RNA–Protein interactions for RNA: ENSMUST00000177220.7

Six3os1-212, mousemouse

TSL 1 (best) BASIC

Gene Six3os1, Length 5,601 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Six3os1-212ENSMUST00000177220 Rhox8Q6VSS7 320 aa26.81■■□□□ 1.88
Six3os1-212ENSMUST00000177220 Rpgrip1Q9EPQ2 1331 aa25.34■■□□□ 1.65
Six3os1-212ENSMUST00000177220 Cngb1E1AZ71 1325 aa24.92■■□□□ 1.58
Six3os1-212ENSMUST00000177220 Las1lA2BE28 776 aaKnown RBP24.86■■□□□ 1.57
Six3os1-212ENSMUST00000177220 Ehmt2Q9Z148 1263 aaKnown RBP24.67■■□□□ 1.54
Six3os1-212ENSMUST00000177220 Pelp1Q9DBD5 1123 aaKnown RBP24.46■■□□□ 1.51
Six3os1-212ENSMUST00000177220 Wdr66E9Q743 1299 aa24.3■■□□□ 1.48
Six3os1-212ENSMUST00000177220 Zeb1Q64318 1117 aa23.95■■□□□ 1.43
Six3os1-212ENSMUST00000177220 Amer1Q7TS75 1132 aa23.82■■□□□ 1.4
Six3os1-212ENSMUST00000177220 Ube2uB1AUC4 352 aa23.77■■□□□ 1.4
Six3os1-212ENSMUST00000177220 CenpbP27790 599 aa23.63■■□□□ 1.37
Six3os1-212ENSMUST00000177220 Ccdc136Q3TVA9 1136 aa23.53■■□□□ 1.36
Six3os1-212ENSMUST00000177220 Esf1Q3V1V3 845 aaKnown RBP23.45■■□□□ 1.34
Six3os1-212ENSMUST00000177220 Gab3Q8BSM5 595 aa23.41■■□□□ 1.34
Six3os1-212ENSMUST00000177220 Npm2Q80W85 207 aa23.18■■□□□ 1.3
Six3os1-212ENSMUST00000177220 Acin1Q9JIX8 1338 aaKnown RBP23.07■■□□□ 1.28
Six3os1-212ENSMUST00000177220 Stra8P70278 393 aa23.06■■□□□ 1.28
Six3os1-212ENSMUST00000177220 Myt1lP97500 1187 aa23.05■■□□□ 1.28
Six3os1-212ENSMUST00000177220 Trim41Q5NCC3 630 aa23.01■■□□□ 1.27
Six3os1-212ENSMUST00000177220 4930567H17RikQ3V0K5 233 aa23.01■■□□□ 1.27
Six3os1-212ENSMUST00000177220 NefmP08553 848 aa22.95■■□□□ 1.27
Six3os1-212ENSMUST00000177220 Slc24a1Q91WD8 1130 aa22.94■■□□□ 1.26
Six3os1-212ENSMUST00000177220 Ttbk1Q6PCN3 1308 aa22.9■■□□□ 1.26
Six3os1-212ENSMUST00000177220 Myt1Q8CFC2 1127 aa22.8■■□□□ 1.24
Six3os1-212ENSMUST00000177220 UbtfP25976 765 aaKnown RBP22.75■■□□□ 1.23
Six3os1-212ENSMUST00000177220 4933416C03RikQ3V063 378 aa22.73■■□□□ 1.23
Six3os1-212ENSMUST00000177220 Cdk11bP24788 784 aaKnown RBP22.68■■□□□ 1.22
Six3os1-212ENSMUST00000177220 Pcgf6Q99NA9 353 aa22.48■■□□□ 1.19
Six3os1-212ENSMUST00000177220 Tnnt3Q9QZ47 272 aa22.44■■□□□ 1.18
Six3os1-212ENSMUST00000177220 NrdcQ8BHG1 1161 aa22.35■■□□□ 1.17
Six3os1-212ENSMUST00000177220 Nop58Q6DFW4 536 aaKnown RBP22.34■■□□□ 1.17
Six3os1-212ENSMUST00000177220 NeflP08551 543 aa22.3■■□□□ 1.16
Six3os1-212ENSMUST00000177220 Eif5bQ05D44 1216 aaKnown RBP22.24■■□□□ 1.15
Six3os1-212ENSMUST00000177220 Anp32bQ9EST5 272 aaKnown RBP22.23■■□□□ 1.15
Six3os1-212ENSMUST00000177220 HrcG5E8J6 738 aa22.22■■□□□ 1.15
Six3os1-212ENSMUST00000177220 Rtl5Q5DTT4 599 aa22.11■■□□□ 1.13
Six3os1-212ENSMUST00000177220 NclP09405 707 aaKnown RBP22.09■■□□□ 1.13
Six3os1-212ENSMUST00000177220 Ppargc1bQ8VHJ7 1014 aa22.07■■□□□ 1.12
Six3os1-212ENSMUST00000177220 Neurod1Q60867 357 aa22.07■■□□□ 1.12
Six3os1-212ENSMUST00000177220 Supt5hO55201 1082 aaKnown RBP21.98■■□□□ 1.11
Six3os1-212ENSMUST00000177220 Fam50aQ9WV03 339 aaKnown RBP21.97■■□□□ 1.11
Six3os1-212ENSMUST00000177220 DiexfQ8BTT6 772 aaKnown RBP21.97■■□□□ 1.11
Six3os1-212ENSMUST00000177220 Os9Q8K2C7 672 aa21.84■■□□□ 1.09
Six3os1-212ENSMUST00000177220 Il27Q8K3I6 234 aa21.82■■□□□ 1.08
Six3os1-212ENSMUST00000177220 Ccdc180J3QNE4 1664 aa21.81■■□□□ 1.08
Six3os1-212ENSMUST00000177220 TonslQ6NZL6 1363 aa21.8■■□□□ 1.08
Six3os1-212ENSMUST00000177220 Ap3b1Q9Z1T1 1105 aa21.79■■□□□ 1.08
Six3os1-212ENSMUST00000177220 DaxxO35613 739 aa21.73■■□□□ 1.07
Six3os1-212ENSMUST00000177220 NischQ80TM9 1593 aa21.68■■□□□ 1.06
Six3os1-212ENSMUST00000177220 Anp32aO35381 247 aa21.67■■□□□ 1.06
Six3os1-212ENSMUST00000177220 Mier1Q5UAK0 511 aa21.48■■□□□ 1.03
Six3os1-212ENSMUST00000177220 ClspnQ80YR7 1315 aa21.41■■□□□ 1.02
Six3os1-212ENSMUST00000177220 Gm38655A0A286YDK6 273 aa21.32■■□□□ 1
Six3os1-212ENSMUST00000177220 Rtl1Q7M732 1744 aa21.27■■□□□ 1
Six3os1-212ENSMUST00000177220 ArxO35085 564 aa21.25■□□□□ 0.99
Six3os1-212ENSMUST00000177220 Zbtb7cQ8VCZ7 619 aa21.2■□□□□ 0.98
Six3os1-212ENSMUST00000177220 Csrnp3P59055 597 aa21.18■□□□□ 0.98
Six3os1-212ENSMUST00000177220 CatipB9EKE5 520 aa21.16■□□□□ 0.98
Six3os1-212ENSMUST00000177220 Nlrp6Q91WS2 869 aa21.14■□□□□ 0.98
Six3os1-212ENSMUST00000177220 Polr3glQ8R0C0 218 aa21.14■□□□□ 0.97
Six3os1-212ENSMUST00000177220 Mapk8ip2Q9ERE9 830 aa21.13■□□□□ 0.97
Six3os1-212ENSMUST00000177220 Anks4bQ8K3X6 423 aa21.12■□□□□ 0.97
Six3os1-212ENSMUST00000177220 Chic1Q8CBW7 227 aa21.11■□□□□ 0.97
Six3os1-212ENSMUST00000177220 Zbtb4Q5F293 982 aa21.1■□□□□ 0.97
Six3os1-212ENSMUST00000177220 Aplp2Q06335 707 aa21.08■□□□□ 0.96
Six3os1-212ENSMUST00000177220 Lmod2Q3UHZ5 550 aa21.08■□□□□ 0.96
Six3os1-212ENSMUST00000177220 Hnrnpul2Q00PI9 745 aaKnown RBP21.07■□□□□ 0.96
Six3os1-212ENSMUST00000177220 Upf2A2AT37 1269 aaKnown RBP21.04■□□□□ 0.96
Six3os1-212ENSMUST00000177220 Plekhg3Q4VAC9 1341 aa21.03■□□□□ 0.96
Six3os1-212ENSMUST00000177220 Zcchc6Q5BLK4 1491 aaKnown RBP21.03■□□□□ 0.96
Six3os1-212ENSMUST00000177220 Ythdc1E9Q5K9 736 aaKnown RBP20.99■□□□□ 0.95
Six3os1-212ENSMUST00000177220 Ppp4r2Q0VGB7 417 aa20.98■□□□□ 0.95
Six3os1-212ENSMUST00000177220 Prdm10Q3UTQ7 1184 aa20.96■□□□□ 0.95
Six3os1-212ENSMUST00000177220 Sall2Q9QX96 1004 aa20.96■□□□□ 0.95
Six3os1-212ENSMUST00000177220 Lmod3E9QA62 571 aa20.96■□□□□ 0.95
Six3os1-212ENSMUST00000177220 Calr4Q3TQS0 420 aa20.94■□□□□ 0.94
Six3os1-212ENSMUST00000177220 Gm13697A2AK42 830 aa20.92■□□□□ 0.94
Six3os1-212ENSMUST00000177220 Erich6D3Z6S9 713 aa20.87■□□□□ 0.93
Six3os1-212ENSMUST00000177220 Eid3Q3V124 375 aa20.87■□□□□ 0.93
Six3os1-212ENSMUST00000177220 Hsp90aa1P07901 733 aaKnown RBP20.86■□□□□ 0.93
Six3os1-212ENSMUST00000177220 Atp1b4Q99ME6 356 aa20.85■□□□□ 0.93
Six3os1-212ENSMUST00000177220 Ccdc9Q8VC31 543 aaKnown RBP20.82■□□□□ 0.92
Six3os1-212ENSMUST00000177220 Wdr43Q6ZQL4 677 aaKnown RBP20.79■□□□□ 0.92
Six3os1-212ENSMUST00000177220 DekQ7TNV0 380 aaKnown RBP20.75■□□□□ 0.91
Six3os1-212ENSMUST00000177220 Rangap1P46061 589 aaKnown RBP20.72■□□□□ 0.91
Six3os1-212ENSMUST00000177220 Vsig10D3YX43 558 aa20.7■□□□□ 0.9
Six3os1-212ENSMUST00000177220 Trim44Q9QXA7 346 aa20.7■□□□□ 0.9
Six3os1-212ENSMUST00000177220 Rad21Q61550 635 aaKnown RBP20.67■□□□□ 0.9
Six3os1-212ENSMUST00000177220 Npm1Q61937 292 aaKnown RBP20.65■□□□□ 0.9
Six3os1-212ENSMUST00000177220 Hdac5Q9Z2V6 1113 aa20.65■□□□□ 0.9
Six3os1-212ENSMUST00000177220 Ifnlr1Q8CGK5 535 aa20.63■□□□□ 0.89
Six3os1-212ENSMUST00000177220 Gm13695A2AK44 830 aa20.59■□□□□ 0.89
Six3os1-212ENSMUST00000177220 Mrs2Q5NCE8 434 aa20.57■□□□□ 0.88
Six3os1-212ENSMUST00000177220 CanxP35564 591 aaKnown RBP20.55■□□□□ 0.88
Six3os1-212ENSMUST00000177220 Ccer2J3QPU5 274 aa20.53■□□□□ 0.88
Six3os1-212ENSMUST00000177220 Hsp90ab1P11499 724 aaKnown RBP20.49■□□□□ 0.87
Six3os1-212ENSMUST00000177220 Clip1Q922J3 1391 aa20.48■□□□□ 0.87
Six3os1-212ENSMUST00000177220 Fam71e1A1L3C1 212 aa20.47■□□□□ 0.87
Six3os1-212ENSMUST00000177220 Trim30dE9PWL0 497 aa20.43■□□□□ 0.86
Six3os1-212ENSMUST00000177220 PtmaP26350 111 aa20.43■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 52.7 ms