000229416 SHROOM4Q9ULL8 1493 aa26.08■■□□□ 1.76
GCLC-201ENST00000229416 SUPT5HO00267 1087 aaKnown RBP25.77■■□□□ 1.72
GCLC-201ENST00000229416 EHMT2Q96KQ7 1210 aa24.76■■□□□ 1.55
GCLC-201ENST00000229416 PELP1Q8IZL8 1130 aaKnown RBP24.69■■□□□ 1.54
GCLC-201ENST00000229416 FAM9AQ8IZU1 332 aaPredicted RBP24.21■■□□□ 1.47
GCLC-201ENST00000229416 MYT1Q01538 1121 aa24.19■■□□□ 1.46
GCLC-201ENST00000229416 ABCC9O60706 1549 aa23.88■■□□□ 1.41
GCLC-201ENST00000229416 ZCCHC6Q5VYS8 1495 aaKnown RBP23.72■■□□□ 1.39
GCLC-201ENST00000229416 TTBK1Q5TCY1 1321 aaPredicted RBP23.72■■□□□ 1.39
GCLC-201ENST00000229416 LOC105371045A0A1W2PR82 267 aa23.67■■□□□ 1.38
GCLC-201ENST00000229416 PCGF6Q9BYE7 350 aa23.65■■□□□ 1.38
GCLC-201ENST00000229416 CHIC1Q5VXU3 224 aa23.63■■□□□ 1.37
GCLC-201ENST00000229416 CCDC180Q9P1Z9 1646 aa23.58■■□□□ 1.37
GCLC-201ENST00000229416 TRIM41Q8WV44 630 aa23.57■■□□□ 1.36
GCLC-201ENST00000229416 PABPN1Q86U42 306 aaKnown RBP eCLIP23.53■■□□□ 1.36
GCLC-201ENST00000229416 PPARGC1BQ86YN6 1023 aaKnown RBP23.49■■□□□ 1.35
GCLC-201ENST00000229416 RANGAP1P46060 587 aaPredicted RBP23.49■■□□□ 1.35
GCLC-201ENST00000229416 HRCP23327 699 aa23.26■■□□□ 1.31
GCLC-201ENST00000229416 SCRIBQ14160 1630 aa23.07■■□□□ 1.28
GCLC-201ENST00000229416 UBTFP17480 764 aaKnown RBP22.96■■□□□ 1.27
GCLC-201ENST00000229416 SCAF1Q9H7N4 1312 aaKnown RBP22.74■■□□□ 1.23
GCLC-201ENST00000229416 MYO15BQ96JP2 1530 aa22.74■■□□□ 1.23
GCLC-201ENST00000229416 DCAF1Q9Y4B6 1507 aa22.64■■□□□ 1.22
GCLC-201ENST00000229416 ATP1B4Q9UN42 357 aaPredicted RBP22.63■■□□□ 1.21
GCLC-201ENST00000229416 APLP2Q06481 763 aa22.61■■□□□ 1.21
GCLC-201ENST00000229416 RSF1Q96T23 1441 aaPredicted RBP22.57■■□□□ 1.2
GCLC-201ENST00000229416 BCL11AQ9H165 835 aa22.53■■□□□ 1.2
GCLC-201ENST00000229416 CECR2Q9BXF3 1484 aa22.51■■□□□ 1.19
GCLC-201ENST00000229416 PRKCSHP14314 528 aaPredicted RBP22.5■■□□□ 1.19
GCLC-201ENST00000229416 CCER1Q8TC90 406 aaPredicted RBP22.49■■□□□ 1.19
GCLC-201ENST00000229416 TRIM26Q12899 539 aaPredicted RBP22.48■■□□□ 1.19
GCLC-201ENST00000229416 CENPBP07199 599 aaPredicted RBP22.42■■□□□ 1.18
GCLC-201ENST00000229416 ERICH6Q7L0X2 663 aa22.37■■□□□ 1.17
GCLC-201ENST00000229416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.35■■□□□ 1.17
GCLC-201ENST00000229416 NACADO15069 1562 aa22.33■■□□□ 1.17
GCLC-201ENST00000229416 HNRNPUL2Q1KMD3 747 aaKnown RBP22.32■■□□□ 1.16
GCLC-201ENST00000229416 ITGAEP38570 1179 aa22.32■■□□□ 1.16
GCLC-201ENST00000229416 GTF3C3Q9Y5Q9 886 aa22.27■■□□□ 1.16
GCLC-201ENST00000229416 RB1CC1Q8TDY2 1594 aa22.24■■□□□ 1.15
GCLC-201ENST00000229416 MROH2BQ7Z745 1585 aa22.2■■□□□ 1.14
GCLC-201ENST00000229416 CSRNP3Q8WYN3 585 aa22.06■■□□□ 1.12
GCLC-201ENST00000229416 P3H3Q8IVL6 736 aa22.02■■□□□ 1.12
GCLC-201ENST00000229416 WIZO95785 1651 aa21.98■■□□□ 1.11
GCLC-201ENST00000229416 YTHDC1Q96MU7 727 aaKnown RBP21.94■■□□□ 1.1
GCLC-201ENST00000229416 ACIN1Q9UKV3 1341 aaKnown RBP21.94■■□□□ 1.1
GCLC-201ENST00000229416 ZEB1P37275 1124 aaPredicted RBP21.92■■□□□ 1.1
GCLC-201ENST00000229416 ARID3CA6NKF2 412 aa21.88■■□□□ 1.09
GCLC-201ENST00000229416 NEUROD1Q13562 356 aa21.88■■□□□ 1.09
GCLC-201ENST00000229416 BAZ1AQ9NRL2 1556 aaPredicted RBP21.84■■□□□ 1.09
GCLC-201ENST00000229416 ABCC8Q09428 1581 aa21.73■■□□□ 1.07
GCLC-201ENST00000229416 CCDC88BA6NC98 1476 aa21.72■■□□□ 1.07
GCLC-201ENST00000229416 SOGA1O94964 1423 aa21.71■■□□□ 1.07
GCLC-201ENST00000229416 FBLN2P98095 1184 aa21.66■■□□□ 1.06
GCLC-201ENST00000229416 FAM50AQ14320 339 aaKnown RBP21.65■■□□□ 1.06
GCLC-201ENST00000229416 BAZ1BQ9UIG0 1483 aaKnown RBP21.57■■□□□ 1.04
GCLC-201ENST00000229416 SMARCA4P51532 1647 aa21.54■■□□□ 1.04
GCLC-201ENST00000229416 WRNQ14191 1432 aaPredicted RBP eCLIP21.53■■□□□ 1.04
GCLC-201ENST00000229416 CNGB1Q14028 1251 aaPredicted RBP21.53■■□□□ 1.04
GCLC-201ENST00000229416 ANP32EQ9BTT0 268 aa21.51■■□□□ 1.03
GCLC-201ENST00000229416 DIEXFQ68CQ4 756 aaKnown RBP21.51■■□□□ 1.03
GCLC-201ENST00000229416 RUSC2Q8N2Y8 1516 aa21.47■■□□□ 1.03
GCLC-201ENST00000229416 TOP2AP11388 1531 aaKnown RBP21.46■■□□□ 1.03
GCLC-201ENST00000229416 CEP162Q5TB80 1403 aa21.43■■□□□ 1.02
GCLC-201ENST00000229416 ATAD2BQ9ULI0 1458 aa21.35■■□□□ 1.01
GCLC-201ENST00000229416 SMARCA2P51531 1590 aa21.33■■□□□ 1
GCLC-201ENST00000229416 CLIP1P30622 1438 aa21.32■■□□□ 1
GCLC-201ENST00000229416 BICRAQ9NZM4 1560 aa21.29■■□□□ 1
GCLC-201ENST00000229416 POLR3GLQ9BT43 218 aa21.27■■□□□ 1
GCLC-201ENST00000229416 SLC24A1O60721 1099 aa21.24■□□□□ 0.99
GCLC-201ENST00000229416 UNC13AQ9UPW8 1703 aa21.24■□□□□ 0.99
GCLC-201ENST00000229416 TRIM52Q96A61 297 aa21.2■□□□□ 0.98
GCLC-201ENST00000229416 DNAJC5BQ9UF47 199 aa21.2■□□□□ 0.98
GCLC-201ENST00000229416 CHIC2Q9UKJ5 165 aa21.17■□□□□ 0.98
GCLC-201ENST00000229416 HIRIP3Q9BW71 556 aaPredicted RBP21.15■□□□□ 0.98
GCLC-201ENST00000229416 TNIKQ9UKE5 1360 aa21.15■□□□□ 0.98
GCLC-201ENST00000229416 EIF5BO60841 1220 aaKnown RBP21.15■□□□□ 0.98
GCLC-201ENST00000229416 GOLGA3Q08378 1498 aa21.15■□□□□ 0.98
GCLC-201ENST00000229416 KANK4Q5T7N3 995 aaPredicted RBP21.14■□□□□ 0.98
GCLC-201ENST00000229416 MYT1LQ9UL68 1186 aa21.14■□□□□ 0.97
GCLC-201ENST00000229416 ANO8Q9HCE9 1232 aaPredicted RBP21.13■□□□□ 0.97
GCLC-201ENST00000229416 ZNF777Q9ULD5 760 aaPredicted RBP21.13■□□□□ 0.97
GCLC-201ENST00000229416 CCDC136Q96JN2 1154 aa21.11■□□□□ 0.97
GCLC-201ENST00000229416 EEA1Q15075 1411 aa21.06■□□□□ 0.96
GCLC-201ENST00000229416 ZNF316A6NFI3 1004 aaPredicted RBP21.04■□□□□ 0.96
GCLC-201ENST00000229416 ZNF326Q5BKZ1 582 aaKnown RBP21.04■□□□□ 0.96
GCLC-201ENST00000229416 CUX2O14529 1486 aa21.03■□□□□ 0.96
GCLC-201ENST00000229416 TDRD9Q8NDG6 1382 aaKnown RBP21.02■□□□□ 0.96
GCLC-201ENST00000229416 RAPGEF2Q9Y4G8 1499 aa21.01■□□□□ 0.95
GCLC-201ENST00000229416 KIF27Q86VH2 1401 aa21■□□□□ 0.95
GCLC-201ENST00000229416 CEP164Q9UPV0 1460 aa21■□□□□ 0.95
GCLC-201ENST00000229416 BCANQ96GW7 911 aa20.97■□□□□ 0.95
GCLC-201ENST00000229416 EIF4G1Q04637 1599 aaKnown RBP20.95■□□□□ 0.94
GCLC-201ENST00000229416 MIER1Q8N108 512 aa20.92■□□□□ 0.94
GCLC-201ENST00000229416 SYNJ1O43426 1573 aa20.92■□□□□ 0.94
GCLC-201ENST00000229416 RRP7BPQ9NSQ0 103 aa20.91■□□□□ 0.94
GCLC-201ENST00000229416 CARMIL1Q5VZK9 1371 aa20.9■□□□□ 0.94
GCLC-201ENST00000229416 CHMP7Q8WUX9 453 aaPredicted RBP20.88■□□□□ 0.93
GCLC-201ENST00000229416 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms