RNA–Protein interactions for RNA: ENSMUST00000098180.9

Trim6-201, Transcript of Tripartite motif-containing protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim6, Length 3,827 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6-201ENSMUST00000098180 Chic1Q8CBW7 227 aa10.5□□□□□ -0.73
Trim6-201ENSMUST00000098180 Ube2uB1AUC4 352 aa10.46□□□□□ -0.73
Trim6-201ENSMUST00000098180 Rhox8Q6VSS7 320 aa10.4□□□□□ -0.74
Trim6-201ENSMUST00000098180 NischQ80TM9 1593 aa10.35□□□□□ -0.75
Trim6-201ENSMUST00000098180 Mapk8ip2Q9ERE9 830 aa10.03□□□□□ -0.8
Trim6-201ENSMUST00000098180 Plppr3Q7TPB0 716 aa9.98□□□□□ -0.81
Trim6-201ENSMUST00000098180 Kcna4Q61423 654 aa9.88□□□□□ -0.83
Trim6-201ENSMUST00000098180 Abcc9P70170 1546 aa9.87□□□□□ -0.83
Trim6-201ENSMUST00000098180 Abcc8B2RUS7 1588 aa9.7□□□□□ -0.86
Trim6-201ENSMUST00000098180 Gm35339A0A140LHH9 1649 aa9.68□□□□□ -0.86
Trim6-201ENSMUST00000098180 Phf23Q8BSN5 401 aa9.65□□□□□ -0.86
Trim6-201ENSMUST00000098180 Ccdc136Q3TVA9 1136 aa9.52□□□□□ -0.88
Trim6-201ENSMUST00000098180 Ppargc1bQ8VHJ7 1014 aa9.49□□□□□ -0.89
Trim6-201ENSMUST00000098180 Gab3Q8BSM5 595 aa9.42□□□□□ -0.9
Trim6-201ENSMUST00000098180 Ehmt2Q9Z148 1263 aaKnown RBP9.36□□□□□ -0.91
Trim6-201ENSMUST00000098180 Rtl1Q7M732 1744 aa9.27□□□□□ -0.93
Trim6-201ENSMUST00000098180 Trim41Q5NCC3 630 aa9.26□□□□□ -0.93
Trim6-201ENSMUST00000098180 Ccdc180J3QNE4 1664 aa9.25□□□□□ -0.93
Trim6-201ENSMUST00000098180 Senp3Q9EP97 568 aaKnown RBP9.19□□□□□ -0.94
Trim6-201ENSMUST00000098180 Cngb1E1AZ71 1325 aa9.19□□□□□ -0.94
Trim6-201ENSMUST00000098180 Esf1Q3V1V3 845 aaKnown RBP9.16□□□□□ -0.94
Trim6-201ENSMUST00000098180 Zcchc6Q5BLK4 1491 aaKnown RBP9.14□□□□□ -0.95
Trim6-201ENSMUST00000098180 Rpgrip1Q9EPQ2 1331 aa9.11□□□□□ -0.95
Trim6-201ENSMUST00000098180 HrcG5E8J6 738 aa9.09□□□□□ -0.95
Trim6-201ENSMUST00000098180 Fam71e1A1L3C1 212 aa9.09□□□□□ -0.95
Trim6-201ENSMUST00000098180 Rb1cc1Q9ESK9 1588 aa9.06□□□□□ -0.96
Trim6-201ENSMUST00000098180 NacadQ5SWP3 1504 aa8.96□□□□□ -0.98
Trim6-201ENSMUST00000098180 Dcaf1Q80TR8 1506 aa8.95□□□□□ -0.98
Trim6-201ENSMUST00000098180 Kdm5dQ62240 1548 aa8.93□□□□□ -0.98
Trim6-201ENSMUST00000098180 Baz1aO88379 1555 aa8.9□□□□□ -0.98
Trim6-201ENSMUST00000098180 Slc4a1apE9PX68 744 aa8.9□□□□□ -0.98
Trim6-201ENSMUST00000098180 Dmrt2Q8BG36 561 aa8.9□□□□□ -0.98
Trim6-201ENSMUST00000098180 ScribQ80U72 1612 aa8.9□□□□□ -0.98
Trim6-201ENSMUST00000098180 Acin1Q9JIX8 1338 aaKnown RBP8.88□□□□□ -0.99
Trim6-201ENSMUST00000098180 Npm2Q80W85 207 aa8.83□□□□□ -1
Trim6-201ENSMUST00000098180 Myt1lP97500 1187 aa8.83□□□□□ -1
Trim6-201ENSMUST00000098180 Brd4Q9ESU6 1400 aaKnown RBP8.78□□□□□ -1
Trim6-201ENSMUST00000098180 Zeb1Q64318 1117 aa8.75□□□□□ -1.01
Trim6-201ENSMUST00000098180 Il27Q8K3I6 234 aa8.72□□□□□ -1.01
Trim6-201ENSMUST00000098180 Cep164Q5DU05 1446 aa8.7□□□□□ -1.02
Trim6-201ENSMUST00000098180 Prdm10Q3UTQ7 1184 aa8.7□□□□□ -1.02
Trim6-201ENSMUST00000098180 Prdm16A2A935 1275 aa8.69□□□□□ -1.02
Trim6-201ENSMUST00000098180 UbtfP25976 765 aaKnown RBP8.69□□□□□ -1.02
Trim6-201ENSMUST00000098180 Sycp2Q9CUU3 1500 aa8.68□□□□□ -1.02
Trim6-201ENSMUST00000098180 DiexfQ8BTT6 772 aaKnown RBP8.68□□□□□ -1.02
Trim6-201ENSMUST00000098180 Taok2Q6ZQ29 1240 aa8.68□□□□□ -1.02
Trim6-201ENSMUST00000098180 ArxO35085 564 aa8.66□□□□□ -1.02
Trim6-201ENSMUST00000098180 Crybg2B7ZCC2 1516 aa8.65□□□□□ -1.02
Trim6-201ENSMUST00000098180 Arid3aQ62431 601 aa8.64□□□□□ -1.03
Trim6-201ENSMUST00000098180 Pde4cQ3UEI1 686 aa8.63□□□□□ -1.03
Trim6-201ENSMUST00000098180 Ttbk1Q6PCN3 1308 aa8.61□□□□□ -1.03
Trim6-201ENSMUST00000098180 Las1lA2BE28 776 aaKnown RBP8.6□□□□□ -1.03
Trim6-201ENSMUST00000098180 NefmP08553 848 aa8.6□□□□□ -1.03
Trim6-201ENSMUST00000098180 Smarca2Q6DIC0 1577 aa8.59□□□□□ -1.03
Trim6-201ENSMUST00000098180 Wdr66E9Q743 1299 aa8.59□□□□□ -1.03
Trim6-201ENSMUST00000098180 Golga3P55937 1487 aa8.58□□□□□ -1.04
Trim6-201ENSMUST00000098180 AcrbpQ3V140 540 aa8.58□□□□□ -1.04
Trim6-201ENSMUST00000098180 Cecr2E9Q2Z1 1453 aa8.57□□□□□ -1.04
Trim6-201ENSMUST00000098180 Rsf1E9PWW9 1441 aaKnown RBP8.57□□□□□ -1.04
Trim6-201ENSMUST00000098180 Rtn4Q99P72 1162 aaKnown RBP8.53□□□□□ -1.04
Trim6-201ENSMUST00000098180 Mier1Q5UAK0 511 aa8.53□□□□□ -1.04
Trim6-201ENSMUST00000098180 Ecm2Q5FW85 670 aa8.52□□□□□ -1.04
Trim6-201ENSMUST00000098180 Ap3b1Q9Z1T1 1105 aa8.52□□□□□ -1.05
Trim6-201ENSMUST00000098180 Pcgf6Q99NA9 353 aa8.52□□□□□ -1.05
Trim6-201ENSMUST00000098180 Vsig10D3YX43 558 aa8.51□□□□□ -1.05
Trim6-201ENSMUST00000098180 Ccdc88bQ4QRL3 1481 aa8.5□□□□□ -1.05
Trim6-201ENSMUST00000098180 Nlrp6Q91WS2 869 aa8.48□□□□□ -1.05
Trim6-201ENSMUST00000098180 CftrP26361 1476 aa8.47□□□□□ -1.05
Trim6-201ENSMUST00000098180 Npm1Q61937 292 aaKnown RBP8.46□□□□□ -1.05
Trim6-201ENSMUST00000098180 Plekhg3Q4VAC9 1341 aa8.46□□□□□ -1.05
Trim6-201ENSMUST00000098180 CatipB9EKE5 520 aa8.46□□□□□ -1.06
Trim6-201ENSMUST00000098180 Tshz2Q68FE9 1030 aa8.45□□□□□ -1.06
Trim6-201ENSMUST00000098180 Synj1Q8CHC4 1574 aa8.44□□□□□ -1.06
Trim6-201ENSMUST00000098180 Supt5hO55201 1082 aaKnown RBP8.43□□□□□ -1.06
Trim6-201ENSMUST00000098180 Ubl4bQ9CQ84 188 aa8.4□□□□□ -1.06
Trim6-201ENSMUST00000098180 Clip1Q922J3 1391 aa8.4□□□□□ -1.07
Trim6-201ENSMUST00000098180 Fam50aQ9WV03 339 aaKnown RBP8.38□□□□□ -1.07
Trim6-201ENSMUST00000098180 Pds5bQ4VA53 1446 aaKnown RBP8.37□□□□□ -1.07
Trim6-201ENSMUST00000098180 Kif15Q6P9L6 1387 aa8.36□□□□□ -1.07
Trim6-201ENSMUST00000098180 Lmod2Q3UHZ5 550 aa8.35□□□□□ -1.07
Trim6-201ENSMUST00000098180 BicraF8VPZ9 1578 aa8.35□□□□□ -1.07
Trim6-201ENSMUST00000098180 Smarca4Q3TKT4 1613 aaKnown RBP8.35□□□□□ -1.07
Trim6-201ENSMUST00000098180 Fmn1Q05860 1466 aa8.33□□□□□ -1.08
Trim6-201ENSMUST00000098180 TonslQ6NZL6 1363 aa8.31□□□□□ -1.08
Trim6-201ENSMUST00000098180 Atad2bE9Q166 1460 aaKnown RBP8.31□□□□□ -1.08
Trim6-201ENSMUST00000098180 Ercc6F8VPZ5 1481 aa8.31□□□□□ -1.08
Trim6-201ENSMUST00000098180 Cttnbp2B9EJA2 1648 aa8.31□□□□□ -1.08
Trim6-201ENSMUST00000098180 Cdca7Q9D0M2 382 aa8.29□□□□□ -1.08
Trim6-201ENSMUST00000098180 Cep162Q6ZQ06 1403 aa8.27□□□□□ -1.09
Trim6-201ENSMUST00000098180 Eid3Q3V124 375 aa8.26□□□□□ -1.09
Trim6-201ENSMUST00000098180 Setd5Q5XJV7 1441 aa8.26□□□□□ -1.09
Trim6-201ENSMUST00000098180 Iqgap2Q3UQ44 1575 aa8.25□□□□□ -1.09
Trim6-201ENSMUST00000098180 Ccdc18Q640L5 1455 aa8.24□□□□□ -1.09
Trim6-201ENSMUST00000098180 Sall2Q9QX96 1004 aa8.24□□□□□ -1.09
Trim6-201ENSMUST00000098180 NclP09405 707 aaKnown RBP8.22□□□□□ -1.09
Trim6-201ENSMUST00000098180 Rapgef2Q8CHG7 1496 aa8.22□□□□□ -1.09
Trim6-201ENSMUST00000098180 BlmO88700 1416 aa8.21□□□□□ -1.09
Trim6-201ENSMUST00000098180 Eea1Q8BL66 1411 aa8.21□□□□□ -1.09
Trim6-201ENSMUST00000098180 Cdk11bP24788 784 aaKnown RBP8.21□□□□□ -1.1
Trim6-201ENSMUST00000098180 Nop58Q6DFW4 536 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 45.7 ms