RNA–Protein interactions for RNA: ENSMUST00000164243.1

Srp54b-201, Transcript of Signal recognition particle 54 kDa protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Srp54b, Length 2,317 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54b-201ENSMUST00000164243 Gm35339A0A140LHH9 1649 aa17.63■□□□□ 0.41
Srp54b-201ENSMUST00000164243 NischQ80TM9 1593 aa17.25■□□□□ 0.35
Srp54b-201ENSMUST00000164243 Abcc8B2RUS7 1588 aa16.77■□□□□ 0.28
Srp54b-201ENSMUST00000164243 Abcc9P70170 1546 aa16.68■□□□□ 0.26
Srp54b-201ENSMUST00000164243 ScribQ80U72 1612 aa16.26■□□□□ 0.19
Srp54b-201ENSMUST00000164243 NacadQ5SWP3 1504 aa15.78■□□□□ 0.12
Srp54b-201ENSMUST00000164243 Kdm5dQ62240 1548 aa15.68■□□□□ 0.1
Srp54b-201ENSMUST00000164243 Rpgrip1Q9EPQ2 1331 aa15.66■□□□□ 0.1
Srp54b-201ENSMUST00000164243 Sycp2Q9CUU3 1500 aa15.47■□□□□ 0.07
Srp54b-201ENSMUST00000164243 Dcaf1Q80TR8 1506 aa15.44■□□□□ 0.06
Srp54b-201ENSMUST00000164243 BicraF8VPZ9 1578 aa15.26■□□□□ 0.03
Srp54b-201ENSMUST00000164243 Dnajc5bQ9CQ94 199 aa15.12■□□□□ 0.01
Srp54b-201ENSMUST00000164243 Chic1Q8CBW7 227 aa15.05■□□□□ 0
Srp54b-201ENSMUST00000164243 Pcgf6Q99NA9 353 aa15.03■□□□□ -0
Srp54b-201ENSMUST00000164243 Rb1cc1Q9ESK9 1588 aa14.99□□□□□ -0.01
Srp54b-201ENSMUST00000164243 Pds5bQ4VA53 1446 aaKnown RBP14.94□□□□□ -0.02
Srp54b-201ENSMUST00000164243 Acin1Q9JIX8 1338 aaKnown RBP14.89□□□□□ -0.03
Srp54b-201ENSMUST00000164243 Crybg2B7ZCC2 1516 aa14.88□□□□□ -0.03
Srp54b-201ENSMUST00000164243 Thoc2B1AZI6 1594 aaKnown RBP14.87□□□□□ -0.03
Srp54b-201ENSMUST00000164243 Rtl1Q7M732 1744 aa14.86□□□□□ -0.03
Srp54b-201ENSMUST00000164243 Ccdc180J3QNE4 1664 aa14.83□□□□□ -0.04
Srp54b-201ENSMUST00000164243 Baz1aO88379 1555 aa14.8□□□□□ -0.04
Srp54b-201ENSMUST00000164243 Atad2bE9Q166 1460 aaKnown RBP14.75□□□□□ -0.05
Srp54b-201ENSMUST00000164243 Rhox8Q6VSS7 320 aa14.64□□□□□ -0.07
Srp54b-201ENSMUST00000164243 Myt1Q8CFC2 1127 aa14.61□□□□□ -0.07
Srp54b-201ENSMUST00000164243 Cc2d2aQ8CFW7 1633 aa14.57□□□□□ -0.08
Srp54b-201ENSMUST00000164243 Ercc6F8VPZ5 1481 aa14.57□□□□□ -0.08
Srp54b-201ENSMUST00000164243 Zcchc6Q5BLK4 1491 aaKnown RBP14.56□□□□□ -0.08
Srp54b-201ENSMUST00000164243 Las1lA2BE28 776 aaKnown RBP14.52□□□□□ -0.08
Srp54b-201ENSMUST00000164243 Smarca2Q6DIC0 1577 aa14.52□□□□□ -0.08
Srp54b-201ENSMUST00000164243 Fam135aQ6NS59 1506 aa14.5□□□□□ -0.09
Srp54b-201ENSMUST00000164243 Smarca4Q3TKT4 1613 aaKnown RBP14.5□□□□□ -0.09
Srp54b-201ENSMUST00000164243 Baz1bQ9Z277 1479 aa14.45□□□□□ -0.1
Srp54b-201ENSMUST00000164243 Neurod1Q60867 357 aa14.44□□□□□ -0.1
Srp54b-201ENSMUST00000164243 DiexfQ8BTT6 772 aaKnown RBP14.44□□□□□ -0.1
Srp54b-201ENSMUST00000164243 Iqgap2Q3UQ44 1575 aa14.44□□□□□ -0.1
Srp54b-201ENSMUST00000164243 CenpbP27790 599 aa14.43□□□□□ -0.1
Srp54b-201ENSMUST00000164243 Wdr62Q3U3T8 1523 aa14.37□□□□□ -0.11
Srp54b-201ENSMUST00000164243 Trim41Q5NCC3 630 aa14.36□□□□□ -0.11
Srp54b-201ENSMUST00000164243 Cecr2E9Q2Z1 1453 aa14.36□□□□□ -0.11
Srp54b-201ENSMUST00000164243 Phldb1Q6PDH0 1371 aaKnown RBP14.36□□□□□ -0.11
Srp54b-201ENSMUST00000164243 Frmpd1A2AKB4 1549 aa14.35□□□□□ -0.11
Srp54b-201ENSMUST00000164243 1700123L14RikQ3V2K7 440 aa14.29□□□□□ -0.12
Srp54b-201ENSMUST00000164243 Supt5hO55201 1082 aaKnown RBP14.25□□□□□ -0.13
Srp54b-201ENSMUST00000164243 Ubl4bQ9CQ84 188 aa14.18□□□□□ -0.14
Srp54b-201ENSMUST00000164243 Mapk8ip2Q9ERE9 830 aa14.18□□□□□ -0.14
Srp54b-201ENSMUST00000164243 Bcl11aQ9QYE3 773 aa14.15□□□□□ -0.14
Srp54b-201ENSMUST00000164243 Plppr3Q7TPB0 716 aa14.14□□□□□ -0.15
Srp54b-201ENSMUST00000164243 Mrc2Q64449 1479 aa14.14□□□□□ -0.15
Srp54b-201ENSMUST00000164243 Unc13aQ4KUS2 1712 aa14.09□□□□□ -0.15
Srp54b-201ENSMUST00000164243 CftrP26361 1476 aa14.03□□□□□ -0.16
Srp54b-201ENSMUST00000164243 Cttnbp2B9EJA2 1648 aa14□□□□□ -0.17
Srp54b-201ENSMUST00000164243 Ehmt2Q9Z148 1263 aaKnown RBP14□□□□□ -0.17
Srp54b-201ENSMUST00000164243 Dnajc5P60904 198 aa13.99□□□□□ -0.17
Srp54b-201ENSMUST00000164243 Phf23Q8BSN5 401 aa13.99□□□□□ -0.17
Srp54b-201ENSMUST00000164243 Anks4bQ8K3X6 423 aa13.98□□□□□ -0.17
Srp54b-201ENSMUST00000164243 Kcna4Q61423 654 aa13.96□□□□□ -0.17
Srp54b-201ENSMUST00000164243 Csrnp3P59055 597 aa13.96□□□□□ -0.18
Srp54b-201ENSMUST00000164243 HrcG5E8J6 738 aa13.95□□□□□ -0.18
Srp54b-201ENSMUST00000164243 Brd4Q9ESU6 1400 aaKnown RBP13.94□□□□□ -0.18
Srp54b-201ENSMUST00000164243 Aplp2Q06335 707 aa13.93□□□□□ -0.18
Srp54b-201ENSMUST00000164243 Synj1Q8CHC4 1574 aa13.93□□□□□ -0.18
Srp54b-201ENSMUST00000164243 Ube2uB1AUC4 352 aa13.81□□□□□ -0.2
Srp54b-201ENSMUST00000164243 Rsf1E9PWW9 1441 aaKnown RBP13.81□□□□□ -0.2
Srp54b-201ENSMUST00000164243 Lrriq1Q0P5X1 1673 aa13.8□□□□□ -0.2
Srp54b-201ENSMUST00000164243 Cux2P70298 1426 aa13.78□□□□□ -0.2
Srp54b-201ENSMUST00000164243 PrkcshO08795 521 aa13.78□□□□□ -0.2
Srp54b-201ENSMUST00000164243 Kif15Q6P9L6 1387 aa13.73□□□□□ -0.21
Srp54b-201ENSMUST00000164243 Amer1Q7TS75 1132 aa13.7□□□□□ -0.22
Srp54b-201ENSMUST00000164243 Kif21aQ9QXL2 1672 aa13.69□□□□□ -0.22
Srp54b-201ENSMUST00000164243 Esf1Q3V1V3 845 aaKnown RBP13.68□□□□□ -0.22
Srp54b-201ENSMUST00000164243 Lamc3Q9R0B6 1581 aa13.68□□□□□ -0.22
Srp54b-201ENSMUST00000164243 Ccdc136Q3TVA9 1136 aa13.68□□□□□ -0.22
Srp54b-201ENSMUST00000164243 Shroom2A2ALU4 1481 aa13.65□□□□□ -0.22
Srp54b-201ENSMUST00000164243 Eif4g3Q80XI3 1579 aaKnown RBP13.64□□□□□ -0.23
Srp54b-201ENSMUST00000164243 Npm1Q61937 292 aaKnown RBP13.62□□□□□ -0.23
Srp54b-201ENSMUST00000164243 Cngb1E1AZ71 1325 aa13.59□□□□□ -0.23
Srp54b-201ENSMUST00000164243 Cep164Q5DU05 1446 aa13.59□□□□□ -0.23
Srp54b-201ENSMUST00000164243 Sall2Q9QX96 1004 aa13.56□□□□□ -0.24
Srp54b-201ENSMUST00000164243 Urb2E9Q7L1 1524 aaKnown RBP13.51□□□□□ -0.25
Srp54b-201ENSMUST00000164243 Dhx29Q6PGC1 1365 aaKnown RBP13.49□□□□□ -0.25
Srp54b-201ENSMUST00000164243 Col17a1Q07563 1470 aa13.48□□□□□ -0.25
Srp54b-201ENSMUST00000164243 Plb1Q3TTY0 1478 aa13.47□□□□□ -0.25
Srp54b-201ENSMUST00000164243 Zeb1Q64318 1117 aa13.47□□□□□ -0.25
Srp54b-201ENSMUST00000164243 Ccdc18Q640L5 1455 aa13.46□□□□□ -0.25
Srp54b-201ENSMUST00000164243 TnnQ80Z71 1560 aa13.46□□□□□ -0.25
Srp54b-201ENSMUST00000164243 Gab3Q8BSM5 595 aa13.46□□□□□ -0.26
Srp54b-201ENSMUST00000164243 Ifnlr1Q8CGK5 535 aa13.45□□□□□ -0.26
Srp54b-201ENSMUST00000164243 LrpprcQ6PB66 1392 aaKnown RBP13.44□□□□□ -0.26
Srp54b-201ENSMUST00000164243 Pabpn1Q8CCS6 302 aaKnown RBP13.44□□□□□ -0.26
Srp54b-201ENSMUST00000164243 Crocc2F6XLV1 1638 aa13.4□□□□□ -0.26
Srp54b-201ENSMUST00000164243 Top2bQ64511 1612 aa13.4□□□□□ -0.26
Srp54b-201ENSMUST00000164243 Gm38655A0A286YDK6 273 aa13.39□□□□□ -0.27
Srp54b-201ENSMUST00000164243 Fam71e1A1L3C1 212 aa13.39□□□□□ -0.27
Srp54b-201ENSMUST00000164243 Ift140E9PY46 1464 aa13.39□□□□□ -0.27
Srp54b-201ENSMUST00000164243 Camsap1A2AHC3 1581 aa13.38□□□□□ -0.27
Srp54b-201ENSMUST00000164243 Cdk11bP24788 784 aaKnown RBP13.37□□□□□ -0.27
Srp54b-201ENSMUST00000164243 NefmP08553 848 aa13.36□□□□□ -0.27
Srp54b-201ENSMUST00000164243 Rusc2Q80U22 1514 aa13.36□□□□□ -0.27
Srp54b-201ENSMUST00000164243 Golga3P55937 1487 aa13.35□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 53.1 ms