RNA–Protein interactions for RNA: ENST00000013034.3

NME1-201, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3 BASIC

Gene NME1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-201ENST00000013034 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.4□□□□□ -0.261e-16■□□□□ 8.4
NME1-201ENST00000013034 EIF3DO15371 548 aaKnown RBP eCLIP11.81□□□□□ -0.528e-13■■■□□ 17.2
NME1-201ENST00000013034 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.69□□□□□ -0.73e-11■■■■□ 23.2
NME1-201ENST00000013034 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.91■□□□□ 0.465e-11■■■■■ 54.8
NME1-201ENST00000013034 DDX3XO00571 662 aaKnown RBP eCLIP11.26□□□□□ -0.611e-9■■■□□ 18.4
NME1-201ENST00000013034 FTOQ9C0B1 505 aaKnown RBP eCLIP13.15□□□□□ -0.31e-9■■□□□ 12.6
NME1-201ENST00000013034 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.46□□□□□ -0.412e-9■■□□□ 13.1
NME1-201ENST00000013034 NIPBLQ6KC79 2804 aaeCLIP10.4□□□□□ -0.745e-9■■■□□ 19
NME1-201ENST00000013034 RPS3P23396 243 aaKnown RBP eCLIP10.54□□□□□ -0.725e-9■■■■□ 23.2
NME1-201ENST00000013034 PCBP2Q15366 365 aaKnown RBP eCLIP10.34□□□□□ -0.756e-9■□□□□ 8.1
NME1-201ENST00000013034 PUM1Q14671 1186 aaKnown RBP eCLIP12.46□□□□□ -0.411e-8■■■■■ 35.5
NME1-201ENST00000013034 YBX3P16989 372 aaKnown RBP eCLIP15.7■□□□□ 0.12e-8■■■□□ 16.9
NME1-201ENST00000013034 PABPC4Q13310 644 aaKnown RBP eCLIP13.83□□□□□ -0.23e-8■■■■□ 25.2
NME1-201ENST00000013034 SND1Q7KZF4 910 aaKnown RBP eCLIP11.56□□□□□ -0.564e-8■■□□□ 12.6
NME1-201ENST00000013034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.54■□□□□ 0.45e-8■□□□□ 8.5
NME1-201ENST00000013034 SF3B1O75533 1304 aaKnown RBP eCLIP12.41□□□□□ -0.425e-8■■■■■ 172.3
NME1-201ENST00000013034 XRCC6P12956 609 aaKnown RBP eCLIP12.3□□□□□ -0.441e-7■□□□□ 10
NME1-201ENST00000013034 LARP4Q71RC2 724 aaKnown RBP eCLIP10.31□□□□□ -0.761e-7■■■■□ 24.6
NME1-201ENST00000013034 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.83■□□□□ 0.61e-7■■■□□ 16
NME1-201ENST00000013034 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.53■□□□□ 0.084e-7■□□□□ 9.1
NME1-201ENST00000013034 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.14□□□□□ -0.155e-7■■■■□ 23.2
NME1-201ENST00000013034 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.81□□□□□ -0.846e-7■■■□□ 15.4
NME1-201ENST00000013034 AQRO60306 1485 aaKnown RBP eCLIP20.81■□□□□ 0.928e-7■■■□□ 16.8
NME1-201ENST00000013034 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13□□□□□ -0.338e-7■■■□□ 16
NME1-201ENST00000013034 G3BP1Q13283 466 aaKnown RBP eCLIP13.68□□□□□ -0.221e-6■■■□□ 18.9
Retrieved 25 of 25 RNA–protein pairs in 7.2 ms