RNA–Protein interactions for RNA: ENSMUST00000168435.6

Usp35-202, Transcript of Ubiquitin-specific peptidase 35, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp35, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35-202ENSMUST00000168435 Rhox8Q6VSS7 320 aa29.11■■■□□ 2.25
Usp35-202ENSMUST00000168435 NischQ80TM9 1593 aa27.8■■■□□ 2.04
Usp35-202ENSMUST00000168435 Ccdc136Q3TVA9 1136 aa26.68■■□□□ 1.86
Usp35-202ENSMUST00000168435 Ehmt2Q9Z148 1263 aaKnown RBP26.47■■□□□ 1.83
Usp35-202ENSMUST00000168435 Abcc9P70170 1546 aa26.26■■□□□ 1.79
Usp35-202ENSMUST00000168435 Abcc8B2RUS7 1588 aa25.89■■□□□ 1.73
Usp35-202ENSMUST00000168435 Cngb1E1AZ71 1325 aa25.69■■□□□ 1.7
Usp35-202ENSMUST00000168435 Gab3Q8BSM5 595 aa25.61■■□□□ 1.69
Usp35-202ENSMUST00000168435 Gm35339A0A140LHH9 1649 aa25.6■■□□□ 1.69
Usp35-202ENSMUST00000168435 Esf1Q3V1V3 845 aaKnown RBP25.51■■□□□ 1.67
Usp35-202ENSMUST00000168435 Trim41Q5NCC3 630 aa25.46■■□□□ 1.67
Usp35-202ENSMUST00000168435 Rpgrip1Q9EPQ2 1331 aa25.44■■□□□ 1.66
Usp35-202ENSMUST00000168435 Zcchc6Q5BLK4 1491 aaKnown RBP25.08■■□□□ 1.61
Usp35-202ENSMUST00000168435 Myt1lP97500 1187 aa24.86■■□□□ 1.57
Usp35-202ENSMUST00000168435 Acin1Q9JIX8 1338 aaKnown RBP24.82■■□□□ 1.56
Usp35-202ENSMUST00000168435 Zeb1Q64318 1117 aa24.73■■□□□ 1.55
Usp35-202ENSMUST00000168435 Npm2Q80W85 207 aa24.64■■□□□ 1.53
Usp35-202ENSMUST00000168435 Ccdc180J3QNE4 1664 aa24.63■■□□□ 1.53
Usp35-202ENSMUST00000168435 Il27Q8K3I6 234 aa24.54■■□□□ 1.52
Usp35-202ENSMUST00000168435 HrcG5E8J6 738 aa24.47■■□□□ 1.51
Usp35-202ENSMUST00000168435 Pcgf6Q99NA9 353 aa24.4■■□□□ 1.5
Usp35-202ENSMUST00000168435 Rb1cc1Q9ESK9 1588 aa24.37■■□□□ 1.49
Usp35-202ENSMUST00000168435 UbtfP25976 765 aaKnown RBP24.36■■□□□ 1.49
Usp35-202ENSMUST00000168435 Rtl1Q7M732 1744 aa24.34■■□□□ 1.49
Usp35-202ENSMUST00000168435 Wdr66E9Q743 1299 aa24.27■■□□□ 1.48
Usp35-202ENSMUST00000168435 Chic1Q8CBW7 227 aa24.23■■□□□ 1.47
Usp35-202ENSMUST00000168435 Supt5hO55201 1082 aaKnown RBP24.09■■□□□ 1.45
Usp35-202ENSMUST00000168435 Dcaf1Q80TR8 1506 aa24.08■■□□□ 1.45
Usp35-202ENSMUST00000168435 Ap3b1Q9Z1T1 1105 aa24.06■■□□□ 1.44
Usp35-202ENSMUST00000168435 Kdm5dQ62240 1548 aa24.01■■□□□ 1.43
Usp35-202ENSMUST00000168435 Ppargc1bQ8VHJ7 1014 aa23.96■■□□□ 1.43
Usp35-202ENSMUST00000168435 Ube2uB1AUC4 352 aa23.95■■□□□ 1.42
Usp35-202ENSMUST00000168435 NacadQ5SWP3 1504 aa23.92■■□□□ 1.42
Usp35-202ENSMUST00000168435 Las1lA2BE28 776 aaKnown RBP23.83■■□□□ 1.41
Usp35-202ENSMUST00000168435 ScribQ80U72 1612 aa23.82■■□□□ 1.4
Usp35-202ENSMUST00000168435 Baz1aO88379 1555 aa23.77■■□□□ 1.4
Usp35-202ENSMUST00000168435 Plekhg3Q4VAC9 1341 aa23.65■■□□□ 1.38
Usp35-202ENSMUST00000168435 Mier1Q5UAK0 511 aa23.61■■□□□ 1.37
Usp35-202ENSMUST00000168435 Brd4Q9ESU6 1400 aaKnown RBP23.59■■□□□ 1.37
Usp35-202ENSMUST00000168435 NefmP08553 848 aa23.57■■□□□ 1.36
Usp35-202ENSMUST00000168435 Lmod2Q3UHZ5 550 aa23.47■■□□□ 1.35
Usp35-202ENSMUST00000168435 Fam50aQ9WV03 339 aaKnown RBP23.47■■□□□ 1.35
Usp35-202ENSMUST00000168435 Cep164Q5DU05 1446 aa23.42■■□□□ 1.34
Usp35-202ENSMUST00000168435 Neurod1Q60867 357 aa23.42■■□□□ 1.34
Usp35-202ENSMUST00000168435 Rsf1E9PWW9 1441 aaKnown RBP23.37■■□□□ 1.33
Usp35-202ENSMUST00000168435 Npm1Q61937 292 aaKnown RBP23.33■■□□□ 1.33
Usp35-202ENSMUST00000168435 Cecr2E9Q2Z1 1453 aa23.31■■□□□ 1.32
Usp35-202ENSMUST00000168435 Eid3Q3V124 375 aa23.26■■□□□ 1.31
Usp35-202ENSMUST00000168435 Sall2Q9QX96 1004 aa23.24■■□□□ 1.31
Usp35-202ENSMUST00000168435 Ccdc88bQ4QRL3 1481 aa23.22■■□□□ 1.31
Usp35-202ENSMUST00000168435 Sycp2Q9CUU3 1500 aa23.19■■□□□ 1.3
Usp35-202ENSMUST00000168435 Ubl4bQ9CQ84 188 aa23.18■■□□□ 1.3
Usp35-202ENSMUST00000168435 Cdk11bP24788 784 aaKnown RBP23.17■■□□□ 1.3
Usp35-202ENSMUST00000168435 Golga3P55937 1487 aa23.14■■□□□ 1.29
Usp35-202ENSMUST00000168435 Nop58Q6DFW4 536 aaKnown RBP23.12■■□□□ 1.29
Usp35-202ENSMUST00000168435 Slc24a1Q91WD8 1130 aa23.11■■□□□ 1.29
Usp35-202ENSMUST00000168435 Mapk8ip2Q9ERE9 830 aa23.09■■□□□ 1.29
Usp35-202ENSMUST00000168435 Gm38655A0A286YDK6 273 aa23.09■■□□□ 1.29
Usp35-202ENSMUST00000168435 Clip1Q922J3 1391 aa23.03■■□□□ 1.28
Usp35-202ENSMUST00000168435 Zbtb7cQ8VCZ7 619 aa23.01■■□□□ 1.27
Usp35-202ENSMUST00000168435 CenpbP27790 599 aa22.95■■□□□ 1.26
Usp35-202ENSMUST00000168435 Csrnp3P59055 597 aa22.93■■□□□ 1.26
Usp35-202ENSMUST00000168435 Fkbp15Q6P9Q6 1216 aaKnown RBP22.92■■□□□ 1.26
Usp35-202ENSMUST00000168435 Kif15Q6P9L6 1387 aa22.9■■□□□ 1.26
Usp35-202ENSMUST00000168435 TonslQ6NZL6 1363 aa22.89■■□□□ 1.26
Usp35-202ENSMUST00000168435 NclP09405 707 aaKnown RBP22.89■■□□□ 1.25
Usp35-202ENSMUST00000168435 Ifnlr1Q8CGK5 535 aa22.89■■□□□ 1.25
Usp35-202ENSMUST00000168435 Smarca2Q6DIC0 1577 aa22.88■■□□□ 1.25
Usp35-202ENSMUST00000168435 CftrP26361 1476 aa22.78■■□□□ 1.24
Usp35-202ENSMUST00000168435 Synj1Q8CHC4 1574 aa22.78■■□□□ 1.24
Usp35-202ENSMUST00000168435 Aebp2Q9Z248 504 aaKnown RBP22.77■■□□□ 1.24
Usp35-202ENSMUST00000168435 Chic2Q9D9G3 165 aa22.7■■□□□ 1.22
Usp35-202ENSMUST00000168435 Zbtb4Q5F293 982 aa22.66■■□□□ 1.22
Usp35-202ENSMUST00000168435 Crybg2B7ZCC2 1516 aa22.63■■□□□ 1.21
Usp35-202ENSMUST00000168435 ClspnQ80YR7 1315 aa22.62■■□□□ 1.21
Usp35-202ENSMUST00000168435 Setd5Q5XJV7 1441 aa22.61■■□□□ 1.21
Usp35-202ENSMUST00000168435 BlmO88700 1416 aa22.6■■□□□ 1.21
Usp35-202ENSMUST00000168435 Anks4bQ8K3X6 423 aa22.55■■□□□ 1.2
Usp35-202ENSMUST00000168435 1700123L14RikQ3V2K7 440 aa22.53■■□□□ 1.2
Usp35-202ENSMUST00000168435 Hnrnpul2Q00PI9 745 aaKnown RBP22.47■■□□□ 1.19
Usp35-202ENSMUST00000168435 Ercc6F8VPZ5 1481 aa22.45■■□□□ 1.18
Usp35-202ENSMUST00000168435 Eif5bQ05D44 1216 aaKnown RBP22.43■■□□□ 1.18
Usp35-202ENSMUST00000168435 Pds5bQ4VA53 1446 aaKnown RBP22.42■■□□□ 1.18
Usp35-202ENSMUST00000168435 Cep162Q6ZQ06 1403 aa22.42■■□□□ 1.18
Usp35-202ENSMUST00000168435 Rapgef2Q8CHG7 1496 aa22.39■■□□□ 1.17
Usp35-202ENSMUST00000168435 BicraF8VPZ9 1578 aa22.36■■□□□ 1.17
Usp35-202ENSMUST00000168435 Fmn1Q05860 1466 aa22.33■■□□□ 1.17
Usp35-202ENSMUST00000168435 Smarca4Q3TKT4 1613 aaKnown RBP22.32■■□□□ 1.16
Usp35-202ENSMUST00000168435 Ttbk1Q6PCN3 1308 aa22.28■■□□□ 1.16
Usp35-202ENSMUST00000168435 Ccdc18Q640L5 1455 aa22.27■■□□□ 1.16
Usp35-202ENSMUST00000168435 Eea1Q8BL66 1411 aa22.26■■□□□ 1.15
Usp35-202ENSMUST00000168435 Atad2bE9Q166 1460 aaKnown RBP22.25■■□□□ 1.15
Usp35-202ENSMUST00000168435 Stra8P70278 393 aa22.23■■□□□ 1.15
Usp35-202ENSMUST00000168435 Os9Q8K2C7 672 aa22.23■■□□□ 1.15
Usp35-202ENSMUST00000168435 Prdm10Q3UTQ7 1184 aa22.22■■□□□ 1.15
Usp35-202ENSMUST00000168435 Arhgap27A2AB59 869 aa22.22■■□□□ 1.15
Usp35-202ENSMUST00000168435 Cux2P70298 1426 aa22.21■■□□□ 1.15
Usp35-202ENSMUST00000168435 Erich6D3Z6S9 713 aa22.19■■□□□ 1.14
Usp35-202ENSMUST00000168435 Pelp1Q9DBD5 1123 aaKnown RBP22.19■■□□□ 1.14
Usp35-202ENSMUST00000168435 Iqgap2Q3UQ44 1575 aa22.17■■□□□ 1.14
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms