RNA–Protein interactions for RNA: ENSMUST00000188063.1

Gm28999-201, mousemouse

TSL 5 BASIC

Gene Gm28999, Length 1,498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28999-201ENSMUST00000188063 Chic1Q8CBW7 227 aa22.73■■□□□ 1.23
Gm28999-201ENSMUST00000188063 Mapk8ip2Q9ERE9 830 aa22.56■■□□□ 1.2
Gm28999-201ENSMUST00000188063 Phf23Q8BSN5 401 aa20.37■□□□□ 0.85
Gm28999-201ENSMUST00000188063 Gab3Q8BSM5 595 aa19.42■□□□□ 0.7
Gm28999-201ENSMUST00000188063 Plppr3Q7TPB0 716 aa19.36■□□□□ 0.69
Gm28999-201ENSMUST00000188063 Senp3Q9EP97 568 aaKnown RBP18.55■□□□□ 0.56
Gm28999-201ENSMUST00000188063 Kcna4Q61423 654 aa17.37■□□□□ 0.37
Gm28999-201ENSMUST00000188063 Fam163aQ8CAA5 168 aa17.11■□□□□ 0.33
Gm28999-201ENSMUST00000188063 Hoxd11P23813 323 aa16.47■□□□□ 0.23
Gm28999-201ENSMUST00000188063 Trap1aP19473 224 aa16.4■□□□□ 0.22
Gm28999-201ENSMUST00000188063 GapdhsQ64467 440 aa15.91■□□□□ 0.14
Gm28999-201ENSMUST00000188063 Znf219Q6IQX8 726 aa15.91■□□□□ 0.14
Gm28999-201ENSMUST00000188063 Chrna2Q91X60 512 aa15.58■□□□□ 0.08
Gm28999-201ENSMUST00000188063 ArsiQ32KI9 573 aa15.56■□□□□ 0.08
Gm28999-201ENSMUST00000188063 Dmrt2Q8BG36 561 aa15.49■□□□□ 0.07
Gm28999-201ENSMUST00000188063 Rsph4aQ8BYM7 716 aa15.49■□□□□ 0.07
Gm28999-201ENSMUST00000188063 Rimbp2Q80U40 1072 aa15.27■□□□□ 0.04
Gm28999-201ENSMUST00000188063 Slc34a2Q9DBP0 697 aa15.17■□□□□ 0.02
Gm28999-201ENSMUST00000188063 Dnajc5bQ9CQ94 199 aa15.15■□□□□ 0.02
Gm28999-201ENSMUST00000188063 Akt1s1Q9D1F4 257 aa15.08■□□□□ 0.01
Gm28999-201ENSMUST00000188063 Ppargc1bQ8VHJ7 1014 aa14.91□□□□□ -0.02
Gm28999-201ENSMUST00000188063 Atf5O70191 283 aa14.85□□□□□ -0.03
Gm28999-201ENSMUST00000188063 Ppp4r2Q0VGB7 417 aa14.75□□□□□ -0.05
Gm28999-201ENSMUST00000188063 Hs6st3Q9QYK4 470 aa14.72□□□□□ -0.05
Gm28999-201ENSMUST00000188063 Slc4a1apE9PX68 744 aa14.68□□□□□ -0.06
Gm28999-201ENSMUST00000188063 Bach1P97302 739 aa14.34□□□□□ -0.11
Gm28999-201ENSMUST00000188063 Sox12Q04890 314 aa14.3□□□□□ -0.12
Gm28999-201ENSMUST00000188063 1700123L14RikQ3V2K7 440 aa14.21□□□□□ -0.13
Gm28999-201ENSMUST00000188063 WdpcpQ8C456 722 aa13.94□□□□□ -0.18
Gm28999-201ENSMUST00000188063 Znf704Q9ERQ3 566 aa13.93□□□□□ -0.18
Gm28999-201ENSMUST00000188063 Slc4a5E9Q3M5 1116 aa13.88□□□□□ -0.19
Gm28999-201ENSMUST00000188063 Egfem1Q8C088 590 aa13.67□□□□□ -0.22
Gm28999-201ENSMUST00000188063 Grwd1Q810D6 446 aaKnown RBP13.64□□□□□ -0.23
Gm28999-201ENSMUST00000188063 Ifnlr1Q8CGK5 535 aa13.62□□□□□ -0.23
Gm28999-201ENSMUST00000188063 Zbtb7aO88939 569 aaKnown RBP13.61□□□□□ -0.23
Gm28999-201ENSMUST00000188063 G430095P16RikE9Q913 147 aa13.54□□□□□ -0.24
Gm28999-201ENSMUST00000188063 Cacnb1Q8R3Z5 597 aa13.54□□□□□ -0.24
Gm28999-201ENSMUST00000188063 C1qtnf12Q8R2Z0 308 aa13.49□□□□□ -0.25
Gm28999-201ENSMUST00000188063 Abcb7Q61102 752 aaKnown RBP13.35□□□□□ -0.27
Gm28999-201ENSMUST00000188063 Cdca7Q9D0M2 382 aa13.33□□□□□ -0.28
Gm28999-201ENSMUST00000188063 Rnf216P58283 853 aa13.32□□□□□ -0.28
Gm28999-201ENSMUST00000188063 Zbtb12Q9Z150 459 aa13.27□□□□□ -0.29
Gm28999-201ENSMUST00000188063 Nlrp6Q91WS2 869 aa13.21□□□□□ -0.3
Gm28999-201ENSMUST00000188063 Gtpbp6Q3U6U5 514 aa13.17□□□□□ -0.3
Gm28999-201ENSMUST00000188063 Ms4a5Q810P8 197 aa13.16□□□□□ -0.3
Gm28999-201ENSMUST00000188063 Nkx1-1G3UXB3 402 aa13.13□□□□□ -0.31
Gm28999-201ENSMUST00000188063 Fam71e1A1L3C1 212 aa13.1□□□□□ -0.31
Gm28999-201ENSMUST00000188063 Riok3Q9DBU3 519 aaKnown RBP13.1□□□□□ -0.31
Gm28999-201ENSMUST00000188063 Znf703P0CL69 594 aa13.07□□□□□ -0.32
Gm28999-201ENSMUST00000188063 Trim41Q5NCC3 630 aa13.06□□□□□ -0.32
Gm28999-201ENSMUST00000188063 Ildr2B5TVM2 661 aa13.01□□□□□ -0.33
Gm28999-201ENSMUST00000188063 Npm2Q80W85 207 aa12.99□□□□□ -0.33
Gm28999-201ENSMUST00000188063 Kcnn1Q9EQR3 537 aa12.95□□□□□ -0.34
Gm28999-201ENSMUST00000188063 MyclP10166 368 aa12.94□□□□□ -0.34
Gm28999-201ENSMUST00000188063 Prr29B1ARI9 187 aa12.92□□□□□ -0.34
Gm28999-201ENSMUST00000188063 AcrbpQ3V140 540 aa12.83□□□□□ -0.36
Gm28999-201ENSMUST00000188063 Pde4cQ3UEI1 686 aa12.78□□□□□ -0.36
Gm28999-201ENSMUST00000188063 Fbln2P37889 1221 aa12.76□□□□□ -0.37
Gm28999-201ENSMUST00000188063 Prm3Q62100 101 aa12.7□□□□□ -0.38
Gm28999-201ENSMUST00000188063 Npm3Q9CPP0 175 aaKnown RBP12.61□□□□□ -0.39
Gm28999-201ENSMUST00000188063 Pitpnm1O35954 1243 aa12.6□□□□□ -0.39
Gm28999-201ENSMUST00000188063 Pip4p2Q9CZX7 257 aa12.6□□□□□ -0.39
Gm28999-201ENSMUST00000188063 Clcn6O35454 870 aa12.59□□□□□ -0.39
Gm28999-201ENSMUST00000188063 Styxl1Q9DAR2 321 aa12.57□□□□□ -0.4
Gm28999-201ENSMUST00000188063 Kank3Q9Z1P7 791 aa12.57□□□□□ -0.4
Gm28999-201ENSMUST00000188063 MpndQ3TV65 487 aa12.54□□□□□ -0.4
Gm28999-201ENSMUST00000188063 Skida1Q80YR3 822 aa12.52□□□□□ -0.41
Gm28999-201ENSMUST00000188063 Trim35Q8C006 501 aa12.51□□□□□ -0.41
Gm28999-201ENSMUST00000188063 Rtn4Q99P72 1162 aaKnown RBP12.43□□□□□ -0.42
Gm28999-201ENSMUST00000188063 Tshz2Q68FE9 1030 aa12.36□□□□□ -0.43
Gm28999-201ENSMUST00000188063 Ube2uB1AUC4 352 aa12.29□□□□□ -0.44
Gm28999-201ENSMUST00000188063 Cadps2Q8BYR5 1297 aa12.2□□□□□ -0.46
Gm28999-201ENSMUST00000188063 Nyap1Q6PFX7 833 aa12.15□□□□□ -0.46
Gm28999-201ENSMUST00000188063 Lrrc43Q3V0L5 667 aa12.11□□□□□ -0.47
Gm28999-201ENSMUST00000188063 Ppp1r37Q8BKR5 712 aa12.1□□□□□ -0.47
Gm28999-201ENSMUST00000188063 Jarid2Q62315 1234 aa12.09□□□□□ -0.47
Gm28999-201ENSMUST00000188063 Gm35339A0A140LHH9 1649 aa12.08□□□□□ -0.48
Gm28999-201ENSMUST00000188063 Tcf3P15806 651 aa12.06□□□□□ -0.48
Gm28999-201ENSMUST00000188063 NischQ80TM9 1593 aa12.06□□□□□ -0.48
Gm28999-201ENSMUST00000188063 Dok7Q18PE0 504 aa12.02□□□□□ -0.49
Gm28999-201ENSMUST00000188063 SnphQ80U23 495 aa12□□□□□ -0.49
Gm28999-201ENSMUST00000188063 Foxp4Q9DBY0 795 aaKnown RBP11.97□□□□□ -0.49
Gm28999-201ENSMUST00000188063 Hnrnpul2Q00PI9 745 aaKnown RBP11.88□□□□□ -0.51
Gm28999-201ENSMUST00000188063 Evx2P49749 475 aa11.87□□□□□ -0.51
Gm28999-201ENSMUST00000188063 ArntlQ9WTL8 632 aa11.86□□□□□ -0.51
Gm28999-201ENSMUST00000188063 Sra1Q80VJ2 232 aa11.81□□□□□ -0.52
Gm28999-201ENSMUST00000188063 Abcc9P70170 1546 aa11.67□□□□□ -0.54
Gm28999-201ENSMUST00000188063 Gjc2Q8BQU6 440 aa11.64□□□□□ -0.55
Gm28999-201ENSMUST00000188063 Zranb1Q7M760 708 aa11.63□□□□□ -0.55
Gm28999-201ENSMUST00000188063 MycnP03966 462 aaKnown RBP11.61□□□□□ -0.55
Gm28999-201ENSMUST00000188063 Map3k10Q66L42 940 aa11.6□□□□□ -0.55
Gm28999-201ENSMUST00000188063 Hdac5Q9Z2V6 1113 aa11.59□□□□□ -0.55
Gm28999-201ENSMUST00000188063 Abcc8B2RUS7 1588 aa11.58□□□□□ -0.56
Gm28999-201ENSMUST00000188063 PygbQ8CI94 843 aaKnown RBP11.57□□□□□ -0.56
Gm28999-201ENSMUST00000188063 CrebzfQ91ZR3 358 aa11.56□□□□□ -0.56
Gm28999-201ENSMUST00000188063 Pde4dQ01063 747 aa11.55□□□□□ -0.56
Gm28999-201ENSMUST00000188063 Znf710Q3U288 666 aa11.51□□□□□ -0.57
Gm28999-201ENSMUST00000188063 Zbtb7bQ64321 544 aa11.51□□□□□ -0.57
Gm28999-201ENSMUST00000188063 Repin1Q5U4E2 545 aa11.5□□□□□ -0.57
Gm28999-201ENSMUST00000188063 Ecm2Q5FW85 670 aa11.49□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms