RNA–Protein interactions for RNA: ENSMUST00000143453.1

5330413P13Rik-202, mousemouse

TSL 1 (best) BASIC

Gene 5330413P13Rik, Length 3,630 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
5330413P13Rik-202ENSMUST00000143453 Gm35339A0A140LHH9 1649 aa14.39□□□□□ -0.11
5330413P13Rik-202ENSMUST00000143453 Ube2uB1AUC4 352 aa13.83□□□□□ -0.2
5330413P13Rik-202ENSMUST00000143453 Rpgrip1Q9EPQ2 1331 aa13.7□□□□□ -0.22
5330413P13Rik-202ENSMUST00000143453 NischQ80TM9 1593 aa13.54□□□□□ -0.24
5330413P13Rik-202ENSMUST00000143453 Abcc9P70170 1546 aa13.44□□□□□ -0.26
5330413P13Rik-202ENSMUST00000143453 Pcgf6Q99NA9 353 aa13.29□□□□□ -0.28
5330413P13Rik-202ENSMUST00000143453 Acin1Q9JIX8 1338 aaKnown RBP13.27□□□□□ -0.29
5330413P13Rik-202ENSMUST00000143453 Ehmt2Q9Z148 1263 aaKnown RBP13.23□□□□□ -0.29
5330413P13Rik-202ENSMUST00000143453 Abcc8B2RUS7 1588 aa13.2□□□□□ -0.3
5330413P13Rik-202ENSMUST00000143453 Rhox8Q6VSS7 320 aa13.08□□□□□ -0.32
5330413P13Rik-202ENSMUST00000143453 DiexfQ8BTT6 772 aaKnown RBP13.06□□□□□ -0.32
5330413P13Rik-202ENSMUST00000143453 Neurod1Q60867 357 aa12.89□□□□□ -0.35
5330413P13Rik-202ENSMUST00000143453 Supt5hO55201 1082 aaKnown RBP12.89□□□□□ -0.35
5330413P13Rik-202ENSMUST00000143453 Ccdc180J3QNE4 1664 aa12.88□□□□□ -0.35
5330413P13Rik-202ENSMUST00000143453 Rtl1Q7M732 1744 aa12.84□□□□□ -0.35
5330413P13Rik-202ENSMUST00000143453 ScribQ80U72 1612 aa12.79□□□□□ -0.36
5330413P13Rik-202ENSMUST00000143453 Las1lA2BE28 776 aaKnown RBP12.75□□□□□ -0.37
5330413P13Rik-202ENSMUST00000143453 Ttbk1Q6PCN3 1308 aa12.71□□□□□ -0.37
5330413P13Rik-202ENSMUST00000143453 1700123L14RikQ3V2K7 440 aa12.64□□□□□ -0.39
5330413P13Rik-202ENSMUST00000143453 Trim41Q5NCC3 630 aa12.64□□□□□ -0.39
5330413P13Rik-202ENSMUST00000143453 CenpbP27790 599 aa12.57□□□□□ -0.4
5330413P13Rik-202ENSMUST00000143453 Chic1Q8CBW7 227 aa12.54□□□□□ -0.4
5330413P13Rik-202ENSMUST00000143453 Csrnp3P59055 597 aa12.53□□□□□ -0.4
5330413P13Rik-202ENSMUST00000143453 Zeb1Q64318 1117 aa12.5□□□□□ -0.41
5330413P13Rik-202ENSMUST00000143453 Dcaf1Q80TR8 1506 aa12.48□□□□□ -0.41
5330413P13Rik-202ENSMUST00000143453 CatipB9EKE5 520 aa12.48□□□□□ -0.41
5330413P13Rik-202ENSMUST00000143453 Myt1Q8CFC2 1127 aa12.42□□□□□ -0.42
5330413P13Rik-202ENSMUST00000143453 Cngb1E1AZ71 1325 aa12.38□□□□□ -0.43
5330413P13Rik-202ENSMUST00000143453 ArxO35085 564 aa12.34□□□□□ -0.43
5330413P13Rik-202ENSMUST00000143453 Anks4bQ8K3X6 423 aa12.33□□□□□ -0.44
5330413P13Rik-202ENSMUST00000143453 Gm38655A0A286YDK6 273 aa12.31□□□□□ -0.44
5330413P13Rik-202ENSMUST00000143453 Zcchc6Q5BLK4 1491 aaKnown RBP12.31□□□□□ -0.44
5330413P13Rik-202ENSMUST00000143453 Sall2Q9QX96 1004 aa12.29□□□□□ -0.44
5330413P13Rik-202ENSMUST00000143453 Bcl11aQ9QYE3 773 aa12.29□□□□□ -0.44
5330413P13Rik-202ENSMUST00000143453 Plppr3Q7TPB0 716 aa12.28□□□□□ -0.44
5330413P13Rik-202ENSMUST00000143453 HrcG5E8J6 738 aa12.25□□□□□ -0.45
5330413P13Rik-202ENSMUST00000143453 Aplp2Q06335 707 aa12.2□□□□□ -0.46
5330413P13Rik-202ENSMUST00000143453 Kdm5dQ62240 1548 aa12.11□□□□□ -0.47
5330413P13Rik-202ENSMUST00000143453 PrkcshO08795 521 aa12.08□□□□□ -0.48
5330413P13Rik-202ENSMUST00000143453 Wdr66E9Q743 1299 aa12.07□□□□□ -0.48
5330413P13Rik-202ENSMUST00000143453 Cdk11bP24788 784 aaKnown RBP12.06□□□□□ -0.48
5330413P13Rik-202ENSMUST00000143453 Ccdc136Q3TVA9 1136 aa12.06□□□□□ -0.48
5330413P13Rik-202ENSMUST00000143453 Ppargc1bQ8VHJ7 1014 aa12.04□□□□□ -0.48
5330413P13Rik-202ENSMUST00000143453 NefmP08553 848 aa12.03□□□□□ -0.48
5330413P13Rik-202ENSMUST00000143453 Nop58Q6DFW4 536 aaKnown RBP12.02□□□□□ -0.49
5330413P13Rik-202ENSMUST00000143453 Fam71e1A1L3C1 212 aa11.97□□□□□ -0.49
5330413P13Rik-202ENSMUST00000143453 Ifnlr1Q8CGK5 535 aa11.97□□□□□ -0.49
5330413P13Rik-202ENSMUST00000143453 Mier1Q5UAK0 511 aa11.97□□□□□ -0.49
5330413P13Rik-202ENSMUST00000143453 Mapk8ip2Q9ERE9 830 aa11.95□□□□□ -0.5
5330413P13Rik-202ENSMUST00000143453 Kcna4Q61423 654 aa11.94□□□□□ -0.5
5330413P13Rik-202ENSMUST00000143453 Aebp2Q9Z248 504 aaKnown RBP11.92□□□□□ -0.5
5330413P13Rik-202ENSMUST00000143453 NacadQ5SWP3 1504 aa11.89□□□□□ -0.51
5330413P13Rik-202ENSMUST00000143453 Rb1cc1Q9ESK9 1588 aa11.85□□□□□ -0.51
5330413P13Rik-202ENSMUST00000143453 BicraF8VPZ9 1578 aa11.84□□□□□ -0.51
5330413P13Rik-202ENSMUST00000143453 SafbD3YXK2 937 aaKnown RBP11.83□□□□□ -0.52
5330413P13Rik-202ENSMUST00000143453 Amer1Q7TS75 1132 aa11.83□□□□□ -0.52
5330413P13Rik-202ENSMUST00000143453 Sycp2Q9CUU3 1500 aa11.79□□□□□ -0.52
5330413P13Rik-202ENSMUST00000143453 Crybg2B7ZCC2 1516 aa11.79□□□□□ -0.52
5330413P13Rik-202ENSMUST00000143453 Baz1aO88379 1555 aa11.78□□□□□ -0.52
5330413P13Rik-202ENSMUST00000143453 Gab3Q8BSM5 595 aa11.77□□□□□ -0.53
5330413P13Rik-202ENSMUST00000143453 ClspnQ80YR7 1315 aa11.77□□□□□ -0.53
5330413P13Rik-202ENSMUST00000143453 Arid3aQ62431 601 aa11.76□□□□□ -0.53
5330413P13Rik-202ENSMUST00000143453 Hnrnpul2Q00PI9 745 aaKnown RBP11.72□□□□□ -0.53
5330413P13Rik-202ENSMUST00000143453 Cep164Q5DU05 1446 aa11.68□□□□□ -0.54
5330413P13Rik-202ENSMUST00000143453 Smarca2Q6DIC0 1577 aa11.66□□□□□ -0.54
5330413P13Rik-202ENSMUST00000143453 UbtfP25976 765 aaKnown RBP11.64□□□□□ -0.55
5330413P13Rik-202ENSMUST00000143453 Slc4a1apE9PX68 744 aa11.62□□□□□ -0.55
5330413P13Rik-202ENSMUST00000143453 Ap3b1Q9Z1T1 1105 aa11.61□□□□□ -0.55
5330413P13Rik-202ENSMUST00000143453 Prdm16A2A935 1275 aa11.6□□□□□ -0.55
5330413P13Rik-202ENSMUST00000143453 Taok2Q6ZQ29 1240 aa11.57□□□□□ -0.56
5330413P13Rik-202ENSMUST00000143453 Tnnt3Q9QZ47 272 aa11.54□□□□□ -0.56
5330413P13Rik-202ENSMUST00000143453 Anp32aO35381 247 aa11.54□□□□□ -0.56
5330413P13Rik-202ENSMUST00000143453 Hdac5Q9Z2V6 1113 aa11.52□□□□□ -0.56
5330413P13Rik-202ENSMUST00000143453 TonslQ6NZL6 1363 aa11.49□□□□□ -0.57
5330413P13Rik-202ENSMUST00000143453 Vsig10D3YX43 558 aa11.47□□□□□ -0.57
5330413P13Rik-202ENSMUST00000143453 Prdm10Q3UTQ7 1184 aa11.46□□□□□ -0.58
5330413P13Rik-202ENSMUST00000143453 Nolc1E9Q5C9 702 aaKnown RBP11.44□□□□□ -0.58
5330413P13Rik-202ENSMUST00000143453 Q8BT18 775 aa11.44□□□□□ -0.58
5330413P13Rik-202ENSMUST00000143453 Pelp1Q9DBD5 1123 aaKnown RBP11.44□□□□□ -0.58
5330413P13Rik-202ENSMUST00000143453 Rtl5Q5DTT4 599 aa11.43□□□□□ -0.58
5330413P13Rik-202ENSMUST00000143453 Phf23Q8BSN5 401 aa11.38□□□□□ -0.59
5330413P13Rik-202ENSMUST00000143453 Ncbp3Q8BZR9 615 aaKnown RBP11.37□□□□□ -0.59
5330413P13Rik-202ENSMUST00000143453 Rsf1E9PWW9 1441 aaKnown RBP11.36□□□□□ -0.59
5330413P13Rik-202ENSMUST00000143453 Il27Q8K3I6 234 aa11.36□□□□□ -0.59
5330413P13Rik-202ENSMUST00000143453 Supt16hQ920B9 1047 aa11.34□□□□□ -0.59
5330413P13Rik-202ENSMUST00000143453 Unc13aQ4KUS2 1712 aa11.32□□□□□ -0.6
5330413P13Rik-202ENSMUST00000143453 Pknox2Q8BG99 474 aa11.31□□□□□ -0.6
5330413P13Rik-202ENSMUST00000143453 Plcd4Q8K3R3 807 aa11.31□□□□□ -0.6
5330413P13Rik-202ENSMUST00000143453 Calr4Q3TQS0 420 aa11.3□□□□□ -0.6
5330413P13Rik-202ENSMUST00000143453 Fgd1P52734 960 aa11.3□□□□□ -0.6
5330413P13Rik-202ENSMUST00000143453 Gtf3c3Q3TMP1 882 aa11.28□□□□□ -0.6
5330413P13Rik-202ENSMUST00000143453 Znf710Q3U288 666 aa11.27□□□□□ -0.61
5330413P13Rik-202ENSMUST00000143453 Upf2A2AT37 1269 aaKnown RBP11.25□□□□□ -0.61
5330413P13Rik-202ENSMUST00000143453 Ppp4r2Q0VGB7 417 aa11.24□□□□□ -0.61
5330413P13Rik-202ENSMUST00000143453 Eid3Q3V124 375 aa11.22□□□□□ -0.61
5330413P13Rik-202ENSMUST00000143453 Rsph4aQ8BYM7 716 aa11.22□□□□□ -0.61
5330413P13Rik-202ENSMUST00000143453 Slc24a1Q91WD8 1130 aa11.22□□□□□ -0.61
5330413P13Rik-202ENSMUST00000143453 NrdcQ8BHG1 1161 aa11.2□□□□□ -0.62
5330413P13Rik-202ENSMUST00000143453 Ccdc88bQ4QRL3 1481 aa11.19□□□□□ -0.62
5330413P13Rik-202ENSMUST00000143453 Stra8P70278 393 aa11.18□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms