RNA–Protein interactions for RNA: ENST00000215904.6

PDXP-201, Transcript of pyridoxal phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXP, Length 2,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXP-201ENST00000215904 UTP3Q9NQZ2 479 aaKnown RBP eCLIP30.04■■■□□ 2.44e-7■■■■■ 62.6
PDXP-201ENST00000215904 DDX3XO00571 662 aaKnown RBP eCLIP30.33■■■□□ 2.451e-8■■■■■ 48.5
PDXP-201ENST00000215904 PABPC4Q13310 644 aaKnown RBP eCLIP30.9■■■□□ 2.542e-8■■■■■ 43.7
PDXP-201ENST00000215904 DDX6P26196 483 aaKnown RBP eCLIP27.61■■■□□ 2.015e-11■■■■■ 34.8
PDXP-201ENST00000215904 WDR3Q9UNX4 943 aaKnown RBP eCLIP29.47■■■□□ 2.319e-7■■■■■ 31.6
PDXP-201ENST00000215904 PCBP1Q15365 356 aaKnown RBP eCLIP29.45■■■□□ 2.314e-11■■■■■ 31.2
PDXP-201ENST00000215904 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.71■■■■□ 3.953e-9■■■■■ 29.5
PDXP-201ENST00000215904 PCBP2Q15366 365 aaKnown RBP eCLIP27.56■■■□□ 24e-12■■■■□ 25.6
PDXP-201ENST00000215904 AQRO60306 1485 aaKnown RBP eCLIP42■■■■■ 4.317e-7■■■■□ 22.3
PDXP-201ENST00000215904 SF3B4Q15427 424 aaKnown RBP eCLIP24.73■■□□□ 1.554e-12■■■■□ 22
PDXP-201ENST00000215904 UPF1Q92900 1129 aaKnown RBP eCLIP30.21■■■□□ 2.432e-7■■■■□ 20.8
PDXP-201ENST00000215904 SLTMQ9NWH9 1034 aaKnown RBP eCLIP29.83■■■□□ 2.372e-6■■■□□ 19.1
PDXP-201ENST00000215904 AKAP1Q92667 903 aaKnown RBP eCLIP24.82■■□□□ 1.563e-9■■■□□ 18.4
PDXP-201ENST00000215904 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.74■■■□□ 2.192e-11■■■□□ 16
PDXP-201ENST00000215904 LARP4Q71RC2 724 aaKnown RBP eCLIP27.72■■■□□ 2.033e-7■■■□□ 14.7
PDXP-201ENST00000215904 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.47■■■□□ 2.471e-6■■□□□ 13.1
PDXP-201ENST00000215904 TIA1P31483 386 aaKnown RBP eCLIP26.89■■□□□ 1.895e-8■■□□□ 12.5
PDXP-201ENST00000215904 RBM15Q96T37 977 aaKnown RBP eCLIP29.23■■■□□ 2.274e-6■■□□□ 11.7
PDXP-201ENST00000215904 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.17■■■□□ 2.423e-9■■□□□ 11.5
PDXP-201ENST00000215904 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.48■■■□□ 2.158e-6■□□□□ 10.8
PDXP-201ENST00000215904 TBRG4Q969Z0 631 aaKnown RBP eCLIP27.68■■■□□ 2.021e-6■□□□□ 10.8
PDXP-201ENST00000215904 TIAL1Q01085 375 aaKnown RBP eCLIP27.93■■■□□ 2.069e-7■□□□□ 9.8
PDXP-201ENST00000215904 EFTUD2Q15029 972 aaKnown RBP eCLIP28.89■■■□□ 2.219e-6■□□□□ 9.6
PDXP-201ENST00000215904 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.07■■■□□ 2.47e-7■□□□□ 8.5
PDXP-201ENST00000215904 FTOQ9C0B1 505 aaKnown RBP eCLIP32.53■■■□□ 2.84e-8■□□□□ 8.5
PDXP-201ENST00000215904 HNRNPCP07910 306 aaKnown RBP eCLIP25.56■■□□□ 1.684e-8■□□□□ 8.5
PDXP-201ENST00000215904 ILF3Q12906 894 aaKnown RBP eCLIP26.3■■□□□ 1.82e-6■□□□□ 8.3
Retrieved 27 of 27 RNA–protein pairs in 7.2 ms