RNA–Protein interactions for RNA: ENSMUST00000220629.1

Vrk1-204, Transcript of Serine/threonine-protein kinase VRK1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vrk1, Length 1,777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1-204ENSMUST00000220629 Chic1Q8CBW7 227 aa24.89■■□□□ 1.57
Vrk1-204ENSMUST00000220629 Plppr3Q7TPB0 716 aa23.32■■□□□ 1.32
Vrk1-204ENSMUST00000220629 Ube2uB1AUC4 352 aa23.03■■□□□ 1.28
Vrk1-204ENSMUST00000220629 Mapk8ip2Q9ERE9 830 aa22.92■■□□□ 1.26
Vrk1-204ENSMUST00000220629 Kcna4Q61423 654 aa22.7■■□□□ 1.22
Vrk1-204ENSMUST00000220629 Phf23Q8BSN5 401 aa22.68■■□□□ 1.22
Vrk1-204ENSMUST00000220629 Gab3Q8BSM5 595 aa22.22■■□□□ 1.15
Vrk1-204ENSMUST00000220629 Ppargc1bQ8VHJ7 1014 aa21.55■■□□□ 1.04
Vrk1-204ENSMUST00000220629 Senp3Q9EP97 568 aaKnown RBP21.48■■□□□ 1.03
Vrk1-204ENSMUST00000220629 Gm35339A0A140LHH9 1649 aa21.27■■□□□ 1
Vrk1-204ENSMUST00000220629 NischQ80TM9 1593 aa21.06■□□□□ 0.96
Vrk1-204ENSMUST00000220629 Ehmt2Q9Z148 1263 aaKnown RBP20.8■□□□□ 0.92
Vrk1-204ENSMUST00000220629 Abcc9P70170 1546 aa20.43■□□□□ 0.86
Vrk1-204ENSMUST00000220629 Slc4a1apE9PX68 744 aa20.39■□□□□ 0.86
Vrk1-204ENSMUST00000220629 Dmrt2Q8BG36 561 aa20.38■□□□□ 0.85
Vrk1-204ENSMUST00000220629 Fam71e1A1L3C1 212 aa20.34■□□□□ 0.85
Vrk1-204ENSMUST00000220629 Abcc8B2RUS7 1588 aa20.31■□□□□ 0.84
Vrk1-204ENSMUST00000220629 AcrbpQ3V140 540 aa19.43■□□□□ 0.7
Vrk1-204ENSMUST00000220629 ScribQ80U72 1612 aa19.4■□□□□ 0.7
Vrk1-204ENSMUST00000220629 Pde4cQ3UEI1 686 aa19.34■□□□□ 0.69
Vrk1-204ENSMUST00000220629 Prdm10Q3UTQ7 1184 aa19.32■□□□□ 0.68
Vrk1-204ENSMUST00000220629 Rtn4Q99P72 1162 aaKnown RBP19.22■□□□□ 0.67
Vrk1-204ENSMUST00000220629 Nlrp6Q91WS2 869 aa19.21■□□□□ 0.67
Vrk1-204ENSMUST00000220629 Ecm2Q5FW85 670 aa19.03■□□□□ 0.64
Vrk1-204ENSMUST00000220629 Tshz2Q68FE9 1030 aa18.98■□□□□ 0.63
Vrk1-204ENSMUST00000220629 Taok2Q6ZQ29 1240 aa18.97■□□□□ 0.63
Vrk1-204ENSMUST00000220629 Npm2Q80W85 207 aa18.97■□□□□ 0.63
Vrk1-204ENSMUST00000220629 Arid3aQ62431 601 aa18.96■□□□□ 0.63
Vrk1-204ENSMUST00000220629 Trap1aP19473 224 aa18.93■□□□□ 0.62
Vrk1-204ENSMUST00000220629 Prdm16A2A935 1275 aa18.91■□□□□ 0.62
Vrk1-204ENSMUST00000220629 NacadQ5SWP3 1504 aa18.83■□□□□ 0.6
Vrk1-204ENSMUST00000220629 Dcaf1Q80TR8 1506 aa18.82■□□□□ 0.6
Vrk1-204ENSMUST00000220629 Kdm5dQ62240 1548 aa18.82■□□□□ 0.6
Vrk1-204ENSMUST00000220629 Cdca7Q9D0M2 382 aa18.81■□□□□ 0.6
Vrk1-204ENSMUST00000220629 1700123L14RikQ3V2K7 440 aa18.77■□□□□ 0.6
Vrk1-204ENSMUST00000220629 Atf5O70191 283 aa18.73■□□□□ 0.59
Vrk1-204ENSMUST00000220629 Prm3Q62100 101 aa18.68■□□□□ 0.58
Vrk1-204ENSMUST00000220629 Ppp4r2Q0VGB7 417 aa18.5■□□□□ 0.55
Vrk1-204ENSMUST00000220629 CatipB9EKE5 520 aa18.48■□□□□ 0.55
Vrk1-204ENSMUST00000220629 ArxO35085 564 aa18.47■□□□□ 0.55
Vrk1-204ENSMUST00000220629 Sycp2Q9CUU3 1500 aa18.46■□□□□ 0.54
Vrk1-204ENSMUST00000220629 Vsig10D3YX43 558 aa18.4■□□□□ 0.54
Vrk1-204ENSMUST00000220629 Hs6st3Q9QYK4 470 aa18.37■□□□□ 0.53
Vrk1-204ENSMUST00000220629 Rb1cc1Q9ESK9 1588 aa18.36■□□□□ 0.53
Vrk1-204ENSMUST00000220629 Dnajc5bQ9CQ94 199 aa18.36■□□□□ 0.53
Vrk1-204ENSMUST00000220629 Rhox8Q6VSS7 320 aa18.35■□□□□ 0.53
Vrk1-204ENSMUST00000220629 Ttbk1Q6PCN3 1308 aa18.28■□□□□ 0.52
Vrk1-204ENSMUST00000220629 Hoxd11P23813 323 aa18.27■□□□□ 0.51
Vrk1-204ENSMUST00000220629 Ccdc180J3QNE4 1664 aa18.25■□□□□ 0.51
Vrk1-204ENSMUST00000220629 BicraF8VPZ9 1578 aa18.15■□□□□ 0.5
Vrk1-204ENSMUST00000220629 Baz1aO88379 1555 aa18.15■□□□□ 0.5
Vrk1-204ENSMUST00000220629 Styxl1Q9DAR2 321 aa18.11■□□□□ 0.49
Vrk1-204ENSMUST00000220629 Crybg2B7ZCC2 1516 aa18.1■□□□□ 0.49
Vrk1-204ENSMUST00000220629 MyclP10166 368 aa17.9■□□□□ 0.46
Vrk1-204ENSMUST00000220629 DiexfQ8BTT6 772 aaKnown RBP17.89■□□□□ 0.45
Vrk1-204ENSMUST00000220629 Riok3Q9DBU3 519 aaKnown RBP17.84■□□□□ 0.45
Vrk1-204ENSMUST00000220629 Zcchc6Q5BLK4 1491 aaKnown RBP17.77■□□□□ 0.44
Vrk1-204ENSMUST00000220629 Chrna2Q91X60 512 aa17.67■□□□□ 0.42
Vrk1-204ENSMUST00000220629 Smarca2Q6DIC0 1577 aa17.66■□□□□ 0.42
Vrk1-204ENSMUST00000220629 C1qtnf12Q8R2Z0 308 aa17.63■□□□□ 0.41
Vrk1-204ENSMUST00000220629 UbtfP25976 765 aaKnown RBP17.61■□□□□ 0.41
Vrk1-204ENSMUST00000220629 Rtl1Q7M732 1744 aa17.59■□□□□ 0.41
Vrk1-204ENSMUST00000220629 Pds5bQ4VA53 1446 aaKnown RBP17.57■□□□□ 0.4
Vrk1-204ENSMUST00000220629 Esf1Q3V1V3 845 aaKnown RBP17.54■□□□□ 0.4
Vrk1-204ENSMUST00000220629 Atad2bE9Q166 1460 aaKnown RBP17.48■□□□□ 0.39
Vrk1-204ENSMUST00000220629 Ripply1Q2WG77 201 aa17.46■□□□□ 0.39
Vrk1-204ENSMUST00000220629 Cecr2E9Q2Z1 1453 aa17.45■□□□□ 0.38
Vrk1-204ENSMUST00000220629 Smarca4Q3TKT4 1613 aaKnown RBP17.43■□□□□ 0.38
Vrk1-204ENSMUST00000220629 Skap1Q3UUV5 355 aa17.37■□□□□ 0.37
Vrk1-204ENSMUST00000220629 Rsph4aQ8BYM7 716 aa17.37■□□□□ 0.37
Vrk1-204ENSMUST00000220629 Tcf3P15806 651 aa17.35■□□□□ 0.37
Vrk1-204ENSMUST00000220629 Thoc2B1AZI6 1594 aaKnown RBP17.33■□□□□ 0.36
Vrk1-204ENSMUST00000220629 Iqgap2Q3UQ44 1575 aa17.29■□□□□ 0.36
Vrk1-204ENSMUST00000220629 Ercc6F8VPZ5 1481 aa17.17■□□□□ 0.34
Vrk1-204ENSMUST00000220629 Znf219Q6IQX8 726 aa17.16■□□□□ 0.34
Vrk1-204ENSMUST00000220629 Brd4Q9ESU6 1400 aaKnown RBP17.16■□□□□ 0.34
Vrk1-204ENSMUST00000220629 Ccdc136Q3TVA9 1136 aa17.15■□□□□ 0.34
Vrk1-204ENSMUST00000220629 CftrP26361 1476 aa17.14■□□□□ 0.33
Vrk1-204ENSMUST00000220629 Trim41Q5NCC3 630 aa17.12■□□□□ 0.33
Vrk1-204ENSMUST00000220629 Rimbp2Q80U40 1072 aa17.12■□□□□ 0.33
Vrk1-204ENSMUST00000220629 Wdr62Q3U3T8 1523 aa17.12■□□□□ 0.33
Vrk1-204ENSMUST00000220629 Bach1P97302 739 aa17.1■□□□□ 0.33
Vrk1-204ENSMUST00000220629 Synj1Q8CHC4 1574 aa17.1■□□□□ 0.33
Vrk1-204ENSMUST00000220629 Cttnbp2B9EJA2 1648 aa17.1■□□□□ 0.33
Vrk1-204ENSMUST00000220629 Ubap1lG3UW59 384 aa17.1■□□□□ 0.33
Vrk1-204ENSMUST00000220629 Mkrn3Q60764 544 aa17.09■□□□□ 0.33
Vrk1-204ENSMUST00000220629 Frmpd1A2AKB4 1549 aa17.09■□□□□ 0.33
Vrk1-204ENSMUST00000220629 Os9Q8K2C7 672 aa17.08■□□□□ 0.33
Vrk1-204ENSMUST00000220629 Stag3O70576 1240 aa17.06■□□□□ 0.32
Vrk1-204ENSMUST00000220629 Cc2d2aQ8CFW7 1633 aa17.04■□□□□ 0.32
Vrk1-204ENSMUST00000220629 Ppp6r1Q7TSI3 856 aa17.03■□□□□ 0.32
Vrk1-204ENSMUST00000220629 Skida1Q80YR3 822 aa17.02■□□□□ 0.31
Vrk1-204ENSMUST00000220629 Fam135aQ6NS59 1506 aa17■□□□□ 0.31
Vrk1-204ENSMUST00000220629 Ms4a5Q810P8 197 aa16.99■□□□□ 0.31
Vrk1-204ENSMUST00000220629 Pelp1Q9DBD5 1123 aaKnown RBP16.99■□□□□ 0.31
Vrk1-204ENSMUST00000220629 Tmem132aQ922P8 1018 aa16.96■□□□□ 0.31
Vrk1-204ENSMUST00000220629 WdpcpQ8C456 722 aa16.93■□□□□ 0.3
Vrk1-204ENSMUST00000220629 Phldb1Q6PDH0 1371 aaKnown RBP16.92■□□□□ 0.3
Vrk1-204ENSMUST00000220629 Dnajc5P60904 198 aa16.92■□□□□ 0.3
Vrk1-204ENSMUST00000220629 Zbtb38Q3LR78 1197 aa16.9■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms