RNA–Protein interactions for RNA: ENSMUST00000163709.7

Sp1-202, Transcript of Transcription factor Sp1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sp1, Length 3,134 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1-202ENSMUST00000163709 NischQ80TM9 1593 aa16.83■□□□□ 0.28
Sp1-202ENSMUST00000163709 Rhox8Q6VSS7 320 aa16.34■□□□□ 0.21
Sp1-202ENSMUST00000163709 Gm35339A0A140LHH9 1649 aa16.18■□□□□ 0.18
Sp1-202ENSMUST00000163709 Abcc9P70170 1546 aa16.18■□□□□ 0.18
Sp1-202ENSMUST00000163709 Abcc8B2RUS7 1588 aa15.88■□□□□ 0.13
Sp1-202ENSMUST00000163709 Ccdc136Q3TVA9 1136 aa15.21■□□□□ 0.03
Sp1-202ENSMUST00000163709 Ehmt2Q9Z148 1263 aaKnown RBP15.1■□□□□ 0.01
Sp1-202ENSMUST00000163709 Rtl1Q7M732 1744 aa14.95□□□□□ -0.02
Sp1-202ENSMUST00000163709 ScribQ80U72 1612 aa14.93□□□□□ -0.02
Sp1-202ENSMUST00000163709 Ccdc180J3QNE4 1664 aa14.91□□□□□ -0.02
Sp1-202ENSMUST00000163709 Zcchc6Q5BLK4 1491 aaKnown RBP14.77□□□□□ -0.04
Sp1-202ENSMUST00000163709 Rb1cc1Q9ESK9 1588 aa14.77□□□□□ -0.05
Sp1-202ENSMUST00000163709 Kdm5dQ62240 1548 aa14.64□□□□□ -0.07
Sp1-202ENSMUST00000163709 Trim41Q5NCC3 630 aa14.6□□□□□ -0.07
Sp1-202ENSMUST00000163709 Dcaf1Q80TR8 1506 aa14.54□□□□□ -0.08
Sp1-202ENSMUST00000163709 Cngb1E1AZ71 1325 aa14.49□□□□□ -0.09
Sp1-202ENSMUST00000163709 Gab3Q8BSM5 595 aa14.46□□□□□ -0.09
Sp1-202ENSMUST00000163709 Baz1aO88379 1555 aa14.46□□□□□ -0.09
Sp1-202ENSMUST00000163709 NacadQ5SWP3 1504 aa14.46□□□□□ -0.1
Sp1-202ENSMUST00000163709 Rpgrip1Q9EPQ2 1331 aa14.43□□□□□ -0.1
Sp1-202ENSMUST00000163709 HrcG5E8J6 738 aa14.4□□□□□ -0.1
Sp1-202ENSMUST00000163709 Acin1Q9JIX8 1338 aaKnown RBP14.3□□□□□ -0.12
Sp1-202ENSMUST00000163709 Chic1Q8CBW7 227 aa14.28□□□□□ -0.12
Sp1-202ENSMUST00000163709 Esf1Q3V1V3 845 aaKnown RBP14.23□□□□□ -0.13
Sp1-202ENSMUST00000163709 Sycp2Q9CUU3 1500 aa14.18□□□□□ -0.14
Sp1-202ENSMUST00000163709 Cecr2E9Q2Z1 1453 aa14.12□□□□□ -0.15
Sp1-202ENSMUST00000163709 Smarca2Q6DIC0 1577 aa14.11□□□□□ -0.15
Sp1-202ENSMUST00000163709 Rsf1E9PWW9 1441 aaKnown RBP14.05□□□□□ -0.16
Sp1-202ENSMUST00000163709 BicraF8VPZ9 1578 aa14.01□□□□□ -0.17
Sp1-202ENSMUST00000163709 Cep164Q5DU05 1446 aa14□□□□□ -0.17
Sp1-202ENSMUST00000163709 Ccdc88bQ4QRL3 1481 aa13.98□□□□□ -0.17
Sp1-202ENSMUST00000163709 Dnajc5bQ9CQ94 199 aa13.95□□□□□ -0.18
Sp1-202ENSMUST00000163709 Zeb1Q64318 1117 aa13.92□□□□□ -0.18
Sp1-202ENSMUST00000163709 Myt1lP97500 1187 aa13.91□□□□□ -0.18
Sp1-202ENSMUST00000163709 Brd4Q9ESU6 1400 aaKnown RBP13.91□□□□□ -0.18
Sp1-202ENSMUST00000163709 Pcgf6Q99NA9 353 aa13.89□□□□□ -0.19
Sp1-202ENSMUST00000163709 Crybg2B7ZCC2 1516 aa13.89□□□□□ -0.19
Sp1-202ENSMUST00000163709 Synj1Q8CHC4 1574 aa13.88□□□□□ -0.19
Sp1-202ENSMUST00000163709 Supt5hO55201 1082 aaKnown RBP13.83□□□□□ -0.2
Sp1-202ENSMUST00000163709 UbtfP25976 765 aaKnown RBP13.81□□□□□ -0.2
Sp1-202ENSMUST00000163709 Golga3P55937 1487 aa13.8□□□□□ -0.2
Sp1-202ENSMUST00000163709 Mier1Q5UAK0 511 aa13.76□□□□□ -0.21
Sp1-202ENSMUST00000163709 CftrP26361 1476 aa13.73□□□□□ -0.21
Sp1-202ENSMUST00000163709 Npm2Q80W85 207 aa13.73□□□□□ -0.21
Sp1-202ENSMUST00000163709 Thoc2B1AZI6 1594 aaKnown RBP13.72□□□□□ -0.21
Sp1-202ENSMUST00000163709 Il27Q8K3I6 234 aa13.72□□□□□ -0.21
Sp1-202ENSMUST00000163709 Pds5bQ4VA53 1446 aaKnown RBP13.71□□□□□ -0.21
Sp1-202ENSMUST00000163709 Ppargc1bQ8VHJ7 1014 aa13.7□□□□□ -0.22
Sp1-202ENSMUST00000163709 Ap3b1Q9Z1T1 1105 aa13.6□□□□□ -0.23
Sp1-202ENSMUST00000163709 Cc2d2aQ8CFW7 1633 aa13.59□□□□□ -0.23
Sp1-202ENSMUST00000163709 Plekhg3Q4VAC9 1341 aa13.59□□□□□ -0.23
Sp1-202ENSMUST00000163709 Ube2uB1AUC4 352 aa13.57□□□□□ -0.24
Sp1-202ENSMUST00000163709 Atad2bE9Q166 1460 aaKnown RBP13.51□□□□□ -0.25
Sp1-202ENSMUST00000163709 Wdr66E9Q743 1299 aa13.51□□□□□ -0.25
Sp1-202ENSMUST00000163709 Smarca4Q3TKT4 1613 aaKnown RBP13.5□□□□□ -0.25
Sp1-202ENSMUST00000163709 Cttnbp2B9EJA2 1648 aa13.49□□□□□ -0.25
Sp1-202ENSMUST00000163709 Sall2Q9QX96 1004 aa13.46□□□□□ -0.25
Sp1-202ENSMUST00000163709 Top2bQ64511 1612 aa13.45□□□□□ -0.26
Sp1-202ENSMUST00000163709 Rapgef2Q8CHG7 1496 aa13.44□□□□□ -0.26
Sp1-202ENSMUST00000163709 NefmP08553 848 aa13.42□□□□□ -0.26
Sp1-202ENSMUST00000163709 Iqgap2Q3UQ44 1575 aa13.4□□□□□ -0.26
Sp1-202ENSMUST00000163709 Aebp2Q9Z248 504 aaKnown RBP13.39□□□□□ -0.27
Sp1-202ENSMUST00000163709 Ercc6F8VPZ5 1481 aa13.38□□□□□ -0.27
Sp1-202ENSMUST00000163709 Neurod1Q60867 357 aa13.37□□□□□ -0.27
Sp1-202ENSMUST00000163709 Cep162Q6ZQ06 1403 aa13.36□□□□□ -0.27
Sp1-202ENSMUST00000163709 Fam135aQ6NS59 1506 aa13.36□□□□□ -0.27
Sp1-202ENSMUST00000163709 Fmn1Q05860 1466 aa13.36□□□□□ -0.27
Sp1-202ENSMUST00000163709 DiexfQ8BTT6 772 aaKnown RBP13.35□□□□□ -0.27
Sp1-202ENSMUST00000163709 Eid3Q3V124 375 aa13.35□□□□□ -0.27
Sp1-202ENSMUST00000163709 Clip1Q922J3 1391 aa13.34□□□□□ -0.27
Sp1-202ENSMUST00000163709 Baz1bQ9Z277 1479 aa13.32□□□□□ -0.28
Sp1-202ENSMUST00000163709 Las1lA2BE28 776 aaKnown RBP13.3□□□□□ -0.28
Sp1-202ENSMUST00000163709 Kif15Q6P9L6 1387 aa13.28□□□□□ -0.28
Sp1-202ENSMUST00000163709 Top2aQ01320 1528 aaKnown RBP13.28□□□□□ -0.28
Sp1-202ENSMUST00000163709 Lmod2Q3UHZ5 550 aa13.27□□□□□ -0.28
Sp1-202ENSMUST00000163709 PtprkP35822 1457 aa13.25□□□□□ -0.29
Sp1-202ENSMUST00000163709 Mapk8ip2Q9ERE9 830 aa13.21□□□□□ -0.3
Sp1-202ENSMUST00000163709 Wdr62Q3U3T8 1523 aa13.19□□□□□ -0.3
Sp1-202ENSMUST00000163709 Frmpd1A2AKB4 1549 aa13.18□□□□□ -0.3
Sp1-202ENSMUST00000163709 Fam50aQ9WV03 339 aaKnown RBP13.18□□□□□ -0.3
Sp1-202ENSMUST00000163709 TonslQ6NZL6 1363 aa13.16□□□□□ -0.3
Sp1-202ENSMUST00000163709 Phldb1Q6PDH0 1371 aaKnown RBP13.16□□□□□ -0.3
Sp1-202ENSMUST00000163709 Ubl4bQ9CQ84 188 aa13.15□□□□□ -0.3
Sp1-202ENSMUST00000163709 Myt1Q8CFC2 1127 aa13.13□□□□□ -0.31
Sp1-202ENSMUST00000163709 Setd5Q5XJV7 1441 aa13.12□□□□□ -0.31
Sp1-202ENSMUST00000163709 Npm1Q61937 292 aaKnown RBP13.11□□□□□ -0.31
Sp1-202ENSMUST00000163709 Arhgap35Q91YM2 1499 aa13.1□□□□□ -0.31
Sp1-202ENSMUST00000163709 CatipB9EKE5 520 aa13.08□□□□□ -0.32
Sp1-202ENSMUST00000163709 Arap1Q4LDD4 1452 aa13.04□□□□□ -0.32
Sp1-202ENSMUST00000163709 Gm38655A0A286YDK6 273 aa13.04□□□□□ -0.32
Sp1-202ENSMUST00000163709 BlmO88700 1416 aa13.04□□□□□ -0.32
Sp1-202ENSMUST00000163709 Eea1Q8BL66 1411 aa13.03□□□□□ -0.32
Sp1-202ENSMUST00000163709 Dnajc5P60904 198 aa13.02□□□□□ -0.33
Sp1-202ENSMUST00000163709 Nop58Q6DFW4 536 aaKnown RBP13.02□□□□□ -0.33
Sp1-202ENSMUST00000163709 ClspnQ80YR7 1315 aa13□□□□□ -0.33
Sp1-202ENSMUST00000163709 Mrc2Q64449 1479 aa13□□□□□ -0.33
Sp1-202ENSMUST00000163709 Cux2P70298 1426 aa13□□□□□ -0.33
Sp1-202ENSMUST00000163709 Csrnp3P59055 597 aa12.99□□□□□ -0.33
Sp1-202ENSMUST00000163709 AqrQ8CFQ3 1481 aaKnown RBP12.97□□□□□ -0.33
Sp1-202ENSMUST00000163709 Cdk11bP24788 784 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms