RNA–Protein interactions for RNA: ENST00000044462.11

PSMA4-201, Transcript of proteasome subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMA4, Length 4,411 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-201ENST00000044462 NISCHQ9Y2I1 1504 aa11.36□□□□□ -0.59
PSMA4-201ENST00000044462 CCDC180Q9P1Z9 1646 aa10.12□□□□□ -0.79
PSMA4-201ENST00000044462 ZCCHC6Q5VYS8 1495 aaKnown RBP9.69□□□□□ -0.86
PSMA4-201ENST00000044462 DCAF1Q9Y4B6 1507 aa9.62□□□□□ -0.87
PSMA4-201ENST00000044462 MYO15BQ96JP2 1530 aa9.48□□□□□ -0.89
PSMA4-201ENST00000044462 DCAF8L2P0C7V8 631 aa9.41□□□□□ -0.9
PSMA4-201ENST00000044462 UNC13AQ9UPW8 1703 aa9.38□□□□□ -0.91
PSMA4-201ENST00000044462 ABCC9O60706 1549 aa9.15□□□□□ -0.94
PSMA4-201ENST00000044462 NACADO15069 1562 aa9.12□□□□□ -0.95
PSMA4-201ENST00000044462 BICRAQ9NZM4 1560 aa9.08□□□□□ -0.96
PSMA4-201ENST00000044462 EIF4G1Q04637 1599 aaKnown RBP9.05□□□□□ -0.96
PSMA4-201ENST00000044462 SCRIBQ14160 1630 aa8.94□□□□□ -0.98
PSMA4-201ENST00000044462 PEG3Q9GZU2 1588 aa8.92□□□□□ -0.98
PSMA4-201ENST00000044462 RB1CC1Q8TDY2 1594 aa8.91□□□□□ -0.98
PSMA4-201ENST00000044462 BAZ1AQ9NRL2 1556 aaPredicted RBP8.81□□□□□ -1
PSMA4-201ENST00000044462 MROH2BQ7Z745 1585 aa8.79□□□□□ -1
PSMA4-201ENST00000044462 WIZO95785 1651 aa8.79□□□□□ -1
PSMA4-201ENST00000044462 SMARCA4P51532 1647 aa8.79□□□□□ -1
PSMA4-201ENST00000044462 SHROOM4Q9ULL8 1493 aa8.77□□□□□ -1.01
PSMA4-201ENST00000044462 CECR2Q9BXF3 1484 aa8.77□□□□□ -1.01
PSMA4-201ENST00000044462 RSF1Q96T23 1441 aaPredicted RBP8.77□□□□□ -1.01
PSMA4-201ENST00000044462 PRDM2Q13029 1718 aa8.66□□□□□ -1.02
PSMA4-201ENST00000044462 SMARCA2P51531 1590 aa8.65□□□□□ -1.02
PSMA4-201ENST00000044462 TOP2AP11388 1531 aaKnown RBP8.64□□□□□ -1.03
PSMA4-201ENST00000044462 PELP1Q8IZL8 1130 aaKnown RBP8.55□□□□□ -1.04
PSMA4-201ENST00000044462 HMGXB3Q12766 1538 aa8.53□□□□□ -1.04
PSMA4-201ENST00000044462 PABPN1Q86U42 306 aaKnown RBP eCLIP8.49□□□□□ -1.05
PSMA4-201ENST00000044462 BIVM-ERCC5R4GMW8 1640 aa8.46□□□□□ -1.06
PSMA4-201ENST00000044462 ATAD2BQ9ULI0 1458 aa8.46□□□□□ -1.06
PSMA4-201ENST00000044462 CCDC88BA6NC98 1476 aa8.44□□□□□ -1.06
PSMA4-201ENST00000044462 WDR97A6NE52 1622 aa8.4□□□□□ -1.07
PSMA4-201ENST00000044462 NCAPD3P42695 1498 aa8.4□□□□□ -1.07
PSMA4-201ENST00000044462 MYT1Q01538 1121 aa8.38□□□□□ -1.07
PSMA4-201ENST00000044462 SYNJ1O43426 1573 aa8.38□□□□□ -1.07
PSMA4-201ENST00000044462 CC2D2AQ9P2K1 1620 aa8.34□□□□□ -1.08
PSMA4-201ENST00000044462 SUPT5HO00267 1087 aaKnown RBP8.32□□□□□ -1.08
PSMA4-201ENST00000044462 TOP2BQ02880 1626 aa8.32□□□□□ -1.08
PSMA4-201ENST00000044462 ABCC8Q09428 1581 aa8.31□□□□□ -1.08
PSMA4-201ENST00000044462 CHIC1Q5VXU3 224 aa8.29□□□□□ -1.08
PSMA4-201ENST00000044462 PRKCSHP14314 528 aaPredicted RBP8.27□□□□□ -1.09
PSMA4-201ENST00000044462 CFTRP13569 1480 aa8.26□□□□□ -1.09
PSMA4-201ENST00000044462 CUX1P39880 1505 aa8.23□□□□□ -1.09
PSMA4-201ENST00000044462 KIF21BO75037 1637 aa8.21□□□□□ -1.1
PSMA4-201ENST00000044462 BAZ1BQ9UIG0 1483 aaKnown RBP8.2□□□□□ -1.1
PSMA4-201ENST00000044462 KIF21AQ7Z4S6 1674 aa8.2□□□□□ -1.1
PSMA4-201ENST00000044462 RUSC2Q8N2Y8 1516 aa8.15□□□□□ -1.1
PSMA4-201ENST00000044462 TARBP1Q13395 1621 aaKnown RBP8.15□□□□□ -1.1
PSMA4-201ENST00000044462 LRRIQ1Q96JM4 1722 aa8.15□□□□□ -1.11
PSMA4-201ENST00000044462 ABCA5Q8WWZ7 1642 aa8.15□□□□□ -1.11
PSMA4-201ENST00000044462 LAMC3Q9Y6N6 1575 aa8.12□□□□□ -1.11
PSMA4-201ENST00000044462 THOC2Q8NI27 1593 aaKnown RBP8.1□□□□□ -1.11
PSMA4-201ENST00000044462 PPARGC1BQ86YN6 1023 aaKnown RBP8.09□□□□□ -1.11
PSMA4-201ENST00000044462 PRXQ9BXM0 1461 aa8.07□□□□□ -1.12
PSMA4-201ENST00000044462 ERICH3Q5RHP9 1530 aa8.06□□□□□ -1.12
PSMA4-201ENST00000044462 EHMT2Q96KQ7 1210 aa8.06□□□□□ -1.12
PSMA4-201ENST00000044462 SOGA1O94964 1423 aa8.06□□□□□ -1.12
PSMA4-201ENST00000044462 DNMBPQ6XZF7 1577 aa8.06□□□□□ -1.12
PSMA4-201ENST00000044462 SLC24A1O60721 1099 aa8.04□□□□□ -1.12
PSMA4-201ENST00000044462 URB2Q14146 1524 aaKnown RBP8.04□□□□□ -1.12
PSMA4-201ENST00000044462 PBRM1Q86U86 1689 aa8.04□□□□□ -1.12
PSMA4-201ENST00000044462 CTTNBP2Q8WZ74 1663 aa8.02□□□□□ -1.13
PSMA4-201ENST00000044462 WRNQ14191 1432 aaPredicted RBP eCLIP8.02□□□□□ -1.13
PSMA4-201ENST00000044462 NESP48681 1621 aa8.01□□□□□ -1.13
PSMA4-201ENST00000044462 WDR62O43379 1518 aa8□□□□□ -1.13
PSMA4-201ENST00000044462 DNAJC5BQ9UF47 199 aa7.99□□□□□ -1.13
PSMA4-201ENST00000044462 ABCA10Q8WWZ4 1543 aa7.98□□□□□ -1.13
PSMA4-201ENST00000044462 SAMD9Q5K651 1589 aa7.98□□□□□ -1.13
PSMA4-201ENST00000044462 TOPBP1Q92547 1522 aa7.97□□□□□ -1.13
PSMA4-201ENST00000044462 BCL11AQ9H165 835 aa7.96□□□□□ -1.13
PSMA4-201ENST00000044462 CADPSQ9ULU8 1353 aa7.96□□□□□ -1.14
PSMA4-201ENST00000044462 CUL7Q14999 1698 aa7.95□□□□□ -1.14
PSMA4-201ENST00000044462 CUX2O14529 1486 aa7.95□□□□□ -1.14
PSMA4-201ENST00000044462 EEA1Q15075 1411 aa7.95□□□□□ -1.14
PSMA4-201ENST00000044462 PCGF6Q9BYE7 350 aa7.95□□□□□ -1.14
PSMA4-201ENST00000044462 CFAP43Q8NDM7 1665 aa7.95□□□□□ -1.14
PSMA4-201ENST00000044462 POLA1P09884 1462 aaPredicted RBP7.94□□□□□ -1.14
PSMA4-201ENST00000044462 RAPGEF2Q9Y4G8 1499 aa7.93□□□□□ -1.14
PSMA4-201ENST00000044462 ERICH6Q7L0X2 663 aa7.92□□□□□ -1.14
PSMA4-201ENST00000044462 FGD5Q6ZNL6 1462 aa7.92□□□□□ -1.14
PSMA4-201ENST00000044462 ARAP1Q96P48 1450 aa7.92□□□□□ -1.14
PSMA4-201ENST00000044462 FANCD2Q9BXW9 1451 aa7.91□□□□□ -1.14
PSMA4-201ENST00000044462 ADAMTS12P58397 1594 aa7.9□□□□□ -1.15
PSMA4-201ENST00000044462 RANGAP1P46060 587 aaPredicted RBP7.87□□□□□ -1.15
PSMA4-201ENST00000044462 HRCP23327 699 aa7.87□□□□□ -1.15
PSMA4-201ENST00000044462 TTBK1Q5TCY1 1321 aaPredicted RBP7.87□□□□□ -1.15
PSMA4-201ENST00000044462 SCAF1Q9H7N4 1312 aaKnown RBP7.86□□□□□ -1.15
PSMA4-201ENST00000044462 TNIKQ9UKE5 1360 aa7.86□□□□□ -1.15
PSMA4-201ENST00000044462 EIF4G3O43432 1585 aaKnown RBP7.86□□□□□ -1.15
PSMA4-201ENST00000044462 LOC105371045A0A1W2PR82 267 aa7.85□□□□□ -1.15
PSMA4-201ENST00000044462 FAM9AQ8IZU1 332 aaPredicted RBP7.85□□□□□ -1.15
PSMA4-201ENST00000044462 CEP164Q9UPV0 1460 aa7.84□□□□□ -1.15
PSMA4-201ENST00000044462 ARHGEF11O15085 1522 aa7.83□□□□□ -1.16
PSMA4-201ENST00000044462 SHROOM2Q13796 1616 aa7.83□□□□□ -1.16
PSMA4-201ENST00000044462 SNAPC4Q5SXM2 1469 aa7.83□□□□□ -1.16
PSMA4-201ENST00000044462 GOLGA3Q08378 1498 aa7.83□□□□□ -1.16
PSMA4-201ENST00000044462 FBLN2P98095 1184 aa7.83□□□□□ -1.16
PSMA4-201ENST00000044462 ARHGAP35Q9NRY4 1499 aa7.82□□□□□ -1.16
PSMA4-201ENST00000044462 CENPBP07199 599 aaPredicted RBP7.82□□□□□ -1.16
PSMA4-201ENST00000044462 MAP3K1Q13233 1512 aa7.82□□□□□ -1.16
PSMA4-201ENST00000044462 IGF1RP08069 1367 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms