RNA–Protein interactions for RNA: ENSMUST00000187713.6

Clasp1-208, Transcript of CLIP-associating protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Clasp1, Length 5,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clasp1-208ENSMUST00000187713 Rhox8Q6VSS7 320 aa17.5■□□□□ 0.39
Clasp1-208ENSMUST00000187713 Rpgrip1Q9EPQ2 1331 aa16.67■□□□□ 0.26
Clasp1-208ENSMUST00000187713 Las1lA2BE28 776 aaKnown RBP16.07■□□□□ 0.16
Clasp1-208ENSMUST00000187713 Cngb1E1AZ71 1325 aa16.06■□□□□ 0.16
Clasp1-208ENSMUST00000187713 Ehmt2Q9Z148 1263 aaKnown RBP15.86■□□□□ 0.13
Clasp1-208ENSMUST00000187713 Pelp1Q9DBD5 1123 aaKnown RBP15.72■□□□□ 0.11
Clasp1-208ENSMUST00000187713 Wdr66E9Q743 1299 aa15.63■□□□□ 0.09
Clasp1-208ENSMUST00000187713 Zeb1Q64318 1117 aa15.44■□□□□ 0.06
Clasp1-208ENSMUST00000187713 Ccdc136Q3TVA9 1136 aa15.42■□□□□ 0.06
Clasp1-208ENSMUST00000187713 Esf1Q3V1V3 845 aaKnown RBP15.33■□□□□ 0.04
Clasp1-208ENSMUST00000187713 Ube2uB1AUC4 352 aa15.26■□□□□ 0.03
Clasp1-208ENSMUST00000187713 CenpbP27790 599 aa15.26■□□□□ 0.03
Clasp1-208ENSMUST00000187713 Trim41Q5NCC3 630 aa15.25■□□□□ 0.03
Clasp1-208ENSMUST00000187713 Acin1Q9JIX8 1338 aaKnown RBP15.22■□□□□ 0.03
Clasp1-208ENSMUST00000187713 Gab3Q8BSM5 595 aa15.22■□□□□ 0.03
Clasp1-208ENSMUST00000187713 NefmP08553 848 aa15.11■□□□□ 0.01
Clasp1-208ENSMUST00000187713 Npm2Q80W85 207 aa15.11■□□□□ 0.01
Clasp1-208ENSMUST00000187713 Stra8P70278 393 aa15.02■□□□□ -0
Clasp1-208ENSMUST00000187713 Amer1Q7TS75 1132 aa15.01□□□□□ -0.01
Clasp1-208ENSMUST00000187713 Myt1lP97500 1187 aa14.97□□□□□ -0.01
Clasp1-208ENSMUST00000187713 NischQ80TM9 1593 aa14.96□□□□□ -0.01
Clasp1-208ENSMUST00000187713 Myt1Q8CFC2 1127 aa14.88□□□□□ -0.03
Clasp1-208ENSMUST00000187713 Ccdc180J3QNE4 1664 aa14.81□□□□□ -0.04
Clasp1-208ENSMUST00000187713 UbtfP25976 765 aaKnown RBP14.79□□□□□ -0.04
Clasp1-208ENSMUST00000187713 Cdk11bP24788 784 aaKnown RBP14.76□□□□□ -0.05
Clasp1-208ENSMUST00000187713 HrcG5E8J6 738 aa14.73□□□□□ -0.05
Clasp1-208ENSMUST00000187713 Pcgf6Q99NA9 353 aa14.7□□□□□ -0.06
Clasp1-208ENSMUST00000187713 Slc24a1Q91WD8 1130 aa14.67□□□□□ -0.06
Clasp1-208ENSMUST00000187713 Tnnt3Q9QZ47 272 aa14.66□□□□□ -0.06
Clasp1-208ENSMUST00000187713 Rtl1Q7M732 1744 aa14.62□□□□□ -0.07
Clasp1-208ENSMUST00000187713 4930567H17RikQ3V0K5 233 aa14.56□□□□□ -0.08
Clasp1-208ENSMUST00000187713 Nop58Q6DFW4 536 aaKnown RBP14.54□□□□□ -0.08
Clasp1-208ENSMUST00000187713 4933416C03RikQ3V063 378 aa14.49□□□□□ -0.09
Clasp1-208ENSMUST00000187713 NrdcQ8BHG1 1161 aa14.48□□□□□ -0.09
Clasp1-208ENSMUST00000187713 Ttbk1Q6PCN3 1308 aa14.48□□□□□ -0.09
Clasp1-208ENSMUST00000187713 Anp32bQ9EST5 272 aaKnown RBP14.46□□□□□ -0.09
Clasp1-208ENSMUST00000187713 Rtl5Q5DTT4 599 aa14.42□□□□□ -0.1
Clasp1-208ENSMUST00000187713 NeflP08551 543 aa14.41□□□□□ -0.1
Clasp1-208ENSMUST00000187713 NclP09405 707 aaKnown RBP14.36□□□□□ -0.11
Clasp1-208ENSMUST00000187713 Supt5hO55201 1082 aaKnown RBP14.36□□□□□ -0.11
Clasp1-208ENSMUST00000187713 TonslQ6NZL6 1363 aa14.3□□□□□ -0.12
Clasp1-208ENSMUST00000187713 Fam50aQ9WV03 339 aaKnown RBP14.29□□□□□ -0.12
Clasp1-208ENSMUST00000187713 Eif5bQ05D44 1216 aaKnown RBP14.28□□□□□ -0.12
Clasp1-208ENSMUST00000187713 Il27Q8K3I6 234 aa14.24□□□□□ -0.13
Clasp1-208ENSMUST00000187713 Neurod1Q60867 357 aa14.22□□□□□ -0.13
Clasp1-208ENSMUST00000187713 Ppargc1bQ8VHJ7 1014 aa14.17□□□□□ -0.14
Clasp1-208ENSMUST00000187713 Ap3b1Q9Z1T1 1105 aa14.17□□□□□ -0.14
Clasp1-208ENSMUST00000187713 Mier1Q5UAK0 511 aa14.14□□□□□ -0.15
Clasp1-208ENSMUST00000187713 Zcchc6Q5BLK4 1491 aaKnown RBP14.12□□□□□ -0.15
Clasp1-208ENSMUST00000187713 Anp32aO35381 247 aa14.11□□□□□ -0.15
Clasp1-208ENSMUST00000187713 ClspnQ80YR7 1315 aa14.1□□□□□ -0.15
Clasp1-208ENSMUST00000187713 Os9Q8K2C7 672 aa14.09□□□□□ -0.15
Clasp1-208ENSMUST00000187713 DiexfQ8BTT6 772 aaKnown RBP14.08□□□□□ -0.15
Clasp1-208ENSMUST00000187713 DaxxO35613 739 aa13.93□□□□□ -0.18
Clasp1-208ENSMUST00000187713 Anks4bQ8K3X6 423 aa13.9□□□□□ -0.18
Clasp1-208ENSMUST00000187713 Abcc9P70170 1546 aa13.87□□□□□ -0.19
Clasp1-208ENSMUST00000187713 Aplp2Q06335 707 aa13.84□□□□□ -0.19
Clasp1-208ENSMUST00000187713 Plekhg3Q4VAC9 1341 aa13.8□□□□□ -0.2
Clasp1-208ENSMUST00000187713 Dcaf1Q80TR8 1506 aa13.79□□□□□ -0.2
Clasp1-208ENSMUST00000187713 Sall2Q9QX96 1004 aa13.77□□□□□ -0.21
Clasp1-208ENSMUST00000187713 Lmod2Q3UHZ5 550 aa13.76□□□□□ -0.21
Clasp1-208ENSMUST00000187713 Csrnp3P59055 597 aa13.76□□□□□ -0.21
Clasp1-208ENSMUST00000187713 Nlrp6Q91WS2 869 aa13.71□□□□□ -0.22
Clasp1-208ENSMUST00000187713 Gm38655A0A286YDK6 273 aa13.68□□□□□ -0.22
Clasp1-208ENSMUST00000187713 Ccer2J3QPU5 274 aa13.67□□□□□ -0.22
Clasp1-208ENSMUST00000187713 Npm1Q61937 292 aaKnown RBP13.67□□□□□ -0.22
Clasp1-208ENSMUST00000187713 Hdac5Q9Z2V6 1113 aa13.67□□□□□ -0.22
Clasp1-208ENSMUST00000187713 Calr4Q3TQS0 420 aa13.66□□□□□ -0.22
Clasp1-208ENSMUST00000187713 Cep164Q5DU05 1446 aa13.65□□□□□ -0.22
Clasp1-208ENSMUST00000187713 Hnrnpul2Q00PI9 745 aaKnown RBP13.65□□□□□ -0.22
Clasp1-208ENSMUST00000187713 Zbtb7cQ8VCZ7 619 aa13.65□□□□□ -0.22
Clasp1-208ENSMUST00000187713 Upf2A2AT37 1269 aaKnown RBP13.64□□□□□ -0.23
Clasp1-208ENSMUST00000187713 Mapk8ip2Q9ERE9 830 aa13.64□□□□□ -0.23
Clasp1-208ENSMUST00000187713 Ccdc9Q8VC31 543 aaKnown RBP13.63□□□□□ -0.23
Clasp1-208ENSMUST00000187713 Gm35339A0A140LHH9 1649 aa13.62□□□□□ -0.23
Clasp1-208ENSMUST00000187713 Eid3Q3V124 375 aa13.62□□□□□ -0.23
Clasp1-208ENSMUST00000187713 Clip1Q922J3 1391 aa13.62□□□□□ -0.23
Clasp1-208ENSMUST00000187713 Ppp4r2Q0VGB7 417 aa13.6□□□□□ -0.23
Clasp1-208ENSMUST00000187713 Polr3glQ8R0C0 218 aa13.58□□□□□ -0.24
Clasp1-208ENSMUST00000187713 Zbtb4Q5F293 982 aa13.55□□□□□ -0.24
Clasp1-208ENSMUST00000187713 Wdr43Q6ZQL4 677 aaKnown RBP13.55□□□□□ -0.24
Clasp1-208ENSMUST00000187713 Brd4Q9ESU6 1400 aaKnown RBP13.55□□□□□ -0.24
Clasp1-208ENSMUST00000187713 ArxO35085 564 aa13.54□□□□□ -0.24
Clasp1-208ENSMUST00000187713 Erich6D3Z6S9 713 aa13.51□□□□□ -0.25
Clasp1-208ENSMUST00000187713 Hsp90aa1P07901 733 aaKnown RBP13.51□□□□□ -0.25
Clasp1-208ENSMUST00000187713 Gm13697A2AK42 830 aa13.51□□□□□ -0.25
Clasp1-208ENSMUST00000187713 Chic1Q8CBW7 227 aa13.48□□□□□ -0.25
Clasp1-208ENSMUST00000187713 Abcc8B2RUS7 1588 aa13.47□□□□□ -0.25
Clasp1-208ENSMUST00000187713 Atp1b4Q99ME6 356 aa13.45□□□□□ -0.26
Clasp1-208ENSMUST00000187713 Mrs2Q5NCE8 434 aa13.44□□□□□ -0.26
Clasp1-208ENSMUST00000187713 Prdm10Q3UTQ7 1184 aa13.43□□□□□ -0.26
Clasp1-208ENSMUST00000187713 CatipB9EKE5 520 aa13.41□□□□□ -0.26
Clasp1-208ENSMUST00000187713 Ythdc1E9Q5K9 736 aaKnown RBP13.38□□□□□ -0.27
Clasp1-208ENSMUST00000187713 Rad21Q61550 635 aaKnown RBP13.37□□□□□ -0.27
Clasp1-208ENSMUST00000187713 1700123L14RikQ3V2K7 440 aa13.36□□□□□ -0.27
Clasp1-208ENSMUST00000187713 Trim44Q9QXA7 346 aa13.34□□□□□ -0.27
Clasp1-208ENSMUST00000187713 DekQ7TNV0 380 aaKnown RBP13.32□□□□□ -0.28
Clasp1-208ENSMUST00000187713 CanxP35564 591 aaKnown RBP13.31□□□□□ -0.28
Clasp1-208ENSMUST00000187713 Gm13695A2AK44 830 aa13.31□□□□□ -0.28
Clasp1-208ENSMUST00000187713 Ifnlr1Q8CGK5 535 aa13.31□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms