RNA–Protein interactions for RNA: ENSMUST00000156947.1

Gm11840-201, mousemouse

TSL 1 (best) BASIC

Gene Gm11840, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11840-201ENSMUST00000156947 Mapk8ip2Q9ERE9 830 aa25.68■■□□□ 1.7
Gm11840-201ENSMUST00000156947 Chic1Q8CBW7 227 aa24.36■■□□□ 1.49
Gm11840-201ENSMUST00000156947 Phf23Q8BSN5 401 aa21.75■■□□□ 1.07
Gm11840-201ENSMUST00000156947 Gab3Q8BSM5 595 aa20.22■□□□□ 0.83
Gm11840-201ENSMUST00000156947 Plppr3Q7TPB0 716 aa19.91■□□□□ 0.78
Gm11840-201ENSMUST00000156947 Fam163aQ8CAA5 168 aa19.75■□□□□ 0.75
Gm11840-201ENSMUST00000156947 Senp3Q9EP97 568 aaKnown RBP19.24■□□□□ 0.67
Gm11840-201ENSMUST00000156947 GapdhsQ64467 440 aa18.53■□□□□ 0.56
Gm11840-201ENSMUST00000156947 Kcna4Q61423 654 aa17.85■□□□□ 0.45
Gm11840-201ENSMUST00000156947 ArsiQ32KI9 573 aa17.79■□□□□ 0.44
Gm11840-201ENSMUST00000156947 Hoxd11P23813 323 aa17.58■□□□□ 0.4
Gm11840-201ENSMUST00000156947 Slc34a2Q9DBP0 697 aa17.45■□□□□ 0.38
Gm11840-201ENSMUST00000156947 Znf219Q6IQX8 726 aa17.18■□□□□ 0.34
Gm11840-201ENSMUST00000156947 Trap1aP19473 224 aa16.87■□□□□ 0.29
Gm11840-201ENSMUST00000156947 Dnajc5bQ9CQ94 199 aa16.63■□□□□ 0.25
Gm11840-201ENSMUST00000156947 Akt1s1Q9D1F4 257 aa16.38■□□□□ 0.21
Gm11840-201ENSMUST00000156947 Rsph4aQ8BYM7 716 aa16.25■□□□□ 0.19
Gm11840-201ENSMUST00000156947 Chrna2Q91X60 512 aa16.23■□□□□ 0.19
Gm11840-201ENSMUST00000156947 Rimbp2Q80U40 1072 aa16.14■□□□□ 0.17
Gm11840-201ENSMUST00000156947 Dmrt2Q8BG36 561 aa15.91■□□□□ 0.14
Gm11840-201ENSMUST00000156947 Znf704Q9ERQ3 566 aa15.9■□□□□ 0.14
Gm11840-201ENSMUST00000156947 Slc4a5E9Q3M5 1116 aa15.86■□□□□ 0.13
Gm11840-201ENSMUST00000156947 Cacnb1Q8R3Z5 597 aa15.61■□□□□ 0.09
Gm11840-201ENSMUST00000156947 Gm35339A0A140LHH9 1649 aa15.44■□□□□ 0.06
Gm11840-201ENSMUST00000156947 NischQ80TM9 1593 aa15.36■□□□□ 0.05
Gm11840-201ENSMUST00000156947 Atf5O70191 283 aa15.3■□□□□ 0.04
Gm11840-201ENSMUST00000156947 Ppargc1bQ8VHJ7 1014 aa15.3■□□□□ 0.04
Gm11840-201ENSMUST00000156947 Ppp4r2Q0VGB7 417 aa15.13■□□□□ 0.01
Gm11840-201ENSMUST00000156947 Hs6st3Q9QYK4 470 aa15.11■□□□□ 0.01
Gm11840-201ENSMUST00000156947 Ildr2B5TVM2 661 aa15.04■□□□□ -0
Gm11840-201ENSMUST00000156947 Znf703P0CL69 594 aa15.04■□□□□ -0
Gm11840-201ENSMUST00000156947 Slc4a1apE9PX68 744 aa15.03■□□□□ -0
Gm11840-201ENSMUST00000156947 Abcc8B2RUS7 1588 aa14.83□□□□□ -0.04
Gm11840-201ENSMUST00000156947 Abcc9P70170 1546 aa14.77□□□□□ -0.04
Gm11840-201ENSMUST00000156947 Bach1P97302 739 aa14.77□□□□□ -0.05
Gm11840-201ENSMUST00000156947 Sox12Q04890 314 aa14.77□□□□□ -0.05
Gm11840-201ENSMUST00000156947 1700123L14RikQ3V2K7 440 aa14.57□□□□□ -0.08
Gm11840-201ENSMUST00000156947 Prr29B1ARI9 187 aa14.54□□□□□ -0.08
Gm11840-201ENSMUST00000156947 Kcnn1Q9EQR3 537 aa14.47□□□□□ -0.09
Gm11840-201ENSMUST00000156947 Grwd1Q810D6 446 aaKnown RBP14.46□□□□□ -0.09
Gm11840-201ENSMUST00000156947 Egfem1Q8C088 590 aa14.44□□□□□ -0.1
Gm11840-201ENSMUST00000156947 Zbtb7aO88939 569 aaKnown RBP14.32□□□□□ -0.12
Gm11840-201ENSMUST00000156947 WdpcpQ8C456 722 aa14.32□□□□□ -0.12
Gm11840-201ENSMUST00000156947 ScribQ80U72 1612 aa14.26□□□□□ -0.13
Gm11840-201ENSMUST00000156947 Abcb7Q61102 752 aaKnown RBP14.02□□□□□ -0.17
Gm11840-201ENSMUST00000156947 NacadQ5SWP3 1504 aa14□□□□□ -0.17
Gm11840-201ENSMUST00000156947 Pip4p2Q9CZX7 257 aa13.99□□□□□ -0.17
Gm11840-201ENSMUST00000156947 Ifnlr1Q8CGK5 535 aa13.97□□□□□ -0.17
Gm11840-201ENSMUST00000156947 G430095P16RikE9Q913 147 aa13.92□□□□□ -0.18
Gm11840-201ENSMUST00000156947 Kdm5dQ62240 1548 aa13.87□□□□□ -0.19
Gm11840-201ENSMUST00000156947 Clcn6O35454 870 aa13.85□□□□□ -0.19
Gm11840-201ENSMUST00000156947 C1qtnf12Q8R2Z0 308 aa13.84□□□□□ -0.19
Gm11840-201ENSMUST00000156947 Rnf216P58283 853 aa13.82□□□□□ -0.2
Gm11840-201ENSMUST00000156947 Evx2P49749 475 aa13.75□□□□□ -0.21
Gm11840-201ENSMUST00000156947 Kank3Q9Z1P7 791 aa13.72□□□□□ -0.21
Gm11840-201ENSMUST00000156947 Nkx1-1G3UXB3 402 aa13.68□□□□□ -0.22
Gm11840-201ENSMUST00000156947 Sycp2Q9CUU3 1500 aa13.68□□□□□ -0.22
Gm11840-201ENSMUST00000156947 Dcaf1Q80TR8 1506 aa13.65□□□□□ -0.22
Gm11840-201ENSMUST00000156947 Cdca7Q9D0M2 382 aa13.64□□□□□ -0.23
Gm11840-201ENSMUST00000156947 Zbtb12Q9Z150 459 aa13.61□□□□□ -0.23
Gm11840-201ENSMUST00000156947 Ms4a5Q810P8 197 aa13.55□□□□□ -0.24
Gm11840-201ENSMUST00000156947 Gtpbp6Q3U6U5 514 aa13.53□□□□□ -0.24
Gm11840-201ENSMUST00000156947 Nlrp6Q91WS2 869 aa13.51□□□□□ -0.25
Gm11840-201ENSMUST00000156947 Foxp4Q9DBY0 795 aaKnown RBP13.49□□□□□ -0.25
Gm11840-201ENSMUST00000156947 Rhox8Q6VSS7 320 aa13.43□□□□□ -0.26
Gm11840-201ENSMUST00000156947 ArntlQ9WTL8 632 aa13.42□□□□□ -0.26
Gm11840-201ENSMUST00000156947 Riok3Q9DBU3 519 aaKnown RBP13.41□□□□□ -0.26
Gm11840-201ENSMUST00000156947 BicraF8VPZ9 1578 aa13.41□□□□□ -0.26
Gm11840-201ENSMUST00000156947 Fam71e1A1L3C1 212 aa13.39□□□□□ -0.27
Gm11840-201ENSMUST00000156947 Trim41Q5NCC3 630 aa13.37□□□□□ -0.27
Gm11840-201ENSMUST00000156947 Pitpnm1O35954 1243 aa13.36□□□□□ -0.27
Gm11840-201ENSMUST00000156947 Rb1cc1Q9ESK9 1588 aa13.35□□□□□ -0.27
Gm11840-201ENSMUST00000156947 Pds5bQ4VA53 1446 aaKnown RBP13.3□□□□□ -0.28
Gm11840-201ENSMUST00000156947 Npm2Q80W85 207 aa13.27□□□□□ -0.29
Gm11840-201ENSMUST00000156947 Trim35Q8C006 501 aa13.27□□□□□ -0.29
Gm11840-201ENSMUST00000156947 MyclP10166 368 aa13.24□□□□□ -0.29
Gm11840-201ENSMUST00000156947 Krtap4-1Q3UUY3 169 aa13.22□□□□□ -0.29
Gm11840-201ENSMUST00000156947 Crybg2B7ZCC2 1516 aa13.2□□□□□ -0.3
Gm11840-201ENSMUST00000156947 Baz1aO88379 1555 aa13.17□□□□□ -0.3
Gm11840-201ENSMUST00000156947 Zcchc6Q5BLK4 1491 aaKnown RBP13.11□□□□□ -0.31
Gm11840-201ENSMUST00000156947 AcrbpQ3V140 540 aa13.11□□□□□ -0.31
Gm11840-201ENSMUST00000156947 Fbln2P37889 1221 aa13.1□□□□□ -0.31
Gm11840-201ENSMUST00000156947 Atad2bE9Q166 1460 aaKnown RBP13.09□□□□□ -0.31
Gm11840-201ENSMUST00000156947 Pde4cQ3UEI1 686 aa13.08□□□□□ -0.32
Gm11840-201ENSMUST00000156947 Ccdc180J3QNE4 1664 aa13.07□□□□□ -0.32
Gm11840-201ENSMUST00000156947 Thoc2B1AZI6 1594 aaKnown RBP13.03□□□□□ -0.32
Gm11840-201ENSMUST00000156947 Lhx8O35652 367 aa13.02□□□□□ -0.33
Gm11840-201ENSMUST00000156947 Ercc6F8VPZ5 1481 aa13.02□□□□□ -0.33
Gm11840-201ENSMUST00000156947 Prm3Q62100 101 aa12.96□□□□□ -0.33
Gm11840-201ENSMUST00000156947 Npm3Q9CPP0 175 aaKnown RBP12.95□□□□□ -0.34
Gm11840-201ENSMUST00000156947 Fxr2Q9WVR4 673 aaKnown RBP12.9□□□□□ -0.34
Gm11840-201ENSMUST00000156947 Cc2d2aQ8CFW7 1633 aa12.88□□□□□ -0.35
Gm11840-201ENSMUST00000156947 Smarca2Q6DIC0 1577 aa12.87□□□□□ -0.35
Gm11840-201ENSMUST00000156947 MpndQ3TV65 487 aa12.87□□□□□ -0.35
Gm11840-201ENSMUST00000156947 Styxl1Q9DAR2 321 aa12.86□□□□□ -0.35
Gm11840-201ENSMUST00000156947 Smarca4Q3TKT4 1613 aaKnown RBP12.86□□□□□ -0.35
Gm11840-201ENSMUST00000156947 Skida1Q80YR3 822 aa12.82□□□□□ -0.36
Gm11840-201ENSMUST00000156947 Iqgap2Q3UQ44 1575 aa12.81□□□□□ -0.36
Gm11840-201ENSMUST00000156947 Phldb1Q6PDH0 1371 aaKnown RBP12.81□□□□□ -0.36
Gm11840-201ENSMUST00000156947 Ubl4bQ9CQ84 188 aa12.79□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 78.5 ms