RNA–Protein interactions for RNA: ENSMUST00000172732.7

Rfc1-201, Transcript of Replication factor C subunit 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Rfc1, Length 4,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1-201ENSMUST00000172732 Rpgrip1Q9EPQ2 1331 aa12.56□□□□□ -0.4
Rfc1-201ENSMUST00000172732 Rhox8Q6VSS7 320 aa11.96□□□□□ -0.5
Rfc1-201ENSMUST00000172732 Las1lA2BE28 776 aaKnown RBP11.92□□□□□ -0.5
Rfc1-201ENSMUST00000172732 Cngb1E1AZ71 1325 aa11.69□□□□□ -0.54
Rfc1-201ENSMUST00000172732 Abcc9P70170 1546 aa11.58□□□□□ -0.56
Rfc1-201ENSMUST00000172732 Myt1Q8CFC2 1127 aa11.53□□□□□ -0.56
Rfc1-201ENSMUST00000172732 NischQ80TM9 1593 aa11.48□□□□□ -0.57
Rfc1-201ENSMUST00000172732 Acin1Q9JIX8 1338 aaKnown RBP11.41□□□□□ -0.58
Rfc1-201ENSMUST00000172732 Pelp1Q9DBD5 1123 aaKnown RBP11.33□□□□□ -0.6
Rfc1-201ENSMUST00000172732 CenpbP27790 599 aa11.24□□□□□ -0.61
Rfc1-201ENSMUST00000172732 Gm35339A0A140LHH9 1649 aa11.23□□□□□ -0.61
Rfc1-201ENSMUST00000172732 Ccdc180J3QNE4 1664 aa11.12□□□□□ -0.63
Rfc1-201ENSMUST00000172732 Rtl1Q7M732 1744 aa11.09□□□□□ -0.63
Rfc1-201ENSMUST00000172732 Pcgf6Q99NA9 353 aa11.08□□□□□ -0.64
Rfc1-201ENSMUST00000172732 Ehmt2Q9Z148 1263 aaKnown RBP11.07□□□□□ -0.64
Rfc1-201ENSMUST00000172732 NefmP08553 848 aa11.04□□□□□ -0.64
Rfc1-201ENSMUST00000172732 Abcc8B2RUS7 1588 aa10.99□□□□□ -0.65
Rfc1-201ENSMUST00000172732 Wdr66E9Q743 1299 aa10.94□□□□□ -0.66
Rfc1-201ENSMUST00000172732 Zeb1Q64318 1117 aa10.92□□□□□ -0.66
Rfc1-201ENSMUST00000172732 HrcG5E8J6 738 aa10.91□□□□□ -0.66
Rfc1-201ENSMUST00000172732 Amer1Q7TS75 1132 aa10.87□□□□□ -0.67
Rfc1-201ENSMUST00000172732 Stra8P70278 393 aa10.81□□□□□ -0.68
Rfc1-201ENSMUST00000172732 Rtl5Q5DTT4 599 aa10.81□□□□□ -0.68
Rfc1-201ENSMUST00000172732 DiexfQ8BTT6 772 aaKnown RBP10.81□□□□□ -0.68
Rfc1-201ENSMUST00000172732 Cdk11bP24788 784 aaKnown RBP10.77□□□□□ -0.68
Rfc1-201ENSMUST00000172732 Tnnt3Q9QZ47 272 aa10.77□□□□□ -0.68
Rfc1-201ENSMUST00000172732 NacadQ5SWP3 1504 aa10.76□□□□□ -0.69
Rfc1-201ENSMUST00000172732 Trim41Q5NCC3 630 aa10.71□□□□□ -0.69
Rfc1-201ENSMUST00000172732 Supt5hO55201 1082 aaKnown RBP10.64□□□□□ -0.71
Rfc1-201ENSMUST00000172732 Nop58Q6DFW4 536 aaKnown RBP10.61□□□□□ -0.71
Rfc1-201ENSMUST00000172732 Ccdc136Q3TVA9 1136 aa10.59□□□□□ -0.71
Rfc1-201ENSMUST00000172732 Aplp2Q06335 707 aa10.58□□□□□ -0.72
Rfc1-201ENSMUST00000172732 Anks4bQ8K3X6 423 aa10.58□□□□□ -0.72
Rfc1-201ENSMUST00000172732 Pds5bQ4VA53 1446 aaKnown RBP10.56□□□□□ -0.72
Rfc1-201ENSMUST00000172732 Dcaf1Q80TR8 1506 aa10.55□□□□□ -0.72
Rfc1-201ENSMUST00000172732 Neurod1Q60867 357 aa10.52□□□□□ -0.73
Rfc1-201ENSMUST00000172732 Ercc6F8VPZ5 1481 aa10.47□□□□□ -0.73
Rfc1-201ENSMUST00000172732 ScribQ80U72 1612 aa10.43□□□□□ -0.74
Rfc1-201ENSMUST00000172732 Gab3Q8BSM5 595 aa10.42□□□□□ -0.74
Rfc1-201ENSMUST00000172732 Anp32aO35381 247 aa10.41□□□□□ -0.74
Rfc1-201ENSMUST00000172732 Kdm5dQ62240 1548 aa10.39□□□□□ -0.75
Rfc1-201ENSMUST00000172732 ClspnQ80YR7 1315 aa10.38□□□□□ -0.75
Rfc1-201ENSMUST00000172732 Sycp2Q9CUU3 1500 aa10.37□□□□□ -0.75
Rfc1-201ENSMUST00000172732 Ccdc9Q8VC31 543 aaKnown RBP10.36□□□□□ -0.75
Rfc1-201ENSMUST00000172732 Dnajc5bQ9CQ94 199 aa10.35□□□□□ -0.75
Rfc1-201ENSMUST00000172732 Ubl4bQ9CQ84 188 aa10.33□□□□□ -0.76
Rfc1-201ENSMUST00000172732 Esf1Q3V1V3 845 aaKnown RBP10.33□□□□□ -0.76
Rfc1-201ENSMUST00000172732 Dnajc5P60904 198 aa10.32□□□□□ -0.76
Rfc1-201ENSMUST00000172732 4930567H17RikQ3V0K5 233 aa10.32□□□□□ -0.76
Rfc1-201ENSMUST00000172732 4933416C03RikQ3V063 378 aa10.31□□□□□ -0.76
Rfc1-201ENSMUST00000172732 UbtfP25976 765 aaKnown RBP10.3□□□□□ -0.76
Rfc1-201ENSMUST00000172732 Csrnp3P59055 597 aa10.29□□□□□ -0.76
Rfc1-201ENSMUST00000172732 TonslQ6NZL6 1363 aa10.28□□□□□ -0.76
Rfc1-201ENSMUST00000172732 1700123L14RikQ3V2K7 440 aa10.26□□□□□ -0.77
Rfc1-201ENSMUST00000172732 Mier1Q5UAK0 511 aa10.24□□□□□ -0.77
Rfc1-201ENSMUST00000172732 Ttbk1Q6PCN3 1308 aa10.23□□□□□ -0.77
Rfc1-201ENSMUST00000172732 Npm2Q80W85 207 aa10.22□□□□□ -0.77
Rfc1-201ENSMUST00000172732 Sall2Q9QX96 1004 aa10.21□□□□□ -0.78
Rfc1-201ENSMUST00000172732 Atad2bE9Q166 1460 aaKnown RBP10.19□□□□□ -0.78
Rfc1-201ENSMUST00000172732 Rb1cc1Q9ESK9 1588 aa10.19□□□□□ -0.78
Rfc1-201ENSMUST00000172732 Ube2uB1AUC4 352 aa10.19□□□□□ -0.78
Rfc1-201ENSMUST00000172732 Baz1bQ9Z277 1479 aa10.19□□□□□ -0.78
Rfc1-201ENSMUST00000172732 Bcl11aQ9QYE3 773 aa10.17□□□□□ -0.78
Rfc1-201ENSMUST00000172732 Zcchc6Q5BLK4 1491 aaKnown RBP10.15□□□□□ -0.78
Rfc1-201ENSMUST00000172732 NrdcQ8BHG1 1161 aa10.15□□□□□ -0.78
Rfc1-201ENSMUST00000172732 Myt1lP97500 1187 aa10.14□□□□□ -0.79
Rfc1-201ENSMUST00000172732 Phldb1Q6PDH0 1371 aaKnown RBP10.14□□□□□ -0.79
Rfc1-201ENSMUST00000172732 NeflP08551 543 aa10.13□□□□□ -0.79
Rfc1-201ENSMUST00000172732 Cep164Q5DU05 1446 aa10.1□□□□□ -0.79
Rfc1-201ENSMUST00000172732 Npm1Q61937 292 aaKnown RBP10.08□□□□□ -0.8
Rfc1-201ENSMUST00000172732 Slc24a1Q91WD8 1130 aa10.07□□□□□ -0.8
Rfc1-201ENSMUST00000172732 Anp32bQ9EST5 272 aaKnown RBP10.07□□□□□ -0.8
Rfc1-201ENSMUST00000172732 NclP09405 707 aaKnown RBP10.06□□□□□ -0.8
Rfc1-201ENSMUST00000172732 Pabpn1Q8CCS6 302 aaKnown RBP10□□□□□ -0.81
Rfc1-201ENSMUST00000172732 DaxxO35613 739 aa10□□□□□ -0.81
Rfc1-201ENSMUST00000172732 Hsp90aa1P07901 733 aaKnown RBP9.99□□□□□ -0.81
Rfc1-201ENSMUST00000172732 Calr4Q3TQS0 420 aa9.98□□□□□ -0.81
Rfc1-201ENSMUST00000172732 Fam71e1A1L3C1 212 aa9.97□□□□□ -0.81
Rfc1-201ENSMUST00000172732 Cc2d2aQ8CFW7 1633 aa9.96□□□□□ -0.81
Rfc1-201ENSMUST00000172732 Eif5bQ05D44 1216 aaKnown RBP9.95□□□□□ -0.82
Rfc1-201ENSMUST00000172732 Ccdc27Q3V036 639 aa9.95□□□□□ -0.82
Rfc1-201ENSMUST00000172732 Mrc2Q64449 1479 aa9.92□□□□□ -0.82
Rfc1-201ENSMUST00000172732 Thoc2B1AZI6 1594 aaKnown RBP9.92□□□□□ -0.82
Rfc1-201ENSMUST00000172732 Wdr43Q6ZQL4 677 aaKnown RBP9.92□□□□□ -0.82
Rfc1-201ENSMUST00000172732 Gm38655A0A286YDK6 273 aa9.92□□□□□ -0.82
Rfc1-201ENSMUST00000172732 Ythdc1E9Q5K9 736 aaKnown RBP9.92□□□□□ -0.82
Rfc1-201ENSMUST00000172732 Ppargc1bQ8VHJ7 1014 aa9.92□□□□□ -0.82
Rfc1-201ENSMUST00000172732 BicraF8VPZ9 1578 aa9.89□□□□□ -0.83
Rfc1-201ENSMUST00000172732 Crybg2B7ZCC2 1516 aa9.88□□□□□ -0.83
Rfc1-201ENSMUST00000172732 Ccer2J3QPU5 274 aa9.87□□□□□ -0.83
Rfc1-201ENSMUST00000172732 Irx3P81067 507 aa9.87□□□□□ -0.83
Rfc1-201ENSMUST00000172732 Upf2A2AT37 1269 aaKnown RBP9.86□□□□□ -0.83
Rfc1-201ENSMUST00000172732 Ppp4r2Q0VGB7 417 aa9.85□□□□□ -0.83
Rfc1-201ENSMUST00000172732 Plekhg3Q4VAC9 1341 aa9.84□□□□□ -0.83
Rfc1-201ENSMUST00000172732 Fam135aQ6NS59 1506 aa9.83□□□□□ -0.84
Rfc1-201ENSMUST00000172732 Baz1aO88379 1555 aa9.82□□□□□ -0.84
Rfc1-201ENSMUST00000172732 Smarca2Q6DIC0 1577 aa9.81□□□□□ -0.84
Rfc1-201ENSMUST00000172732 Fam50aQ9WV03 339 aaKnown RBP9.8□□□□□ -0.84
Rfc1-201ENSMUST00000172732 Rsf1E9PWW9 1441 aaKnown RBP9.8□□□□□ -0.84
Rfc1-201ENSMUST00000172732 Il27Q8K3I6 234 aa9.8□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 115.3 ms