RNA–Protein interactions for RNA: ENSMUST00000213647.1

Rnf111-204, Transcript of E3 ubiquitin-protein ligase Arkadia, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Rnf111, Length 4,961 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111-204ENSMUST00000213647 Rhox8Q6VSS7 320 aa35.82■■■■□ 3.32
Rnf111-204ENSMUST00000213647 Rpgrip1Q9EPQ2 1331 aa34.83■■■■□ 3.17
Rnf111-204ENSMUST00000213647 Las1lA2BE28 776 aaKnown RBP33.09■■■□□ 2.89
Rnf111-204ENSMUST00000213647 Ehmt2Q9Z148 1263 aaKnown RBP32.81■■■□□ 2.84
Rnf111-204ENSMUST00000213647 Cngb1E1AZ71 1325 aa32.68■■■□□ 2.82
Rnf111-204ENSMUST00000213647 Acin1Q9JIX8 1338 aaKnown RBP32.18■■■□□ 2.74
Rnf111-204ENSMUST00000213647 NischQ80TM9 1593 aa32.02■■■□□ 2.72
Rnf111-204ENSMUST00000213647 Wdr66E9Q743 1299 aa31.9■■■□□ 2.7
Rnf111-204ENSMUST00000213647 Ccdc136Q3TVA9 1136 aa31.88■■■□□ 2.69
Rnf111-204ENSMUST00000213647 Zeb1Q64318 1117 aa31.83■■■□□ 2.69
Rnf111-204ENSMUST00000213647 Pelp1Q9DBD5 1123 aaKnown RBP31.76■■■□□ 2.67
Rnf111-204ENSMUST00000213647 Ccdc180J3QNE4 1664 aa31.53■■■□□ 2.64
Rnf111-204ENSMUST00000213647 Trim41Q5NCC3 630 aa31.53■■■□□ 2.64
Rnf111-204ENSMUST00000213647 CenpbP27790 599 aa31.46■■■□□ 2.63
Rnf111-204ENSMUST00000213647 NefmP08553 848 aa31.41■■■□□ 2.62
Rnf111-204ENSMUST00000213647 Gab3Q8BSM5 595 aa31.25■■■□□ 2.59
Rnf111-204ENSMUST00000213647 Rtl1Q7M732 1744 aa31.25■■■□□ 2.59
Rnf111-204ENSMUST00000213647 Pcgf6Q99NA9 353 aa31.21■■■□□ 2.59
Rnf111-204ENSMUST00000213647 HrcG5E8J6 738 aa31.18■■■□□ 2.58
Rnf111-204ENSMUST00000213647 Esf1Q3V1V3 845 aaKnown RBP31.14■■■□□ 2.57
Rnf111-204ENSMUST00000213647 Myt1Q8CFC2 1127 aa31.09■■■□□ 2.57
Rnf111-204ENSMUST00000213647 Stra8P70278 393 aa30.72■■■□□ 2.51
Rnf111-204ENSMUST00000213647 Npm2Q80W85 207 aa30.66■■■□□ 2.5
Rnf111-204ENSMUST00000213647 Cdk11bP24788 784 aaKnown RBP30.65■■■□□ 2.5
Rnf111-204ENSMUST00000213647 Ube2uB1AUC4 352 aa30.6■■■□□ 2.49
Rnf111-204ENSMUST00000213647 Myt1lP97500 1187 aa30.52■■■□□ 2.48
Rnf111-204ENSMUST00000213647 UbtfP25976 765 aaKnown RBP30.47■■■□□ 2.47
Rnf111-204ENSMUST00000213647 Supt5hO55201 1082 aaKnown RBP30.38■■■□□ 2.45
Rnf111-204ENSMUST00000213647 Tnnt3Q9QZ47 272 aa30.29■■■□□ 2.44
Rnf111-204ENSMUST00000213647 Nop58Q6DFW4 536 aaKnown RBP30.28■■■□□ 2.44
Rnf111-204ENSMUST00000213647 Amer1Q7TS75 1132 aa30.21■■■□□ 2.43
Rnf111-204ENSMUST00000213647 Abcc9P70170 1546 aa30.08■■■□□ 2.41
Rnf111-204ENSMUST00000213647 Rtl5Q5DTT4 599 aa29.82■■■□□ 2.36
Rnf111-204ENSMUST00000213647 Slc24a1Q91WD8 1130 aa29.81■■■□□ 2.36
Rnf111-204ENSMUST00000213647 TonslQ6NZL6 1363 aa29.69■■■□□ 2.34
Rnf111-204ENSMUST00000213647 Mier1Q5UAK0 511 aa29.69■■■□□ 2.34
Rnf111-204ENSMUST00000213647 Dcaf1Q80TR8 1506 aa29.67■■■□□ 2.34
Rnf111-204ENSMUST00000213647 Neurod1Q60867 357 aa29.62■■■□□ 2.33
Rnf111-204ENSMUST00000213647 ClspnQ80YR7 1315 aa29.55■■■□□ 2.32
Rnf111-204ENSMUST00000213647 DiexfQ8BTT6 772 aaKnown RBP29.49■■■□□ 2.31
Rnf111-204ENSMUST00000213647 NrdcQ8BHG1 1161 aa29.49■■■□□ 2.31
Rnf111-204ENSMUST00000213647 Anks4bQ8K3X6 423 aa29.49■■■□□ 2.31
Rnf111-204ENSMUST00000213647 Ttbk1Q6PCN3 1308 aa29.49■■■□□ 2.31
Rnf111-204ENSMUST00000213647 NclP09405 707 aaKnown RBP29.47■■■□□ 2.31
Rnf111-204ENSMUST00000213647 Zcchc6Q5BLK4 1491 aaKnown RBP29.46■■■□□ 2.31
Rnf111-204ENSMUST00000213647 Ppargc1bQ8VHJ7 1014 aa29.43■■■□□ 2.3
Rnf111-204ENSMUST00000213647 4933416C03RikQ3V063 378 aa29.41■■■□□ 2.3
Rnf111-204ENSMUST00000213647 Aplp2Q06335 707 aa29.3■■■□□ 2.28
Rnf111-204ENSMUST00000213647 Anp32aO35381 247 aa29.29■■■□□ 2.28
Rnf111-204ENSMUST00000213647 Anp32bQ9EST5 272 aaKnown RBP29.26■■■□□ 2.27
Rnf111-204ENSMUST00000213647 NeflP08551 543 aa29.24■■■□□ 2.27
Rnf111-204ENSMUST00000213647 Fam50aQ9WV03 339 aaKnown RBP29.23■■■□□ 2.27
Rnf111-204ENSMUST00000213647 Sall2Q9QX96 1004 aa29.2■■■□□ 2.27
Rnf111-204ENSMUST00000213647 Abcc8B2RUS7 1588 aa29.18■■■□□ 2.26
Rnf111-204ENSMUST00000213647 Eif5bQ05D44 1216 aaKnown RBP29.17■■■□□ 2.26
Rnf111-204ENSMUST00000213647 Csrnp3P59055 597 aa29.13■■■□□ 2.25
Rnf111-204ENSMUST00000213647 Cep164Q5DU05 1446 aa29.06■■■□□ 2.24
Rnf111-204ENSMUST00000213647 4930567H17RikQ3V0K5 233 aa29■■■□□ 2.23
Rnf111-204ENSMUST00000213647 Ap3b1Q9Z1T1 1105 aa28.99■■■□□ 2.23
Rnf111-204ENSMUST00000213647 Il27Q8K3I6 234 aa28.99■■■□□ 2.23
Rnf111-204ENSMUST00000213647 Gm38655A0A286YDK6 273 aa28.7■■■□□ 2.18
Rnf111-204ENSMUST00000213647 Plekhg3Q4VAC9 1341 aa28.67■■■□□ 2.18
Rnf111-204ENSMUST00000213647 1700123L14RikQ3V2K7 440 aa28.63■■■□□ 2.17
Rnf111-204ENSMUST00000213647 DaxxO35613 739 aa28.53■■■□□ 2.16
Rnf111-204ENSMUST00000213647 Brd4Q9ESU6 1400 aaKnown RBP28.5■■■□□ 2.15
Rnf111-204ENSMUST00000213647 Calr4Q3TQS0 420 aa28.46■■■□□ 2.15
Rnf111-204ENSMUST00000213647 Chic1Q8CBW7 227 aa28.45■■■□□ 2.14
Rnf111-204ENSMUST00000213647 Clip1Q922J3 1391 aa28.41■■■□□ 2.14
Rnf111-204ENSMUST00000213647 Ccer2J3QPU5 274 aa28.38■■■□□ 2.13
Rnf111-204ENSMUST00000213647 Eid3Q3V124 375 aa28.37■■■□□ 2.13
Rnf111-204ENSMUST00000213647 Ccdc9Q8VC31 543 aaKnown RBP28.35■■■□□ 2.13
Rnf111-204ENSMUST00000213647 Mapk8ip2Q9ERE9 830 aa28.31■■■□□ 2.12
Rnf111-204ENSMUST00000213647 Gm35339A0A140LHH9 1649 aa28.28■■■□□ 2.12
Rnf111-204ENSMUST00000213647 Lmod2Q3UHZ5 550 aa28.27■■■□□ 2.12
Rnf111-204ENSMUST00000213647 Ppp4r2Q0VGB7 417 aa28.24■■■□□ 2.11
Rnf111-204ENSMUST00000213647 Os9Q8K2C7 672 aa28.23■■■□□ 2.11
Rnf111-204ENSMUST00000213647 Wdr43Q6ZQL4 677 aaKnown RBP28.22■■■□□ 2.11
Rnf111-204ENSMUST00000213647 Rb1cc1Q9ESK9 1588 aa28.2■■■□□ 2.11
Rnf111-204ENSMUST00000213647 Fam71e1A1L3C1 212 aa28.1■■■□□ 2.09
Rnf111-204ENSMUST00000213647 Aebp2Q9Z248 504 aaKnown RBP28.1■■■□□ 2.09
Rnf111-204ENSMUST00000213647 Upf2A2AT37 1269 aaKnown RBP28.07■■■□□ 2.08
Rnf111-204ENSMUST00000213647 Hsp90aa1P07901 733 aaKnown RBP27.99■■■□□ 2.07
Rnf111-204ENSMUST00000213647 Npm1Q61937 292 aaKnown RBP27.91■■■□□ 2.06
Rnf111-204ENSMUST00000213647 Mrs2Q5NCE8 434 aa27.89■■■□□ 2.06
Rnf111-204ENSMUST00000213647 Bcl11aQ9QYE3 773 aa27.82■■■□□ 2.04
Rnf111-204ENSMUST00000213647 Nlrp6Q91WS2 869 aa27.75■■■□□ 2.03
Rnf111-204ENSMUST00000213647 Ccdc27Q3V036 639 aa27.75■■■□□ 2.03
Rnf111-204ENSMUST00000213647 Hdac5Q9Z2V6 1113 aa27.73■■■□□ 2.03
Rnf111-204ENSMUST00000213647 Golga3P55937 1487 aa27.7■■■□□ 2.03
Rnf111-204ENSMUST00000213647 Baz1aO88379 1555 aa27.69■■■□□ 2.02
Rnf111-204ENSMUST00000213647 BlmO88700 1416 aa27.65■■■□□ 2.02
Rnf111-204ENSMUST00000213647 Hnrnpul2Q00PI9 745 aaKnown RBP27.62■■■□□ 2.01
Rnf111-204ENSMUST00000213647 Zbtb7cQ8VCZ7 619 aa27.58■■■□□ 2.01
Rnf111-204ENSMUST00000213647 Setd5Q5XJV7 1441 aa27.55■■■□□ 2
Rnf111-204ENSMUST00000213647 Zbtb4Q5F293 982 aa27.54■■■□□ 2
Rnf111-204ENSMUST00000213647 ArxO35085 564 aa27.53■■■□□ 2
Rnf111-204ENSMUST00000213647 Rsf1E9PWW9 1441 aaKnown RBP27.5■■□□□ 1.99
Rnf111-204ENSMUST00000213647 CanxP35564 591 aaKnown RBP27.5■■□□□ 1.99
Rnf111-204ENSMUST00000213647 Polr3glQ8R0C0 218 aa27.48■■□□□ 1.99
Rnf111-204ENSMUST00000213647 SafbD3YXK2 937 aaKnown RBP27.46■■□□□ 1.99
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms