RNA–Protein interactions for RNA: ENSMUST00000187402.6

Gm28088-202, mousemouse

TSL 5 BASIC

Gene Gm28088, Length 1,493 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28088-202ENSMUST00000187402 Mapk8ip2Q9ERE9 830 aa23.82■■□□□ 1.4
Gm28088-202ENSMUST00000187402 Chic1Q8CBW7 227 aa23.05■■□□□ 1.28
Gm28088-202ENSMUST00000187402 Phf23Q8BSN5 401 aa20.76■□□□□ 0.91
Gm28088-202ENSMUST00000187402 Gab3Q8BSM5 595 aa19.38■□□□□ 0.69
Gm28088-202ENSMUST00000187402 Plppr3Q7TPB0 716 aa18.97■□□□□ 0.63
Gm28088-202ENSMUST00000187402 Senp3Q9EP97 568 aaKnown RBP18.55■□□□□ 0.56
Gm28088-202ENSMUST00000187402 Fam163aQ8CAA5 168 aa18.1■□□□□ 0.49
Gm28088-202ENSMUST00000187402 Kcna4Q61423 654 aa16.98■□□□□ 0.31
Gm28088-202ENSMUST00000187402 Hoxd11P23813 323 aa16.69■□□□□ 0.26
Gm28088-202ENSMUST00000187402 ArsiQ32KI9 573 aa16.35■□□□□ 0.21
Gm28088-202ENSMUST00000187402 Trap1aP19473 224 aa16.22■□□□□ 0.19
Gm28088-202ENSMUST00000187402 Znf219Q6IQX8 726 aa16.19■□□□□ 0.18
Gm28088-202ENSMUST00000187402 GapdhsQ64467 440 aa16.17■□□□□ 0.18
Gm28088-202ENSMUST00000187402 Slc34a2Q9DBP0 697 aa15.78■□□□□ 0.12
Gm28088-202ENSMUST00000187402 Chrna2Q91X60 512 aa15.53■□□□□ 0.08
Gm28088-202ENSMUST00000187402 Rsph4aQ8BYM7 716 aa15.48■□□□□ 0.07
Gm28088-202ENSMUST00000187402 Rimbp2Q80U40 1072 aa15.44■□□□□ 0.06
Gm28088-202ENSMUST00000187402 Dnajc5bQ9CQ94 199 aa15.42■□□□□ 0.06
Gm28088-202ENSMUST00000187402 Akt1s1Q9D1F4 257 aa15.4■□□□□ 0.06
Gm28088-202ENSMUST00000187402 Dmrt2Q8BG36 561 aa15.17■□□□□ 0.02
Gm28088-202ENSMUST00000187402 Ppargc1bQ8VHJ7 1014 aa14.86□□□□□ -0.03
Gm28088-202ENSMUST00000187402 Slc4a1apE9PX68 744 aa14.67□□□□□ -0.06
Gm28088-202ENSMUST00000187402 Znf704Q9ERQ3 566 aa14.66□□□□□ -0.06
Gm28088-202ENSMUST00000187402 Slc4a5E9Q3M5 1116 aa14.6□□□□□ -0.07
Gm28088-202ENSMUST00000187402 Atf5O70191 283 aa14.56□□□□□ -0.08
Gm28088-202ENSMUST00000187402 Ppp4r2Q0VGB7 417 aa14.36□□□□□ -0.11
Gm28088-202ENSMUST00000187402 Hs6st3Q9QYK4 470 aa14.35□□□□□ -0.11
Gm28088-202ENSMUST00000187402 Bach1P97302 739 aa14.24□□□□□ -0.13
Gm28088-202ENSMUST00000187402 Sox12Q04890 314 aa14.12□□□□□ -0.15
Gm28088-202ENSMUST00000187402 Cacnb1Q8R3Z5 597 aa14.1□□□□□ -0.15
Gm28088-202ENSMUST00000187402 1700123L14RikQ3V2K7 440 aa13.97□□□□□ -0.17
Gm28088-202ENSMUST00000187402 Znf703P0CL69 594 aa13.8□□□□□ -0.2
Gm28088-202ENSMUST00000187402 Ildr2B5TVM2 661 aa13.79□□□□□ -0.2
Gm28088-202ENSMUST00000187402 Egfem1Q8C088 590 aa13.77□□□□□ -0.21
Gm28088-202ENSMUST00000187402 Zbtb7aO88939 569 aaKnown RBP13.72□□□□□ -0.21
Gm28088-202ENSMUST00000187402 Grwd1Q810D6 446 aaKnown RBP13.72□□□□□ -0.21
Gm28088-202ENSMUST00000187402 WdpcpQ8C456 722 aa13.59□□□□□ -0.23
Gm28088-202ENSMUST00000187402 Abcb7Q61102 752 aaKnown RBP13.52□□□□□ -0.25
Gm28088-202ENSMUST00000187402 Prr29B1ARI9 187 aa13.48□□□□□ -0.25
Gm28088-202ENSMUST00000187402 Kcnn1Q9EQR3 537 aa13.38□□□□□ -0.27
Gm28088-202ENSMUST00000187402 Fam71e1A1L3C1 212 aa13.35□□□□□ -0.27
Gm28088-202ENSMUST00000187402 G430095P16RikE9Q913 147 aa13.3□□□□□ -0.28
Gm28088-202ENSMUST00000187402 Ifnlr1Q8CGK5 535 aa13.29□□□□□ -0.28
Gm28088-202ENSMUST00000187402 Nlrp6Q91WS2 869 aa13.27□□□□□ -0.29
Gm28088-202ENSMUST00000187402 Cdca7Q9D0M2 382 aa13.27□□□□□ -0.29
Gm28088-202ENSMUST00000187402 Gm35339A0A140LHH9 1649 aa13.24□□□□□ -0.29
Gm28088-202ENSMUST00000187402 C1qtnf12Q8R2Z0 308 aa13.22□□□□□ -0.29
Gm28088-202ENSMUST00000187402 Ube2uB1AUC4 352 aa13.21□□□□□ -0.3
Gm28088-202ENSMUST00000187402 Nkx1-1G3UXB3 402 aa13.15□□□□□ -0.3
Gm28088-202ENSMUST00000187402 Rnf216P58283 853 aa13.15□□□□□ -0.3
Gm28088-202ENSMUST00000187402 NischQ80TM9 1593 aa13.11□□□□□ -0.31
Gm28088-202ENSMUST00000187402 Pip4p2Q9CZX7 257 aa13.11□□□□□ -0.31
Gm28088-202ENSMUST00000187402 AcrbpQ3V140 540 aa13.08□□□□□ -0.32
Gm28088-202ENSMUST00000187402 Npm2Q80W85 207 aa13.03□□□□□ -0.32
Gm28088-202ENSMUST00000187402 Gtpbp6Q3U6U5 514 aa12.99□□□□□ -0.33
Gm28088-202ENSMUST00000187402 Riok3Q9DBU3 519 aaKnown RBP12.97□□□□□ -0.33
Gm28088-202ENSMUST00000187402 Trim41Q5NCC3 630 aa12.94□□□□□ -0.34
Gm28088-202ENSMUST00000187402 Pde4cQ3UEI1 686 aa12.92□□□□□ -0.34
Gm28088-202ENSMUST00000187402 Kank3Q9Z1P7 791 aa12.92□□□□□ -0.34
Gm28088-202ENSMUST00000187402 MyclP10166 368 aa12.91□□□□□ -0.34
Gm28088-202ENSMUST00000187402 Zbtb12Q9Z150 459 aa12.91□□□□□ -0.34
Gm28088-202ENSMUST00000187402 Prm3Q62100 101 aa12.88□□□□□ -0.35
Gm28088-202ENSMUST00000187402 Pitpnm1O35954 1243 aa12.78□□□□□ -0.36
Gm28088-202ENSMUST00000187402 Ms4a5Q810P8 197 aa12.78□□□□□ -0.36
Gm28088-202ENSMUST00000187402 Clcn6O35454 870 aa12.76□□□□□ -0.37
Gm28088-202ENSMUST00000187402 Rtn4Q99P72 1162 aaKnown RBP12.76□□□□□ -0.37
Gm28088-202ENSMUST00000187402 Trim35Q8C006 501 aa12.72□□□□□ -0.37
Gm28088-202ENSMUST00000187402 Abcc9P70170 1546 aa12.69□□□□□ -0.38
Gm28088-202ENSMUST00000187402 Abcc8B2RUS7 1588 aa12.66□□□□□ -0.38
Gm28088-202ENSMUST00000187402 Styxl1Q9DAR2 321 aa12.62□□□□□ -0.39
Gm28088-202ENSMUST00000187402 Tshz2Q68FE9 1030 aa12.53□□□□□ -0.4
Gm28088-202ENSMUST00000187402 Foxp4Q9DBY0 795 aaKnown RBP12.5□□□□□ -0.41
Gm28088-202ENSMUST00000187402 Evx2P49749 475 aa12.44□□□□□ -0.42
Gm28088-202ENSMUST00000187402 ArntlQ9WTL8 632 aa12.44□□□□□ -0.42
Gm28088-202ENSMUST00000187402 Fbln2P37889 1221 aa12.42□□□□□ -0.42
Gm28088-202ENSMUST00000187402 MpndQ3TV65 487 aa12.33□□□□□ -0.44
Gm28088-202ENSMUST00000187402 Npm3Q9CPP0 175 aaKnown RBP12.3□□□□□ -0.44
Gm28088-202ENSMUST00000187402 Skida1Q80YR3 822 aa12.26□□□□□ -0.45
Gm28088-202ENSMUST00000187402 Ehmt2Q9Z148 1263 aaKnown RBP12.15□□□□□ -0.46
Gm28088-202ENSMUST00000187402 ScribQ80U72 1612 aa12.15□□□□□ -0.46
Gm28088-202ENSMUST00000187402 Tcf3P15806 651 aa12.1□□□□□ -0.47
Gm28088-202ENSMUST00000187402 Dok7Q18PE0 504 aa12□□□□□ -0.49
Gm28088-202ENSMUST00000187402 Cadps2Q8BYR5 1297 aa11.96□□□□□ -0.49
Gm28088-202ENSMUST00000187402 Nyap1Q6PFX7 833 aa11.95□□□□□ -0.5
Gm28088-202ENSMUST00000187402 Ppp1r37Q8BKR5 712 aa11.95□□□□□ -0.5
Gm28088-202ENSMUST00000187402 Ecm2Q5FW85 670 aa11.93□□□□□ -0.5
Gm28088-202ENSMUST00000187402 Lrrc43Q3V0L5 667 aa11.89□□□□□ -0.51
Gm28088-202ENSMUST00000187402 Fxr2Q9WVR4 673 aaKnown RBP11.89□□□□□ -0.51
Gm28088-202ENSMUST00000187402 Krtap4-1Q3UUY3 169 aa11.87□□□□□ -0.51
Gm28088-202ENSMUST00000187402 NacadQ5SWP3 1504 aa11.84□□□□□ -0.51
Gm28088-202ENSMUST00000187402 Jarid2Q62315 1234 aa11.81□□□□□ -0.52
Gm28088-202ENSMUST00000187402 SnphQ80U23 495 aa11.8□□□□□ -0.52
Gm28088-202ENSMUST00000187402 Lhx8O35652 367 aa11.79□□□□□ -0.52
Gm28088-202ENSMUST00000187402 Kdm5dQ62240 1548 aa11.79□□□□□ -0.52
Gm28088-202ENSMUST00000187402 Map3k10Q66L42 940 aa11.73□□□□□ -0.53
Gm28088-202ENSMUST00000187402 Hnrnpul2Q00PI9 745 aaKnown RBP11.72□□□□□ -0.53
Gm28088-202ENSMUST00000187402 Dcaf1Q80TR8 1506 aa11.69□□□□□ -0.54
Gm28088-202ENSMUST00000187402 Gjc2Q8BQU6 440 aa11.69□□□□□ -0.54
Gm28088-202ENSMUST00000187402 Kiaa1522A2A7S8 1013 aa11.67□□□□□ -0.54
Gm28088-202ENSMUST00000187402 Zranb1Q7M760 708 aa11.64□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms