RNA–Protein interactions for RNA: ENSMUST00000189527.1

Gm553-201, mousemouse

TSL 1 (best) BASIC

Gene Gm553, Length 701 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm553-201ENSMUST00000189527 Chic1Q8CBW7 227 aa20.62■□□□□ 0.89
Gm553-201ENSMUST00000189527 Mapk8ip2Q9ERE9 830 aa20.4■□□□□ 0.86
Gm553-201ENSMUST00000189527 Gm35339A0A140LHH9 1649 aa18.63■□□□□ 0.57
Gm553-201ENSMUST00000189527 Phf23Q8BSN5 401 aa18.37■□□□□ 0.53
Gm553-201ENSMUST00000189527 NischQ80TM9 1593 aa18.19■□□□□ 0.5
Gm553-201ENSMUST00000189527 Abcc8B2RUS7 1588 aa17.69■□□□□ 0.42
Gm553-201ENSMUST00000189527 Abcc9P70170 1546 aa17.6■□□□□ 0.41
Gm553-201ENSMUST00000189527 Gab3Q8BSM5 595 aa17.55■□□□□ 0.4
Gm553-201ENSMUST00000189527 Plppr3Q7TPB0 716 aa17.5■□□□□ 0.39
Gm553-201ENSMUST00000189527 ScribQ80U72 1612 aa17.36■□□□□ 0.37
Gm553-201ENSMUST00000189527 Senp3Q9EP97 568 aaKnown RBP16.73■□□□□ 0.27
Gm553-201ENSMUST00000189527 Kdm5dQ62240 1548 aa16.61■□□□□ 0.25
Gm553-201ENSMUST00000189527 NacadQ5SWP3 1504 aa16.55■□□□□ 0.24
Gm553-201ENSMUST00000189527 Sycp2Q9CUU3 1500 aa16.29■□□□□ 0.2
Gm553-201ENSMUST00000189527 BicraF8VPZ9 1578 aa16.23■□□□□ 0.19
Gm553-201ENSMUST00000189527 Dnajc5bQ9CQ94 199 aa16.2■□□□□ 0.18
Gm553-201ENSMUST00000189527 Dcaf1Q80TR8 1506 aa16.19■□□□□ 0.18
Gm553-201ENSMUST00000189527 Rb1cc1Q9ESK9 1588 aa15.86■□□□□ 0.13
Gm553-201ENSMUST00000189527 Thoc2B1AZI6 1594 aaKnown RBP15.75■□□□□ 0.11
Gm553-201ENSMUST00000189527 Kcna4Q61423 654 aa15.64■□□□□ 0.09
Gm553-201ENSMUST00000189527 Pds5bQ4VA53 1446 aaKnown RBP15.6■□□□□ 0.09
Gm553-201ENSMUST00000189527 Baz1aO88379 1555 aa15.58■□□□□ 0.08
Gm553-201ENSMUST00000189527 Ccdc180J3QNE4 1664 aa15.51■□□□□ 0.07
Gm553-201ENSMUST00000189527 Cc2d2aQ8CFW7 1633 aa15.48■□□□□ 0.07
Gm553-201ENSMUST00000189527 Atad2bE9Q166 1460 aaKnown RBP15.44■□□□□ 0.06
Gm553-201ENSMUST00000189527 Crybg2B7ZCC2 1516 aa15.43■□□□□ 0.06
Gm553-201ENSMUST00000189527 Zcchc6Q5BLK4 1491 aaKnown RBP15.38■□□□□ 0.05
Gm553-201ENSMUST00000189527 Rhox8Q6VSS7 320 aa15.35■□□□□ 0.05
Gm553-201ENSMUST00000189527 Smarca2Q6DIC0 1577 aa15.32■□□□□ 0.04
Gm553-201ENSMUST00000189527 Fam135aQ6NS59 1506 aa15.28■□□□□ 0.04
Gm553-201ENSMUST00000189527 Ercc6F8VPZ5 1481 aa15.28■□□□□ 0.04
Gm553-201ENSMUST00000189527 Smarca4Q3TKT4 1613 aaKnown RBP15.28■□□□□ 0.04
Gm553-201ENSMUST00000189527 Fam163aQ8CAA5 168 aa15.27■□□□□ 0.04
Gm553-201ENSMUST00000189527 Iqgap2Q3UQ44 1575 aa15.25■□□□□ 0.03
Gm553-201ENSMUST00000189527 Cecr2E9Q2Z1 1453 aa15.25■□□□□ 0.03
Gm553-201ENSMUST00000189527 Wdr62Q3U3T8 1523 aa15.16■□□□□ 0.02
Gm553-201ENSMUST00000189527 Unc13aQ4KUS2 1712 aa15.15■□□□□ 0.02
Gm553-201ENSMUST00000189527 Frmpd1A2AKB4 1549 aa15.15■□□□□ 0.02
Gm553-201ENSMUST00000189527 Phldb1Q6PDH0 1371 aaKnown RBP14.99□□□□□ -0.01
Gm553-201ENSMUST00000189527 Hoxd11P23813 323 aa14.92□□□□□ -0.02
Gm553-201ENSMUST00000189527 Ubl4bQ9CQ84 188 aa14.87□□□□□ -0.03
Gm553-201ENSMUST00000189527 Mrc2Q64449 1479 aa14.87□□□□□ -0.03
Gm553-201ENSMUST00000189527 Baz1bQ9Z277 1479 aa14.84□□□□□ -0.03
Gm553-201ENSMUST00000189527 Trap1aP19473 224 aa14.83□□□□□ -0.04
Gm553-201ENSMUST00000189527 Synj1Q8CHC4 1574 aa14.78□□□□□ -0.04
Gm553-201ENSMUST00000189527 Cttnbp2B9EJA2 1648 aa14.77□□□□□ -0.04
Gm553-201ENSMUST00000189527 CftrP26361 1476 aa14.76□□□□□ -0.05
Gm553-201ENSMUST00000189527 Dnajc5P60904 198 aa14.73□□□□□ -0.05
Gm553-201ENSMUST00000189527 Trim41Q5NCC3 630 aa14.72□□□□□ -0.05
Gm553-201ENSMUST00000189527 Rtl1Q7M732 1744 aa14.72□□□□□ -0.05
Gm553-201ENSMUST00000189527 Lrriq1Q0P5X1 1673 aa14.7□□□□□ -0.06
Gm553-201ENSMUST00000189527 Kif21aQ9QXL2 1672 aa14.61□□□□□ -0.07
Gm553-201ENSMUST00000189527 Brd4Q9ESU6 1400 aaKnown RBP14.52□□□□□ -0.08
Gm553-201ENSMUST00000189527 Cux2P70298 1426 aa14.51□□□□□ -0.09
Gm553-201ENSMUST00000189527 Ccdc136Q3TVA9 1136 aa14.47□□□□□ -0.09
Gm553-201ENSMUST00000189527 Rsf1E9PWW9 1441 aaKnown RBP14.46□□□□□ -0.09
Gm553-201ENSMUST00000189527 Kif15Q6P9L6 1387 aa14.45□□□□□ -0.1
Gm553-201ENSMUST00000189527 Znf219Q6IQX8 726 aa14.44□□□□□ -0.1
Gm553-201ENSMUST00000189527 Eif4g3Q80XI3 1579 aaKnown RBP14.42□□□□□ -0.1
Gm553-201ENSMUST00000189527 Lamc3Q9R0B6 1581 aa14.4□□□□□ -0.1
Gm553-201ENSMUST00000189527 Esf1Q3V1V3 845 aaKnown RBP14.34□□□□□ -0.11
Gm553-201ENSMUST00000189527 Shroom2A2ALU4 1481 aa14.31□□□□□ -0.12
Gm553-201ENSMUST00000189527 Urb2E9Q7L1 1524 aaKnown RBP14.3□□□□□ -0.12
Gm553-201ENSMUST00000189527 Plb1Q3TTY0 1478 aa14.24□□□□□ -0.13
Gm553-201ENSMUST00000189527 Col17a1Q07563 1470 aa14.23□□□□□ -0.13
Gm553-201ENSMUST00000189527 Npm1Q61937 292 aaKnown RBP14.21□□□□□ -0.13
Gm553-201ENSMUST00000189527 TnnQ80Z71 1560 aa14.2□□□□□ -0.14
Gm553-201ENSMUST00000189527 Cep164Q5DU05 1446 aa14.19□□□□□ -0.14
Gm553-201ENSMUST00000189527 Dhx29Q6PGC1 1365 aaKnown RBP14.19□□□□□ -0.14
Gm553-201ENSMUST00000189527 Setd1bQ8CFT2 1985 aa14.18□□□□□ -0.14
Gm553-201ENSMUST00000189527 Crocc2F6XLV1 1638 aa14.16□□□□□ -0.14
Gm553-201ENSMUST00000189527 Camsap1A2AHC3 1581 aa14.14□□□□□ -0.15
Gm553-201ENSMUST00000189527 Top2bQ64511 1612 aa14.14□□□□□ -0.15
Gm553-201ENSMUST00000189527 Il27Q8K3I6 234 aa14.12□□□□□ -0.15
Gm553-201ENSMUST00000189527 ArsiQ32KI9 573 aa14.1□□□□□ -0.15
Gm553-201ENSMUST00000189527 Chrna2Q91X60 512 aa14.1□□□□□ -0.15
Gm553-201ENSMUST00000189527 Rusc2Q80U22 1514 aa14.1□□□□□ -0.15
Gm553-201ENSMUST00000189527 LrpprcQ6PB66 1392 aaKnown RBP14.08□□□□□ -0.16
Gm553-201ENSMUST00000189527 Ccdc18Q640L5 1455 aa14.06□□□□□ -0.16
Gm553-201ENSMUST00000189527 Pabpn1Q8CCS6 302 aaKnown RBP14.05□□□□□ -0.16
Gm553-201ENSMUST00000189527 PogzQ8BZH4 1409 aaKnown RBP14□□□□□ -0.17
Gm553-201ENSMUST00000189527 Rsph4aQ8BYM7 716 aa14□□□□□ -0.17
Gm553-201ENSMUST00000189527 Ift140E9PY46 1464 aa13.99□□□□□ -0.17
Gm553-201ENSMUST00000189527 Golga3P55937 1487 aa13.99□□□□□ -0.17
Gm553-201ENSMUST00000189527 Pelp1Q9DBD5 1123 aaKnown RBP13.98□□□□□ -0.17
Gm553-201ENSMUST00000189527 Dmrt2Q8BG36 561 aa13.96□□□□□ -0.17
Gm553-201ENSMUST00000189527 Samd9lQ69Z37 1561 aa13.96□□□□□ -0.18
Gm553-201ENSMUST00000189527 Duox2A2AQ99 1517 aa13.95□□□□□ -0.18
Gm553-201ENSMUST00000189527 Disp1Q3TDN0 1521 aa13.95□□□□□ -0.18
Gm553-201ENSMUST00000189527 Zcchc11B2RX14 1644 aaKnown RBP13.94□□□□□ -0.18
Gm553-201ENSMUST00000189527 Cngb1E1AZ71 1325 aa13.92□□□□□ -0.18
Gm553-201ENSMUST00000189527 Grin2bQ01097 1482 aa13.87□□□□□ -0.19
Gm553-201ENSMUST00000189527 Pcdh10E9PXQ7 1057 aa13.87□□□□□ -0.19
Gm553-201ENSMUST00000189527 Nup160Q9Z0W3 1402 aaKnown RBP13.87□□□□□ -0.19
Gm553-201ENSMUST00000189527 Fmn1Q05860 1466 aa13.87□□□□□ -0.19
Gm553-201ENSMUST00000189527 Pbrm1Q8BSQ9 1634 aaKnown RBP13.86□□□□□ -0.19
Gm553-201ENSMUST00000189527 Rad54l2Q99NG0 1466 aa13.82□□□□□ -0.2
Gm553-201ENSMUST00000189527 Adgrl3Q80TS3 1537 aa13.8□□□□□ -0.2
Gm553-201ENSMUST00000189527 Cep170Q6A065 1588 aa13.79□□□□□ -0.2
Gm553-201ENSMUST00000189527 Rimbp2Q80U40 1072 aa13.79□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 8.3 ms