RNA–Protein interactions for RNA: ENSMUST00000110708.3

Srp54a-207, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Srp54a, Length 3,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54a-207ENSMUST00000110708 Gm35339A0A140LHH9 1649 aa19.51■□□□□ 0.71
Srp54a-207ENSMUST00000110708 Rpgrip1Q9EPQ2 1331 aa18.29■□□□□ 0.52
Srp54a-207ENSMUST00000110708 NischQ80TM9 1593 aa17.73■□□□□ 0.43
Srp54a-207ENSMUST00000110708 Rhox8Q6VSS7 320 aa17.66■□□□□ 0.42
Srp54a-207ENSMUST00000110708 Abcc9P70170 1546 aa17.61■□□□□ 0.41
Srp54a-207ENSMUST00000110708 Abcc8B2RUS7 1588 aa17.61■□□□□ 0.41
Srp54a-207ENSMUST00000110708 ScribQ80U72 1612 aa17.54■□□□□ 0.4
Srp54a-207ENSMUST00000110708 Myt1Q8CFC2 1127 aa17.41■□□□□ 0.38
Srp54a-207ENSMUST00000110708 Pcgf6Q99NA9 353 aa17.34■□□□□ 0.37
Srp54a-207ENSMUST00000110708 Las1lA2BE28 776 aaKnown RBP17.04■□□□□ 0.32
Srp54a-207ENSMUST00000110708 Acin1Q9JIX8 1338 aaKnown RBP17.02■□□□□ 0.32
Srp54a-207ENSMUST00000110708 Ehmt2Q9Z148 1263 aaKnown RBP16.98■□□□□ 0.31
Srp54a-207ENSMUST00000110708 DiexfQ8BTT6 772 aaKnown RBP16.97■□□□□ 0.31
Srp54a-207ENSMUST00000110708 CenpbP27790 599 aa16.93■□□□□ 0.3
Srp54a-207ENSMUST00000110708 Rtl1Q7M732 1744 aa16.64■□□□□ 0.25
Srp54a-207ENSMUST00000110708 Dcaf1Q80TR8 1506 aa16.62■□□□□ 0.25
Srp54a-207ENSMUST00000110708 NacadQ5SWP3 1504 aa16.51■□□□□ 0.23
Srp54a-207ENSMUST00000110708 Bcl11aQ9QYE3 773 aa16.49■□□□□ 0.23
Srp54a-207ENSMUST00000110708 Ccdc180J3QNE4 1664 aa16.48■□□□□ 0.23
Srp54a-207ENSMUST00000110708 Dnajc5bQ9CQ94 199 aa16.47■□□□□ 0.23
Srp54a-207ENSMUST00000110708 Neurod1Q60867 357 aa16.46■□□□□ 0.23
Srp54a-207ENSMUST00000110708 Kdm5dQ62240 1548 aa16.43■□□□□ 0.22
Srp54a-207ENSMUST00000110708 Trim41Q5NCC3 630 aa16.4■□□□□ 0.22
Srp54a-207ENSMUST00000110708 BicraF8VPZ9 1578 aa16.37■□□□□ 0.21
Srp54a-207ENSMUST00000110708 1700123L14RikQ3V2K7 440 aa16.37■□□□□ 0.21
Srp54a-207ENSMUST00000110708 Ccdc136Q3TVA9 1136 aa16.33■□□□□ 0.21
Srp54a-207ENSMUST00000110708 Sycp2Q9CUU3 1500 aa16.33■□□□□ 0.2
Srp54a-207ENSMUST00000110708 Amer1Q7TS75 1132 aa16.31■□□□□ 0.2
Srp54a-207ENSMUST00000110708 Thoc2B1AZI6 1594 aaKnown RBP16.27■□□□□ 0.2
Srp54a-207ENSMUST00000110708 Aplp2Q06335 707 aa16.16■□□□□ 0.18
Srp54a-207ENSMUST00000110708 Supt5hO55201 1082 aaKnown RBP16.13■□□□□ 0.17
Srp54a-207ENSMUST00000110708 Anks4bQ8K3X6 423 aa16.11■□□□□ 0.17
Srp54a-207ENSMUST00000110708 Cngb1E1AZ71 1325 aa15.98■□□□□ 0.15
Srp54a-207ENSMUST00000110708 Baz1bQ9Z277 1479 aa15.93■□□□□ 0.14
Srp54a-207ENSMUST00000110708 PrkcshO08795 521 aa15.91■□□□□ 0.14
Srp54a-207ENSMUST00000110708 Csrnp3P59055 597 aa15.89■□□□□ 0.13
Srp54a-207ENSMUST00000110708 Crybg2B7ZCC2 1516 aa15.81■□□□□ 0.12
Srp54a-207ENSMUST00000110708 Gab3Q8BSM5 595 aa15.76■□□□□ 0.11
Srp54a-207ENSMUST00000110708 Zeb1Q64318 1117 aa15.75■□□□□ 0.11
Srp54a-207ENSMUST00000110708 Fam135aQ6NS59 1506 aa15.67■□□□□ 0.1
Srp54a-207ENSMUST00000110708 CatipB9EKE5 520 aa15.63■□□□□ 0.09
Srp54a-207ENSMUST00000110708 HrcG5E8J6 738 aa15.57■□□□□ 0.08
Srp54a-207ENSMUST00000110708 Pds5bQ4VA53 1446 aaKnown RBP15.57■□□□□ 0.08
Srp54a-207ENSMUST00000110708 Zcchc6Q5BLK4 1491 aaKnown RBP15.54■□□□□ 0.08
Srp54a-207ENSMUST00000110708 Rtl5Q5DTT4 599 aa15.48■□□□□ 0.07
Srp54a-207ENSMUST00000110708 Cc2d2aQ8CFW7 1633 aa15.48■□□□□ 0.07
Srp54a-207ENSMUST00000110708 Ppargc1bQ8VHJ7 1014 aa15.44■□□□□ 0.06
Srp54a-207ENSMUST00000110708 Unc13aQ4KUS2 1712 aa15.44■□□□□ 0.06
Srp54a-207ENSMUST00000110708 NrdcQ8BHG1 1161 aa15.43■□□□□ 0.06
Srp54a-207ENSMUST00000110708 Rb1cc1Q9ESK9 1588 aa15.43■□□□□ 0.06
Srp54a-207ENSMUST00000110708 Smarca2Q6DIC0 1577 aa15.4■□□□□ 0.06
Srp54a-207ENSMUST00000110708 Fgd1P52734 960 aa15.39■□□□□ 0.05
Srp54a-207ENSMUST00000110708 Pknox2Q8BG99 474 aa15.38■□□□□ 0.05
Srp54a-207ENSMUST00000110708 Atad2bE9Q166 1460 aaKnown RBP15.34■□□□□ 0.05
Srp54a-207ENSMUST00000110708 Dnajc5P60904 198 aa15.33■□□□□ 0.04
Srp54a-207ENSMUST00000110708 Fam71e1A1L3C1 212 aa15.32■□□□□ 0.04
Srp54a-207ENSMUST00000110708 Ifnlr1Q8CGK5 535 aa15.32■□□□□ 0.04
Srp54a-207ENSMUST00000110708 NefmP08553 848 aa15.32■□□□□ 0.04
Srp54a-207ENSMUST00000110708 Cdk11bP24788 784 aaKnown RBP15.31■□□□□ 0.04
Srp54a-207ENSMUST00000110708 Sall2Q9QX96 1004 aa15.31■□□□□ 0.04
Srp54a-207ENSMUST00000110708 Baz1aO88379 1555 aa15.3■□□□□ 0.04
Srp54a-207ENSMUST00000110708 Wdr66E9Q743 1299 aa15.29■□□□□ 0.04
Srp54a-207ENSMUST00000110708 Ercc6F8VPZ5 1481 aa15.26■□□□□ 0.03
Srp54a-207ENSMUST00000110708 Chic1Q8CBW7 227 aa15.24■□□□□ 0.03
Srp54a-207ENSMUST00000110708 Hdac5Q9Z2V6 1113 aa15.24■□□□□ 0.03
Srp54a-207ENSMUST00000110708 Wdr62Q3U3T8 1523 aa15.21■□□□□ 0.02
Srp54a-207ENSMUST00000110708 Mier1Q5UAK0 511 aa15.19■□□□□ 0.02
Srp54a-207ENSMUST00000110708 UbtfP25976 765 aaKnown RBP15.19■□□□□ 0.02
Srp54a-207ENSMUST00000110708 Pelp1Q9DBD5 1123 aaKnown RBP15.17■□□□□ 0.02
Srp54a-207ENSMUST00000110708 Smarca4Q3TKT4 1613 aaKnown RBP15.16■□□□□ 0.02
Srp54a-207ENSMUST00000110708 Nop58Q6DFW4 536 aaKnown RBP15.15■□□□□ 0.02
Srp54a-207ENSMUST00000110708 Esf1Q3V1V3 845 aaKnown RBP15.13■□□□□ 0.01
Srp54a-207ENSMUST00000110708 Ccdc9Q8VC31 543 aaKnown RBP15.09■□□□□ 0.01
Srp54a-207ENSMUST00000110708 Myt1lP97500 1187 aa15.09■□□□□ 0.01
Srp54a-207ENSMUST00000110708 Gm38655A0A286YDK6 273 aa15.07■□□□□ 0
Srp54a-207ENSMUST00000110708 Iqgap2Q3UQ44 1575 aa15.07■□□□□ 0
Srp54a-207ENSMUST00000110708 Tnnt3Q9QZ47 272 aa15.06■□□□□ 0
Srp54a-207ENSMUST00000110708 BccipQ9CWI3 316 aa15□□□□□ -0.01
Srp54a-207ENSMUST00000110708 Frmpd1A2AKB4 1549 aa14.98□□□□□ -0.01
Srp54a-207ENSMUST00000110708 Anp32aO35381 247 aa14.97□□□□□ -0.01
Srp54a-207ENSMUST00000110708 Phldb1Q6PDH0 1371 aaKnown RBP14.96□□□□□ -0.01
Srp54a-207ENSMUST00000110708 Gtf3c3Q3TMP1 882 aa14.96□□□□□ -0.01
Srp54a-207ENSMUST00000110708 Gtf3c5Q8R2T8 520 aa14.95□□□□□ -0.02
Srp54a-207ENSMUST00000110708 Cep164Q5DU05 1446 aa14.93□□□□□ -0.02
Srp54a-207ENSMUST00000110708 ClspnQ80YR7 1315 aa14.92□□□□□ -0.02
Srp54a-207ENSMUST00000110708 Aebp2Q9Z248 504 aaKnown RBP14.91□□□□□ -0.02
Srp54a-207ENSMUST00000110708 Ubl4bQ9CQ84 188 aa14.9□□□□□ -0.02
Srp54a-207ENSMUST00000110708 Cecr2E9Q2Z1 1453 aa14.89□□□□□ -0.03
Srp54a-207ENSMUST00000110708 Mrc2Q64449 1479 aa14.87□□□□□ -0.03
Srp54a-207ENSMUST00000110708 Rsf1E9PWW9 1441 aaKnown RBP14.86□□□□□ -0.03
Srp54a-207ENSMUST00000110708 Upf2A2AT37 1269 aaKnown RBP14.83□□□□□ -0.04
Srp54a-207ENSMUST00000110708 Irx3P81067 507 aa14.82□□□□□ -0.04
Srp54a-207ENSMUST00000110708 Plppr3Q7TPB0 716 aa14.81□□□□□ -0.04
Srp54a-207ENSMUST00000110708 Ipo4Q8VI75 1082 aa14.8□□□□□ -0.04
Srp54a-207ENSMUST00000110708 Npm2Q80W85 207 aa14.77□□□□□ -0.05
Srp54a-207ENSMUST00000110708 Plcd4Q8K3R3 807 aa14.77□□□□□ -0.05
Srp54a-207ENSMUST00000110708 Mapk8ip2Q9ERE9 830 aa14.76□□□□□ -0.05
Srp54a-207ENSMUST00000110708 Znf316Q6PGE4 1016 aa14.75□□□□□ -0.05
Srp54a-207ENSMUST00000110708 Lrriq1Q0P5X1 1673 aa14.74□□□□□ -0.05
Srp54a-207ENSMUST00000110708 Shroom2A2ALU4 1481 aa14.74□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 65.5 ms