RNA–Protein interactions for RNA: ENSMUST00000171108.7

Rai1-207, Transcript of Retinoic acid-induced protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rai1, Length 7,125 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1-207ENSMUST00000171108 Rhox8Q6VSS7 320 aa21.4■■□□□ 1.02
Rai1-207ENSMUST00000171108 Rpgrip1Q9EPQ2 1331 aa19.37■□□□□ 0.69
Rai1-207ENSMUST00000171108 Ehmt2Q9Z148 1263 aaKnown RBP19.28■□□□□ 0.68
Rai1-207ENSMUST00000171108 Esf1Q3V1V3 845 aaKnown RBP19.05■□□□□ 0.64
Rai1-207ENSMUST00000171108 Cngb1E1AZ71 1325 aa19■□□□□ 0.63
Rai1-207ENSMUST00000171108 Ube2uB1AUC4 352 aa18.95■□□□□ 0.62
Rai1-207ENSMUST00000171108 Ccdc136Q3TVA9 1136 aa18.93■□□□□ 0.62
Rai1-207ENSMUST00000171108 Wdr66E9Q743 1299 aa18.83■□□□□ 0.61
Rai1-207ENSMUST00000171108 Zeb1Q64318 1117 aa18.81■□□□□ 0.6
Rai1-207ENSMUST00000171108 Las1lA2BE28 776 aaKnown RBP18.75■□□□□ 0.59
Rai1-207ENSMUST00000171108 Gab3Q8BSM5 595 aa18.65■□□□□ 0.58
Rai1-207ENSMUST00000171108 Npm2Q80W85 207 aa18.64■□□□□ 0.58
Rai1-207ENSMUST00000171108 Myt1lP97500 1187 aa18.47■□□□□ 0.55
Rai1-207ENSMUST00000171108 Pelp1Q9DBD5 1123 aaKnown RBP18.46■□□□□ 0.55
Rai1-207ENSMUST00000171108 Trim41Q5NCC3 630 aa18.35■□□□□ 0.53
Rai1-207ENSMUST00000171108 NischQ80TM9 1593 aa18.05■□□□□ 0.48
Rai1-207ENSMUST00000171108 UbtfP25976 765 aaKnown RBP17.96■□□□□ 0.47
Rai1-207ENSMUST00000171108 Slc24a1Q91WD8 1130 aa17.93■□□□□ 0.46
Rai1-207ENSMUST00000171108 Amer1Q7TS75 1132 aa17.87■□□□□ 0.45
Rai1-207ENSMUST00000171108 Il27Q8K3I6 234 aa17.83■□□□□ 0.45
Rai1-207ENSMUST00000171108 Acin1Q9JIX8 1338 aaKnown RBP17.78■□□□□ 0.44
Rai1-207ENSMUST00000171108 NefmP08553 848 aa17.68■□□□□ 0.42
Rai1-207ENSMUST00000171108 Stra8P70278 393 aa17.67■□□□□ 0.42
Rai1-207ENSMUST00000171108 CenpbP27790 599 aa17.63■□□□□ 0.41
Rai1-207ENSMUST00000171108 Ap3b1Q9Z1T1 1105 aa17.6■□□□□ 0.41
Rai1-207ENSMUST00000171108 Ccdc180J3QNE4 1664 aa17.57■□□□□ 0.4
Rai1-207ENSMUST00000171108 Neurod1Q60867 357 aa17.54■□□□□ 0.4
Rai1-207ENSMUST00000171108 Os9Q8K2C7 672 aa17.53■□□□□ 0.4
Rai1-207ENSMUST00000171108 Fam50aQ9WV03 339 aaKnown RBP17.48■□□□□ 0.39
Rai1-207ENSMUST00000171108 Rtl1Q7M732 1744 aa17.42■□□□□ 0.38
Rai1-207ENSMUST00000171108 HrcG5E8J6 738 aa17.4■□□□□ 0.38
Rai1-207ENSMUST00000171108 Anp32bQ9EST5 272 aaKnown RBP17.36■□□□□ 0.37
Rai1-207ENSMUST00000171108 NrdcQ8BHG1 1161 aa17.36■□□□□ 0.37
Rai1-207ENSMUST00000171108 Gm35339A0A140LHH9 1649 aa17.34■□□□□ 0.37
Rai1-207ENSMUST00000171108 Ttbk1Q6PCN3 1308 aa17.33■□□□□ 0.37
Rai1-207ENSMUST00000171108 NclP09405 707 aaKnown RBP17.32■□□□□ 0.36
Rai1-207ENSMUST00000171108 Eif5bQ05D44 1216 aaKnown RBP17.31■□□□□ 0.36
Rai1-207ENSMUST00000171108 Abcc9P70170 1546 aa17.29■□□□□ 0.36
Rai1-207ENSMUST00000171108 Zcchc6Q5BLK4 1491 aaKnown RBP17.27■□□□□ 0.36
Rai1-207ENSMUST00000171108 NeflP08551 543 aa17.25■□□□□ 0.35
Rai1-207ENSMUST00000171108 Cdk11bP24788 784 aaKnown RBP17.22■□□□□ 0.35
Rai1-207ENSMUST00000171108 4933416C03RikQ3V063 378 aa17.2■□□□□ 0.34
Rai1-207ENSMUST00000171108 Zbtb7cQ8VCZ7 619 aa17.2■□□□□ 0.34
Rai1-207ENSMUST00000171108 4930567H17RikQ3V0K5 233 aa17.19■□□□□ 0.34
Rai1-207ENSMUST00000171108 Ppargc1bQ8VHJ7 1014 aa17.19■□□□□ 0.34
Rai1-207ENSMUST00000171108 Gm13697A2AK42 830 aa17.09■□□□□ 0.33
Rai1-207ENSMUST00000171108 Ifnlr1Q8CGK5 535 aa17.09■□□□□ 0.33
Rai1-207ENSMUST00000171108 Pcgf6Q99NA9 353 aa17.08■□□□□ 0.32
Rai1-207ENSMUST00000171108 Myt1Q8CFC2 1127 aa17.08■□□□□ 0.32
Rai1-207ENSMUST00000171108 Chic1Q8CBW7 227 aa17.06■□□□□ 0.32
Rai1-207ENSMUST00000171108 Tnnt3Q9QZ47 272 aa17.06■□□□□ 0.32
Rai1-207ENSMUST00000171108 Hnrnpul2Q00PI9 745 aaKnown RBP17.02■□□□□ 0.31
Rai1-207ENSMUST00000171108 Nop58Q6DFW4 536 aaKnown RBP17.01■□□□□ 0.31
Rai1-207ENSMUST00000171108 TonslQ6NZL6 1363 aa16.97■□□□□ 0.31
Rai1-207ENSMUST00000171108 Npm1Q61937 292 aaKnown RBP16.95■□□□□ 0.3
Rai1-207ENSMUST00000171108 Lmod2Q3UHZ5 550 aa16.93■□□□□ 0.3
Rai1-207ENSMUST00000171108 Atp1b4Q99ME6 356 aa16.92■□□□□ 0.3
Rai1-207ENSMUST00000171108 Zbtb4Q5F293 982 aa16.89■□□□□ 0.29
Rai1-207ENSMUST00000171108 Erich6D3Z6S9 713 aa16.87■□□□□ 0.29
Rai1-207ENSMUST00000171108 Plppr3Q7TPB0 716 aa16.83■□□□□ 0.29
Rai1-207ENSMUST00000171108 Prdm10Q3UTQ7 1184 aa16.79■□□□□ 0.28
Rai1-207ENSMUST00000171108 Gm13695A2AK44 830 aa16.77■□□□□ 0.27
Rai1-207ENSMUST00000171108 Plekhg3Q4VAC9 1341 aa16.76■□□□□ 0.27
Rai1-207ENSMUST00000171108 Nlrp6Q91WS2 869 aa16.75■□□□□ 0.27
Rai1-207ENSMUST00000171108 Mier1Q5UAK0 511 aa16.74■□□□□ 0.27
Rai1-207ENSMUST00000171108 Supt5hO55201 1082 aaKnown RBP16.73■□□□□ 0.27
Rai1-207ENSMUST00000171108 Fkbp15Q6P9Q6 1216 aaKnown RBP16.71■□□□□ 0.26
Rai1-207ENSMUST00000171108 Polr3glQ8R0C0 218 aa16.7■□□□□ 0.26
Rai1-207ENSMUST00000171108 Rtl5Q5DTT4 599 aa16.69■□□□□ 0.26
Rai1-207ENSMUST00000171108 DiexfQ8BTT6 772 aaKnown RBP16.58■□□□□ 0.24
Rai1-207ENSMUST00000171108 Mapk8ip2Q9ERE9 830 aa16.55■□□□□ 0.24
Rai1-207ENSMUST00000171108 ArxO35085 564 aa16.5■□□□□ 0.23
Rai1-207ENSMUST00000171108 ClspnQ80YR7 1315 aa16.5■□□□□ 0.23
Rai1-207ENSMUST00000171108 Rangap1P46061 589 aaKnown RBP16.47■□□□□ 0.23
Rai1-207ENSMUST00000171108 Hdac5Q9Z2V6 1113 aa16.46■□□□□ 0.23
Rai1-207ENSMUST00000171108 DaxxO35613 739 aa16.44■□□□□ 0.22
Rai1-207ENSMUST00000171108 Eid3Q3V124 375 aa16.39■□□□□ 0.21
Rai1-207ENSMUST00000171108 Anp32aO35381 247 aa16.38■□□□□ 0.21
Rai1-207ENSMUST00000171108 Safb2Q80YR5 991 aaKnown RBP16.36■□□□□ 0.21
Rai1-207ENSMUST00000171108 Csrnp3P59055 597 aa16.36■□□□□ 0.21
Rai1-207ENSMUST00000171108 Ubl4bQ9CQ84 188 aa16.35■□□□□ 0.21
Rai1-207ENSMUST00000171108 Abcc8B2RUS7 1588 aa16.33■□□□□ 0.2
Rai1-207ENSMUST00000171108 Clip1Q922J3 1391 aa16.31■□□□□ 0.2
Rai1-207ENSMUST00000171108 Dcaf1Q80TR8 1506 aa16.27■□□□□ 0.19
Rai1-207ENSMUST00000171108 P3h3Q8CG70 732 aa16.25■□□□□ 0.19
Rai1-207ENSMUST00000171108 Chic2Q9D9G3 165 aa16.23■□□□□ 0.19
Rai1-207ENSMUST00000171108 Brd4Q9ESU6 1400 aaKnown RBP16.22■□□□□ 0.19
Rai1-207ENSMUST00000171108 Rad21Q61550 635 aaKnown RBP16.21■□□□□ 0.19
Rai1-207ENSMUST00000171108 Gm38655A0A286YDK6 273 aa16.21■□□□□ 0.19
Rai1-207ENSMUST00000171108 Cep164Q5DU05 1446 aa16.2■□□□□ 0.18
Rai1-207ENSMUST00000171108 Anks4bQ8K3X6 423 aa16.15■□□□□ 0.18
Rai1-207ENSMUST00000171108 Ccer2J3QPU5 274 aa16.13■□□□□ 0.17
Rai1-207ENSMUST00000171108 Hsp90aa1P07901 733 aaKnown RBP16.12■□□□□ 0.17
Rai1-207ENSMUST00000171108 Fgd1P52734 960 aa16.09■□□□□ 0.17
Rai1-207ENSMUST00000171108 Irx6Q9ER75 438 aa16.09■□□□□ 0.17
Rai1-207ENSMUST00000171108 CatipB9EKE5 520 aa16.09■□□□□ 0.17
Rai1-207ENSMUST00000171108 Trim26Q99PN3 545 aa16.08■□□□□ 0.16
Rai1-207ENSMUST00000171108 Sall2Q9QX96 1004 aa16.08■□□□□ 0.16
Rai1-207ENSMUST00000171108 Upf2A2AT37 1269 aaKnown RBP16.06■□□□□ 0.16
Rai1-207ENSMUST00000171108 Rb1cc1Q9ESK9 1588 aa16.06■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 55 ms