RNA–Protein interactions for RNA: ENSMUST00000130360.1

Synpo-206, Transcript of Synaptopodin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Synpo, Length 5,159 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Synpo-206ENSMUST00000130360 Rhox8Q6VSS7 320 aa28.75■■■□□ 2.19
Synpo-206ENSMUST00000130360 Rpgrip1Q9EPQ2 1331 aa27.38■■□□□ 1.97
Synpo-206ENSMUST00000130360 NischQ80TM9 1593 aa26.56■■□□□ 1.84
Synpo-206ENSMUST00000130360 Las1lA2BE28 776 aaKnown RBP26.03■■□□□ 1.76
Synpo-206ENSMUST00000130360 Ehmt2Q9Z148 1263 aaKnown RBP26.01■■□□□ 1.75
Synpo-206ENSMUST00000130360 Ccdc136Q3TVA9 1136 aa25.72■■□□□ 1.71
Synpo-206ENSMUST00000130360 Cngb1E1AZ71 1325 aa25.65■■□□□ 1.7
Synpo-206ENSMUST00000130360 Ccdc180J3QNE4 1664 aa25.48■■□□□ 1.67
Synpo-206ENSMUST00000130360 Trim41Q5NCC3 630 aa25.45■■□□□ 1.66
Synpo-206ENSMUST00000130360 Acin1Q9JIX8 1338 aaKnown RBP25.41■■□□□ 1.66
Synpo-206ENSMUST00000130360 Rtl1Q7M732 1744 aa25.41■■□□□ 1.66
Synpo-206ENSMUST00000130360 Wdr66E9Q743 1299 aa25.16■■□□□ 1.62
Synpo-206ENSMUST00000130360 Zeb1Q64318 1117 aa25.15■■□□□ 1.62
Synpo-206ENSMUST00000130360 Esf1Q3V1V3 845 aaKnown RBP25.14■■□□□ 1.62
Synpo-206ENSMUST00000130360 Abcc9P70170 1546 aa25.07■■□□□ 1.6
Synpo-206ENSMUST00000130360 HrcG5E8J6 738 aa25.07■■□□□ 1.6
Synpo-206ENSMUST00000130360 Gab3Q8BSM5 595 aa25.03■■□□□ 1.6
Synpo-206ENSMUST00000130360 Pelp1Q9DBD5 1123 aaKnown RBP24.93■■□□□ 1.58
Synpo-206ENSMUST00000130360 NefmP08553 848 aa24.85■■□□□ 1.57
Synpo-206ENSMUST00000130360 CenpbP27790 599 aa24.79■■□□□ 1.56
Synpo-206ENSMUST00000130360 Pcgf6Q99NA9 353 aa24.68■■□□□ 1.54
Synpo-206ENSMUST00000130360 Npm2Q80W85 207 aa24.62■■□□□ 1.53
Synpo-206ENSMUST00000130360 Myt1lP97500 1187 aa24.46■■□□□ 1.51
Synpo-206ENSMUST00000130360 Myt1Q8CFC2 1127 aa24.43■■□□□ 1.5
Synpo-206ENSMUST00000130360 Abcc8B2RUS7 1588 aa24.4■■□□□ 1.5
Synpo-206ENSMUST00000130360 Ube2uB1AUC4 352 aa24.31■■□□□ 1.48
Synpo-206ENSMUST00000130360 UbtfP25976 765 aaKnown RBP24.29■■□□□ 1.48
Synpo-206ENSMUST00000130360 Zcchc6Q5BLK4 1491 aaKnown RBP24.14■■□□□ 1.45
Synpo-206ENSMUST00000130360 Cdk11bP24788 784 aaKnown RBP24.14■■□□□ 1.45
Synpo-206ENSMUST00000130360 Stra8P70278 393 aa24.12■■□□□ 1.45
Synpo-206ENSMUST00000130360 Supt5hO55201 1082 aaKnown RBP24.06■■□□□ 1.44
Synpo-206ENSMUST00000130360 Nop58Q6DFW4 536 aaKnown RBP23.86■■□□□ 1.41
Synpo-206ENSMUST00000130360 Gm35339A0A140LHH9 1649 aa23.85■■□□□ 1.41
Synpo-206ENSMUST00000130360 Amer1Q7TS75 1132 aa23.85■■□□□ 1.41
Synpo-206ENSMUST00000130360 Dcaf1Q80TR8 1506 aa23.82■■□□□ 1.4
Synpo-206ENSMUST00000130360 Tnnt3Q9QZ47 272 aa23.8■■□□□ 1.4
Synpo-206ENSMUST00000130360 Mier1Q5UAK0 511 aa23.68■■□□□ 1.38
Synpo-206ENSMUST00000130360 TonslQ6NZL6 1363 aa23.6■■□□□ 1.37
Synpo-206ENSMUST00000130360 Cep164Q5DU05 1446 aa23.54■■□□□ 1.36
Synpo-206ENSMUST00000130360 Slc24a1Q91WD8 1130 aa23.53■■□□□ 1.36
Synpo-206ENSMUST00000130360 Il27Q8K3I6 234 aa23.5■■□□□ 1.35
Synpo-206ENSMUST00000130360 Neurod1Q60867 357 aa23.47■■□□□ 1.35
Synpo-206ENSMUST00000130360 Rtl5Q5DTT4 599 aa23.42■■□□□ 1.34
Synpo-206ENSMUST00000130360 NclP09405 707 aaKnown RBP23.4■■□□□ 1.34
Synpo-206ENSMUST00000130360 ClspnQ80YR7 1315 aa23.39■■□□□ 1.33
Synpo-206ENSMUST00000130360 Fam50aQ9WV03 339 aaKnown RBP23.37■■□□□ 1.33
Synpo-206ENSMUST00000130360 Rb1cc1Q9ESK9 1588 aa23.37■■□□□ 1.33
Synpo-206ENSMUST00000130360 Ttbk1Q6PCN3 1308 aa23.36■■□□□ 1.33
Synpo-206ENSMUST00000130360 DiexfQ8BTT6 772 aaKnown RBP23.35■■□□□ 1.33
Synpo-206ENSMUST00000130360 Brd4Q9ESU6 1400 aaKnown RBP23.35■■□□□ 1.33
Synpo-206ENSMUST00000130360 Ppargc1bQ8VHJ7 1014 aa23.33■■□□□ 1.33
Synpo-206ENSMUST00000130360 Ap3b1Q9Z1T1 1105 aa23.32■■□□□ 1.32
Synpo-206ENSMUST00000130360 NrdcQ8BHG1 1161 aa23.27■■□□□ 1.32
Synpo-206ENSMUST00000130360 Anks4bQ8K3X6 423 aa23.26■■□□□ 1.31
Synpo-206ENSMUST00000130360 4933416C03RikQ3V063 378 aa23.19■■□□□ 1.3
Synpo-206ENSMUST00000130360 Anp32bQ9EST5 272 aaKnown RBP23.14■■□□□ 1.3
Synpo-206ENSMUST00000130360 Aplp2Q06335 707 aa23.11■■□□□ 1.29
Synpo-206ENSMUST00000130360 Chic1Q8CBW7 227 aa23.1■■□□□ 1.29
Synpo-206ENSMUST00000130360 Csrnp3P59055 597 aa23.1■■□□□ 1.29
Synpo-206ENSMUST00000130360 Sall2Q9QX96 1004 aa23.1■■□□□ 1.29
Synpo-206ENSMUST00000130360 Anp32aO35381 247 aa23.08■■□□□ 1.28
Synpo-206ENSMUST00000130360 Plekhg3Q4VAC9 1341 aa23.05■■□□□ 1.28
Synpo-206ENSMUST00000130360 Eif5bQ05D44 1216 aaKnown RBP23.03■■□□□ 1.28
Synpo-206ENSMUST00000130360 Baz1aO88379 1555 aa22.96■■□□□ 1.27
Synpo-206ENSMUST00000130360 NeflP08551 543 aa22.96■■□□□ 1.27
Synpo-206ENSMUST00000130360 Clip1Q922J3 1391 aa22.93■■□□□ 1.26
Synpo-206ENSMUST00000130360 NacadQ5SWP3 1504 aa22.86■■□□□ 1.25
Synpo-206ENSMUST00000130360 Gm38655A0A286YDK6 273 aa22.83■■□□□ 1.24
Synpo-206ENSMUST00000130360 Npm1Q61937 292 aaKnown RBP22.77■■□□□ 1.24
Synpo-206ENSMUST00000130360 Lmod2Q3UHZ5 550 aa22.77■■□□□ 1.23
Synpo-206ENSMUST00000130360 Ccer2J3QPU5 274 aa22.75■■□□□ 1.23
Synpo-206ENSMUST00000130360 4930567H17RikQ3V0K5 233 aa22.74■■□□□ 1.23
Synpo-206ENSMUST00000130360 Golga3P55937 1487 aa22.7■■□□□ 1.22
Synpo-206ENSMUST00000130360 1700123L14RikQ3V2K7 440 aa22.68■■□□□ 1.22
Synpo-206ENSMUST00000130360 Eid3Q3V124 375 aa22.66■■□□□ 1.22
Synpo-206ENSMUST00000130360 Os9Q8K2C7 672 aa22.52■■□□□ 1.2
Synpo-206ENSMUST00000130360 DaxxO35613 739 aa22.49■■□□□ 1.19
Synpo-206ENSMUST00000130360 Mapk8ip2Q9ERE9 830 aa22.46■■□□□ 1.19
Synpo-206ENSMUST00000130360 Rsf1E9PWW9 1441 aaKnown RBP22.45■■□□□ 1.18
Synpo-206ENSMUST00000130360 Calr4Q3TQS0 420 aa22.43■■□□□ 1.18
Synpo-206ENSMUST00000130360 Kdm5dQ62240 1548 aa22.42■■□□□ 1.18
Synpo-206ENSMUST00000130360 Aebp2Q9Z248 504 aaKnown RBP22.36■■□□□ 1.17
Synpo-206ENSMUST00000130360 BlmO88700 1416 aa22.34■■□□□ 1.17
Synpo-206ENSMUST00000130360 Setd5Q5XJV7 1441 aa22.33■■□□□ 1.16
Synpo-206ENSMUST00000130360 Ppp4r2Q0VGB7 417 aa22.29■■□□□ 1.16
Synpo-206ENSMUST00000130360 Fam71e1A1L3C1 212 aa22.26■■□□□ 1.15
Synpo-206ENSMUST00000130360 Hdac5Q9Z2V6 1113 aa22.26■■□□□ 1.15
Synpo-206ENSMUST00000130360 Ccdc9Q8VC31 543 aaKnown RBP22.23■■□□□ 1.15
Synpo-206ENSMUST00000130360 Eea1Q8BL66 1411 aa22.22■■□□□ 1.15
Synpo-206ENSMUST00000130360 Wdr43Q6ZQL4 677 aaKnown RBP22.22■■□□□ 1.15
Synpo-206ENSMUST00000130360 Upf2A2AT37 1269 aaKnown RBP22.18■■□□□ 1.14
Synpo-206ENSMUST00000130360 Zbtb7cQ8VCZ7 619 aa22.14■■□□□ 1.14
Synpo-206ENSMUST00000130360 Hnrnpul2Q00PI9 745 aaKnown RBP22.14■■□□□ 1.13
Synpo-206ENSMUST00000130360 Crybg2B7ZCC2 1516 aa22.13■■□□□ 1.13
Synpo-206ENSMUST00000130360 Mrs2Q5NCE8 434 aa22.13■■□□□ 1.13
Synpo-206ENSMUST00000130360 Ccdc88bQ4QRL3 1481 aa22.09■■□□□ 1.13
Synpo-206ENSMUST00000130360 Bcl11aQ9QYE3 773 aa22.08■■□□□ 1.12
Synpo-206ENSMUST00000130360 Hsp90aa1P07901 733 aaKnown RBP22.07■■□□□ 1.12
Synpo-206ENSMUST00000130360 Chic2Q9D9G3 165 aa22.07■■□□□ 1.12
Synpo-206ENSMUST00000130360 Nlrp6Q91WS2 869 aa22.06■■□□□ 1.12
Retrieved 100 of 22,080 RNA–protein pairs in 52.3 ms