RNA–Protein interactions for RNA: ENSMUST00000103005.9

Shroom4-202, Transcript of Protein Shroom4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shroom4, Length 4,839 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4-202ENSMUST00000103005 Rhox8Q6VSS7 320 aa29.28■■■□□ 2.28
Shroom4-202ENSMUST00000103005 Rpgrip1Q9EPQ2 1331 aa27.82■■■□□ 2.04
Shroom4-202ENSMUST00000103005 Ehmt2Q9Z148 1263 aaKnown RBP27.14■■□□□ 1.94
Shroom4-202ENSMUST00000103005 Las1lA2BE28 776 aaKnown RBP26.33■■□□□ 1.81
Shroom4-202ENSMUST00000103005 NischQ80TM9 1593 aa26.32■■□□□ 1.8
Shroom4-202ENSMUST00000103005 Ccdc136Q3TVA9 1136 aa26.27■■□□□ 1.8
Shroom4-202ENSMUST00000103005 Acin1Q9JIX8 1338 aaKnown RBP26.15■■□□□ 1.78
Shroom4-202ENSMUST00000103005 Zeb1Q64318 1117 aa26■■□□□ 1.75
Shroom4-202ENSMUST00000103005 Wdr66E9Q743 1299 aa25.88■■□□□ 1.73
Shroom4-202ENSMUST00000103005 Cngb1E1AZ71 1325 aa25.87■■□□□ 1.73
Shroom4-202ENSMUST00000103005 Trim41Q5NCC3 630 aa25.79■■□□□ 1.72
Shroom4-202ENSMUST00000103005 Gab3Q8BSM5 595 aa25.69■■□□□ 1.7
Shroom4-202ENSMUST00000103005 Pcgf6Q99NA9 353 aa25.55■■□□□ 1.68
Shroom4-202ENSMUST00000103005 Ccdc180J3QNE4 1664 aa25.48■■□□□ 1.67
Shroom4-202ENSMUST00000103005 Esf1Q3V1V3 845 aaKnown RBP25.36■■□□□ 1.65
Shroom4-202ENSMUST00000103005 HrcG5E8J6 738 aa25.31■■□□□ 1.64
Shroom4-202ENSMUST00000103005 NefmP08553 848 aa25.29■■□□□ 1.64
Shroom4-202ENSMUST00000103005 CenpbP27790 599 aa25.19■■□□□ 1.62
Shroom4-202ENSMUST00000103005 Rtl1Q7M732 1744 aa25.12■■□□□ 1.61
Shroom4-202ENSMUST00000103005 Pelp1Q9DBD5 1123 aaKnown RBP25.06■■□□□ 1.6
Shroom4-202ENSMUST00000103005 Supt5hO55201 1082 aaKnown RBP24.98■■□□□ 1.59
Shroom4-202ENSMUST00000103005 Myt1lP97500 1187 aa24.98■■□□□ 1.59
Shroom4-202ENSMUST00000103005 UbtfP25976 765 aaKnown RBP24.94■■□□□ 1.58
Shroom4-202ENSMUST00000103005 Npm2Q80W85 207 aa24.91■■□□□ 1.58
Shroom4-202ENSMUST00000103005 Cdk11bP24788 784 aaKnown RBP24.8■■□□□ 1.56
Shroom4-202ENSMUST00000103005 Ube2uB1AUC4 352 aa24.79■■□□□ 1.56
Shroom4-202ENSMUST00000103005 Abcc9P70170 1546 aa24.74■■□□□ 1.55
Shroom4-202ENSMUST00000103005 Nop58Q6DFW4 536 aaKnown RBP24.58■■□□□ 1.53
Shroom4-202ENSMUST00000103005 Myt1Q8CFC2 1127 aa24.57■■□□□ 1.52
Shroom4-202ENSMUST00000103005 Stra8P70278 393 aa24.47■■□□□ 1.51
Shroom4-202ENSMUST00000103005 Ppargc1bQ8VHJ7 1014 aa24.45■■□□□ 1.51
Shroom4-202ENSMUST00000103005 Neurod1Q60867 357 aa24.35■■□□□ 1.49
Shroom4-202ENSMUST00000103005 Mier1Q5UAK0 511 aa24.34■■□□□ 1.49
Shroom4-202ENSMUST00000103005 Slc24a1Q91WD8 1130 aa24.33■■□□□ 1.49
Shroom4-202ENSMUST00000103005 Tnnt3Q9QZ47 272 aa24.21■■□□□ 1.47
Shroom4-202ENSMUST00000103005 Amer1Q7TS75 1132 aa24.18■■□□□ 1.46
Shroom4-202ENSMUST00000103005 Zcchc6Q5BLK4 1491 aaKnown RBP24.16■■□□□ 1.46
Shroom4-202ENSMUST00000103005 Dcaf1Q80TR8 1506 aa24.13■■□□□ 1.45
Shroom4-202ENSMUST00000103005 TonslQ6NZL6 1363 aa24.1■■□□□ 1.45
Shroom4-202ENSMUST00000103005 Abcc8B2RUS7 1588 aa24.08■■□□□ 1.44
Shroom4-202ENSMUST00000103005 Sall2Q9QX96 1004 aa24.03■■□□□ 1.44
Shroom4-202ENSMUST00000103005 ClspnQ80YR7 1315 aa23.96■■□□□ 1.43
Shroom4-202ENSMUST00000103005 Ttbk1Q6PCN3 1308 aa23.96■■□□□ 1.43
Shroom4-202ENSMUST00000103005 NclP09405 707 aaKnown RBP23.94■■□□□ 1.42
Shroom4-202ENSMUST00000103005 Anks4bQ8K3X6 423 aa23.93■■□□□ 1.42
Shroom4-202ENSMUST00000103005 Csrnp3P59055 597 aa23.91■■□□□ 1.42
Shroom4-202ENSMUST00000103005 Fam50aQ9WV03 339 aaKnown RBP23.87■■□□□ 1.41
Shroom4-202ENSMUST00000103005 Ap3b1Q9Z1T1 1105 aa23.84■■□□□ 1.41
Shroom4-202ENSMUST00000103005 Il27Q8K3I6 234 aa23.83■■□□□ 1.4
Shroom4-202ENSMUST00000103005 Gm38655A0A286YDK6 273 aa23.77■■□□□ 1.4
Shroom4-202ENSMUST00000103005 Eif5bQ05D44 1216 aaKnown RBP23.75■■□□□ 1.39
Shroom4-202ENSMUST00000103005 NrdcQ8BHG1 1161 aa23.74■■□□□ 1.39
Shroom4-202ENSMUST00000103005 DiexfQ8BTT6 772 aaKnown RBP23.72■■□□□ 1.39
Shroom4-202ENSMUST00000103005 Cep164Q5DU05 1446 aa23.69■■□□□ 1.38
Shroom4-202ENSMUST00000103005 Aplp2Q06335 707 aa23.68■■□□□ 1.38
Shroom4-202ENSMUST00000103005 Rtl5Q5DTT4 599 aa23.63■■□□□ 1.37
Shroom4-202ENSMUST00000103005 Plekhg3Q4VAC9 1341 aa23.6■■□□□ 1.37
Shroom4-202ENSMUST00000103005 4933416C03RikQ3V063 378 aa23.59■■□□□ 1.37
Shroom4-202ENSMUST00000103005 Chic1Q8CBW7 227 aa23.59■■□□□ 1.37
Shroom4-202ENSMUST00000103005 Anp32aO35381 247 aa23.56■■□□□ 1.36
Shroom4-202ENSMUST00000103005 1700123L14RikQ3V2K7 440 aa23.51■■□□□ 1.35
Shroom4-202ENSMUST00000103005 Gm35339A0A140LHH9 1649 aa23.48■■□□□ 1.35
Shroom4-202ENSMUST00000103005 Mapk8ip2Q9ERE9 830 aa23.45■■□□□ 1.35
Shroom4-202ENSMUST00000103005 Eid3Q3V124 375 aa23.44■■□□□ 1.34
Shroom4-202ENSMUST00000103005 NeflP08551 543 aa23.41■■□□□ 1.34
Shroom4-202ENSMUST00000103005 Anp32bQ9EST5 272 aaKnown RBP23.38■■□□□ 1.33
Shroom4-202ENSMUST00000103005 Aebp2Q9Z248 504 aaKnown RBP23.25■■□□□ 1.31
Shroom4-202ENSMUST00000103005 Lmod2Q3UHZ5 550 aa23.24■■□□□ 1.31
Shroom4-202ENSMUST00000103005 Clip1Q922J3 1391 aa23.19■■□□□ 1.3
Shroom4-202ENSMUST00000103005 Brd4Q9ESU6 1400 aaKnown RBP23.17■■□□□ 1.3
Shroom4-202ENSMUST00000103005 Rb1cc1Q9ESK9 1588 aa23.15■■□□□ 1.3
Shroom4-202ENSMUST00000103005 Calr4Q3TQS0 420 aa23.08■■□□□ 1.29
Shroom4-202ENSMUST00000103005 DaxxO35613 739 aa23.03■■□□□ 1.28
Shroom4-202ENSMUST00000103005 Fam71e1A1L3C1 212 aa22.98■■□□□ 1.27
Shroom4-202ENSMUST00000103005 Ppp4r2Q0VGB7 417 aa22.97■■□□□ 1.27
Shroom4-202ENSMUST00000103005 Wdr43Q6ZQL4 677 aaKnown RBP22.84■■□□□ 1.25
Shroom4-202ENSMUST00000103005 Os9Q8K2C7 672 aa22.84■■□□□ 1.25
Shroom4-202ENSMUST00000103005 Ccer2J3QPU5 274 aa22.8■■□□□ 1.24
Shroom4-202ENSMUST00000103005 4930567H17RikQ3V0K5 233 aa22.8■■□□□ 1.24
Shroom4-202ENSMUST00000103005 Mrs2Q5NCE8 434 aa22.74■■□□□ 1.23
Shroom4-202ENSMUST00000103005 Rsf1E9PWW9 1441 aaKnown RBP22.74■■□□□ 1.23
Shroom4-202ENSMUST00000103005 Npm1Q61937 292 aaKnown RBP22.73■■□□□ 1.23
Shroom4-202ENSMUST00000103005 Hnrnpul2Q00PI9 745 aaKnown RBP22.71■■□□□ 1.23
Shroom4-202ENSMUST00000103005 SafbD3YXK2 937 aaKnown RBP22.7■■□□□ 1.22
Shroom4-202ENSMUST00000103005 Zbtb4Q5F293 982 aa22.69■■□□□ 1.22
Shroom4-202ENSMUST00000103005 Zbtb7cQ8VCZ7 619 aa22.69■■□□□ 1.22
Shroom4-202ENSMUST00000103005 Baz1aO88379 1555 aa22.67■■□□□ 1.22
Shroom4-202ENSMUST00000103005 Golga3P55937 1487 aa22.66■■□□□ 1.22
Shroom4-202ENSMUST00000103005 BlmO88700 1416 aa22.6■■□□□ 1.21
Shroom4-202ENSMUST00000103005 Bcl11aQ9QYE3 773 aa22.6■■□□□ 1.21
Shroom4-202ENSMUST00000103005 Chic2Q9D9G3 165 aa22.53■■□□□ 1.2
Shroom4-202ENSMUST00000103005 Setd5Q5XJV7 1441 aa22.51■■□□□ 1.19
Shroom4-202ENSMUST00000103005 ArxO35085 564 aa22.5■■□□□ 1.19
Shroom4-202ENSMUST00000103005 Hsp90aa1P07901 733 aaKnown RBP22.47■■□□□ 1.19
Shroom4-202ENSMUST00000103005 P3h3Q8CG70 732 aa22.47■■□□□ 1.19
Shroom4-202ENSMUST00000103005 Ccdc9Q8VC31 543 aaKnown RBP22.47■■□□□ 1.19
Shroom4-202ENSMUST00000103005 Upf2A2AT37 1269 aaKnown RBP22.43■■□□□ 1.18
Shroom4-202ENSMUST00000103005 NacadQ5SWP3 1504 aa22.4■■□□□ 1.18
Shroom4-202ENSMUST00000103005 Rad21Q61550 635 aaKnown RBP22.4■■□□□ 1.18
Shroom4-202ENSMUST00000103005 Nlrp6Q91WS2 869 aa22.39■■□□□ 1.17
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms