RNA–Protein interactions for RNA: ENSMUST00000180938.2

Trav21-dv12-201, Transcript of T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav21-dv12, Length 360 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12-201ENSMUST00000180938 Chic1Q8CBW7 227 aa17.68■□□□□ 0.42
Trav21-dv12-201ENSMUST00000180938 Mapk8ip2Q9ERE9 830 aa17.1■□□□□ 0.33
Trav21-dv12-201ENSMUST00000180938 Gm35339A0A140LHH9 1649 aa16.3■□□□□ 0.2
Trav21-dv12-201ENSMUST00000180938 Phf23Q8BSN5 401 aa16.06■□□□□ 0.16
Trav21-dv12-201ENSMUST00000180938 NischQ80TM9 1593 aa16.02■□□□□ 0.16
Trav21-dv12-201ENSMUST00000180938 Abcc8B2RUS7 1588 aa15.59■□□□□ 0.09
Trav21-dv12-201ENSMUST00000180938 Abcc9P70170 1546 aa15.58■□□□□ 0.08
Trav21-dv12-201ENSMUST00000180938 Plppr3Q7TPB0 716 aa15.55■□□□□ 0.08
Trav21-dv12-201ENSMUST00000180938 Gab3Q8BSM5 595 aa15.33■□□□□ 0.04
Trav21-dv12-201ENSMUST00000180938 ScribQ80U72 1612 aa15.21■□□□□ 0.02
Trav21-dv12-201ENSMUST00000180938 Senp3Q9EP97 568 aaKnown RBP14.76□□□□□ -0.05
Trav21-dv12-201ENSMUST00000180938 NacadQ5SWP3 1504 aa14.66□□□□□ -0.06
Trav21-dv12-201ENSMUST00000180938 Kdm5dQ62240 1548 aa14.63□□□□□ -0.07
Trav21-dv12-201ENSMUST00000180938 Kcna4Q61423 654 aa14.46□□□□□ -0.09
Trav21-dv12-201ENSMUST00000180938 Sycp2Q9CUU3 1500 aa14.41□□□□□ -0.1
Trav21-dv12-201ENSMUST00000180938 Dnajc5bQ9CQ94 199 aa14.39□□□□□ -0.11
Trav21-dv12-201ENSMUST00000180938 BicraF8VPZ9 1578 aa14.27□□□□□ -0.12
Trav21-dv12-201ENSMUST00000180938 Dcaf1Q80TR8 1506 aa14.25□□□□□ -0.13
Trav21-dv12-201ENSMUST00000180938 Rb1cc1Q9ESK9 1588 aa13.93□□□□□ -0.18
Trav21-dv12-201ENSMUST00000180938 Pds5bQ4VA53 1446 aaKnown RBP13.9□□□□□ -0.19
Trav21-dv12-201ENSMUST00000180938 Thoc2B1AZI6 1594 aaKnown RBP13.88□□□□□ -0.19
Trav21-dv12-201ENSMUST00000180938 Atad2bE9Q166 1460 aaKnown RBP13.71□□□□□ -0.21
Trav21-dv12-201ENSMUST00000180938 Baz1aO88379 1555 aa13.71□□□□□ -0.22
Trav21-dv12-201ENSMUST00000180938 Crybg2B7ZCC2 1516 aa13.68□□□□□ -0.22
Trav21-dv12-201ENSMUST00000180938 Cc2d2aQ8CFW7 1633 aa13.65□□□□□ -0.22
Trav21-dv12-201ENSMUST00000180938 Rhox8Q6VSS7 320 aa13.62□□□□□ -0.23
Trav21-dv12-201ENSMUST00000180938 Zcchc6Q5BLK4 1491 aaKnown RBP13.61□□□□□ -0.23
Trav21-dv12-201ENSMUST00000180938 Ercc6F8VPZ5 1481 aa13.58□□□□□ -0.24
Trav21-dv12-201ENSMUST00000180938 Ccdc180J3QNE4 1664 aa13.56□□□□□ -0.24
Trav21-dv12-201ENSMUST00000180938 Smarca2Q6DIC0 1577 aa13.53□□□□□ -0.24
Trav21-dv12-201ENSMUST00000180938 Fam135aQ6NS59 1506 aa13.51□□□□□ -0.25
Trav21-dv12-201ENSMUST00000180938 Smarca4Q3TKT4 1613 aaKnown RBP13.47□□□□□ -0.25
Trav21-dv12-201ENSMUST00000180938 Iqgap2Q3UQ44 1575 aa13.45□□□□□ -0.26
Trav21-dv12-201ENSMUST00000180938 Cecr2E9Q2Z1 1453 aa13.43□□□□□ -0.26
Trav21-dv12-201ENSMUST00000180938 Frmpd1A2AKB4 1549 aa13.39□□□□□ -0.27
Trav21-dv12-201ENSMUST00000180938 Wdr62Q3U3T8 1523 aa13.39□□□□□ -0.27
Trav21-dv12-201ENSMUST00000180938 Phldb1Q6PDH0 1371 aaKnown RBP13.37□□□□□ -0.27
Trav21-dv12-201ENSMUST00000180938 Ubl4bQ9CQ84 188 aa13.29□□□□□ -0.28
Trav21-dv12-201ENSMUST00000180938 Baz1bQ9Z277 1479 aa13.27□□□□□ -0.29
Trav21-dv12-201ENSMUST00000180938 Dnajc5P60904 198 aa13.22□□□□□ -0.29
Trav21-dv12-201ENSMUST00000180938 Mrc2Q64449 1479 aa13.2□□□□□ -0.3
Trav21-dv12-201ENSMUST00000180938 Unc13aQ4KUS2 1712 aa13.14□□□□□ -0.31
Trav21-dv12-201ENSMUST00000180938 Trim41Q5NCC3 630 aa13.14□□□□□ -0.31
Trav21-dv12-201ENSMUST00000180938 CftrP26361 1476 aa13.04□□□□□ -0.32
Trav21-dv12-201ENSMUST00000180938 Synj1Q8CHC4 1574 aa12.98□□□□□ -0.33
Trav21-dv12-201ENSMUST00000180938 Cttnbp2B9EJA2 1648 aa12.97□□□□□ -0.33
Trav21-dv12-201ENSMUST00000180938 Trap1aP19473 224 aa12.95□□□□□ -0.34
Trav21-dv12-201ENSMUST00000180938 Ppargc1bQ8VHJ7 1014 aa12.92□□□□□ -0.34
Trav21-dv12-201ENSMUST00000180938 Lrriq1Q0P5X1 1673 aa12.92□□□□□ -0.34
Trav21-dv12-201ENSMUST00000180938 Dmrt2Q8BG36 561 aa12.9□□□□□ -0.34
Trav21-dv12-201ENSMUST00000180938 Brd4Q9ESU6 1400 aaKnown RBP12.89□□□□□ -0.35
Trav21-dv12-201ENSMUST00000180938 Hoxd11P23813 323 aa12.88□□□□□ -0.35
Trav21-dv12-201ENSMUST00000180938 Rsf1E9PWW9 1441 aaKnown RBP12.88□□□□□ -0.35
Trav21-dv12-201ENSMUST00000180938 Cux2P70298 1426 aa12.88□□□□□ -0.35
Trav21-dv12-201ENSMUST00000180938 Kif15Q6P9L6 1387 aa12.83□□□□□ -0.36
Trav21-dv12-201ENSMUST00000180938 Ccdc136Q3TVA9 1136 aa12.82□□□□□ -0.36
Trav21-dv12-201ENSMUST00000180938 Kif21aQ9QXL2 1672 aa12.81□□□□□ -0.36
Trav21-dv12-201ENSMUST00000180938 Esf1Q3V1V3 845 aaKnown RBP12.79□□□□□ -0.36
Trav21-dv12-201ENSMUST00000180938 Shroom2A2ALU4 1481 aa12.74□□□□□ -0.37
Trav21-dv12-201ENSMUST00000180938 Eif4g3Q80XI3 1579 aaKnown RBP12.72□□□□□ -0.37
Trav21-dv12-201ENSMUST00000180938 Rtl1Q7M732 1744 aa12.71□□□□□ -0.37
Trav21-dv12-201ENSMUST00000180938 Npm1Q61937 292 aaKnown RBP12.71□□□□□ -0.37
Trav21-dv12-201ENSMUST00000180938 Lamc3Q9R0B6 1581 aa12.69□□□□□ -0.38
Trav21-dv12-201ENSMUST00000180938 Col17a1Q07563 1470 aa12.65□□□□□ -0.38
Trav21-dv12-201ENSMUST00000180938 Urb2E9Q7L1 1524 aaKnown RBP12.63□□□□□ -0.39
Trav21-dv12-201ENSMUST00000180938 Cep164Q5DU05 1446 aa12.62□□□□□ -0.39
Trav21-dv12-201ENSMUST00000180938 Plb1Q3TTY0 1478 aa12.61□□□□□ -0.39
Trav21-dv12-201ENSMUST00000180938 Dhx29Q6PGC1 1365 aaKnown RBP12.6□□□□□ -0.39
Trav21-dv12-201ENSMUST00000180938 Fam163aQ8CAA5 168 aa12.59□□□□□ -0.39
Trav21-dv12-201ENSMUST00000180938 Pabpn1Q8CCS6 302 aaKnown RBP12.59□□□□□ -0.39
Trav21-dv12-201ENSMUST00000180938 Il27Q8K3I6 234 aa12.56□□□□□ -0.4
Trav21-dv12-201ENSMUST00000180938 Top2bQ64511 1612 aa12.52□□□□□ -0.4
Trav21-dv12-201ENSMUST00000180938 LrpprcQ6PB66 1392 aaKnown RBP12.52□□□□□ -0.41
Trav21-dv12-201ENSMUST00000180938 Pelp1Q9DBD5 1123 aaKnown RBP12.5□□□□□ -0.41
Trav21-dv12-201ENSMUST00000180938 Ccdc18Q640L5 1455 aa12.49□□□□□ -0.41
Trav21-dv12-201ENSMUST00000180938 Crocc2F6XLV1 1638 aa12.48□□□□□ -0.41
Trav21-dv12-201ENSMUST00000180938 TnnQ80Z71 1560 aa12.46□□□□□ -0.42
Trav21-dv12-201ENSMUST00000180938 Rusc2Q80U22 1514 aa12.45□□□□□ -0.42
Trav21-dv12-201ENSMUST00000180938 Camsap1A2AHC3 1581 aa12.44□□□□□ -0.42
Trav21-dv12-201ENSMUST00000180938 Ift140E9PY46 1464 aa12.44□□□□□ -0.42
Trav21-dv12-201ENSMUST00000180938 PogzQ8BZH4 1409 aaKnown RBP12.42□□□□□ -0.42
Trav21-dv12-201ENSMUST00000180938 Zcchc11B2RX14 1644 aaKnown RBP12.39□□□□□ -0.43
Trav21-dv12-201ENSMUST00000180938 Golga3P55937 1487 aa12.36□□□□□ -0.43
Trav21-dv12-201ENSMUST00000180938 Slc4a1apE9PX68 744 aa12.36□□□□□ -0.43
Trav21-dv12-201ENSMUST00000180938 Pcdh10E9PXQ7 1057 aa12.35□□□□□ -0.43
Trav21-dv12-201ENSMUST00000180938 Duox2A2AQ99 1517 aa12.35□□□□□ -0.43
Trav21-dv12-201ENSMUST00000180938 Disp1Q3TDN0 1521 aa12.35□□□□□ -0.43
Trav21-dv12-201ENSMUST00000180938 Cngb1E1AZ71 1325 aa12.35□□□□□ -0.43
Trav21-dv12-201ENSMUST00000180938 Znf219Q6IQX8 726 aa12.3□□□□□ -0.44
Trav21-dv12-201ENSMUST00000180938 Nup160Q9Z0W3 1402 aaKnown RBP12.29□□□□□ -0.44
Trav21-dv12-201ENSMUST00000180938 Adgrl3Q80TS3 1537 aa12.27□□□□□ -0.44
Trav21-dv12-201ENSMUST00000180938 Atf5O70191 283 aa12.27□□□□□ -0.45
Trav21-dv12-201ENSMUST00000180938 Cc2d2bA0A286YDU8 1405 aa12.27□□□□□ -0.45
Trav21-dv12-201ENSMUST00000180938 Grin2bQ01097 1482 aa12.26□□□□□ -0.45
Trav21-dv12-201ENSMUST00000180938 Fmn1Q05860 1466 aa12.26□□□□□ -0.45
Trav21-dv12-201ENSMUST00000180938 Samd9lQ69Z37 1561 aa12.26□□□□□ -0.45
Trav21-dv12-201ENSMUST00000180938 Arhgef5E9Q7D5 1581 aa12.23□□□□□ -0.45
Trav21-dv12-201ENSMUST00000180938 PtprkP35822 1457 aa12.23□□□□□ -0.45
Trav21-dv12-201ENSMUST00000180938 Gm156Q58A37 223 aa12.23□□□□□ -0.45
Trav21-dv12-201ENSMUST00000180938 Chrna2Q91X60 512 aa12.23□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms