RNA–Protein interactions for RNA: ENSMUST00000096386.12

Rnf41-201, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-201ENSMUST00000096386 Rpgrip1Q9EPQ2 1331 aa18.87■□□□□ 0.61
Rnf41-201ENSMUST00000096386 NischQ80TM9 1593 aa18.63■□□□□ 0.57
Rnf41-201ENSMUST00000096386 Gm35339A0A140LHH9 1649 aa18.46■□□□□ 0.54
Rnf41-201ENSMUST00000096386 Acin1Q9JIX8 1338 aaKnown RBP18.07■□□□□ 0.48
Rnf41-201ENSMUST00000096386 Pcgf6Q99NA9 353 aa17.96■□□□□ 0.47
Rnf41-201ENSMUST00000096386 Rtl1Q7M732 1744 aa17.95■□□□□ 0.46
Rnf41-201ENSMUST00000096386 Abcc9P70170 1546 aa17.93■□□□□ 0.46
Rnf41-201ENSMUST00000096386 Abcc8B2RUS7 1588 aa17.9■□□□□ 0.46
Rnf41-201ENSMUST00000096386 Ccdc180J3QNE4 1664 aa17.84■□□□□ 0.45
Rnf41-201ENSMUST00000096386 Las1lA2BE28 776 aaKnown RBP17.4■□□□□ 0.38
Rnf41-201ENSMUST00000096386 Neurod1Q60867 357 aa17.38■□□□□ 0.37
Rnf41-201ENSMUST00000096386 Ehmt2Q9Z148 1263 aaKnown RBP17.34■□□□□ 0.37
Rnf41-201ENSMUST00000096386 Rhox8Q6VSS7 320 aa17.33■□□□□ 0.37
Rnf41-201ENSMUST00000096386 Trim41Q5NCC3 630 aa17.33■□□□□ 0.36
Rnf41-201ENSMUST00000096386 Supt5hO55201 1082 aaKnown RBP17.3■□□□□ 0.36
Rnf41-201ENSMUST00000096386 Dcaf1Q80TR8 1506 aa17.24■□□□□ 0.35
Rnf41-201ENSMUST00000096386 Myt1Q8CFC2 1127 aa17.24■□□□□ 0.35
Rnf41-201ENSMUST00000096386 CenpbP27790 599 aa17.13■□□□□ 0.33
Rnf41-201ENSMUST00000096386 ScribQ80U72 1612 aa17.1■□□□□ 0.33
Rnf41-201ENSMUST00000096386 1700123L14RikQ3V2K7 440 aa17.09■□□□□ 0.33
Rnf41-201ENSMUST00000096386 Zcchc6Q5BLK4 1491 aaKnown RBP17.01■□□□□ 0.31
Rnf41-201ENSMUST00000096386 DiexfQ8BTT6 772 aaKnown RBP16.95■□□□□ 0.3
Rnf41-201ENSMUST00000096386 HrcG5E8J6 738 aa16.84■□□□□ 0.29
Rnf41-201ENSMUST00000096386 Anks4bQ8K3X6 423 aa16.83■□□□□ 0.28
Rnf41-201ENSMUST00000096386 Csrnp3P59055 597 aa16.82■□□□□ 0.28
Rnf41-201ENSMUST00000096386 Aplp2Q06335 707 aa16.7■□□□□ 0.26
Rnf41-201ENSMUST00000096386 NacadQ5SWP3 1504 aa16.69■□□□□ 0.26
Rnf41-201ENSMUST00000096386 Bcl11aQ9QYE3 773 aa16.67■□□□□ 0.26
Rnf41-201ENSMUST00000096386 Kdm5dQ62240 1548 aa16.67■□□□□ 0.26
Rnf41-201ENSMUST00000096386 Zeb1Q64318 1117 aa16.58■□□□□ 0.24
Rnf41-201ENSMUST00000096386 Cngb1E1AZ71 1325 aa16.58■□□□□ 0.24
Rnf41-201ENSMUST00000096386 Sall2Q9QX96 1004 aa16.53■□□□□ 0.24
Rnf41-201ENSMUST00000096386 NefmP08553 848 aa16.4■□□□□ 0.22
Rnf41-201ENSMUST00000096386 Sycp2Q9CUU3 1500 aa16.34■□□□□ 0.21
Rnf41-201ENSMUST00000096386 Cdk11bP24788 784 aaKnown RBP16.28■□□□□ 0.2
Rnf41-201ENSMUST00000096386 Gm38655A0A286YDK6 273 aa16.24■□□□□ 0.19
Rnf41-201ENSMUST00000096386 Rb1cc1Q9ESK9 1588 aa16.24■□□□□ 0.19
Rnf41-201ENSMUST00000096386 PrkcshO08795 521 aa16.23■□□□□ 0.19
Rnf41-201ENSMUST00000096386 Nop58Q6DFW4 536 aaKnown RBP16.19■□□□□ 0.18
Rnf41-201ENSMUST00000096386 Fam71e1A1L3C1 212 aa16.12■□□□□ 0.17
Rnf41-201ENSMUST00000096386 Mier1Q5UAK0 511 aa16.09■□□□□ 0.17
Rnf41-201ENSMUST00000096386 Amer1Q7TS75 1132 aa16.05■□□□□ 0.16
Rnf41-201ENSMUST00000096386 BicraF8VPZ9 1578 aa16.04■□□□□ 0.16
Rnf41-201ENSMUST00000096386 Cep164Q5DU05 1446 aa16.03■□□□□ 0.16
Rnf41-201ENSMUST00000096386 Wdr66E9Q743 1299 aa16.02■□□□□ 0.16
Rnf41-201ENSMUST00000096386 Ifnlr1Q8CGK5 535 aa15.99■□□□□ 0.15
Rnf41-201ENSMUST00000096386 ClspnQ80YR7 1315 aa15.99■□□□□ 0.15
Rnf41-201ENSMUST00000096386 Aebp2Q9Z248 504 aaKnown RBP15.99■□□□□ 0.15
Rnf41-201ENSMUST00000096386 Baz1aO88379 1555 aa15.98■□□□□ 0.15
Rnf41-201ENSMUST00000096386 Ccdc136Q3TVA9 1136 aa15.97■□□□□ 0.15
Rnf41-201ENSMUST00000096386 Mapk8ip2Q9ERE9 830 aa15.85■□□□□ 0.13
Rnf41-201ENSMUST00000096386 Crybg2B7ZCC2 1516 aa15.8■□□□□ 0.12
Rnf41-201ENSMUST00000096386 SafbD3YXK2 937 aaKnown RBP15.8■□□□□ 0.12
Rnf41-201ENSMUST00000096386 Tnnt3Q9QZ47 272 aa15.77■□□□□ 0.12
Rnf41-201ENSMUST00000096386 Hnrnpul2Q00PI9 745 aaKnown RBP15.75■□□□□ 0.11
Rnf41-201ENSMUST00000096386 Rtl5Q5DTT4 599 aa15.75■□□□□ 0.11
Rnf41-201ENSMUST00000096386 Ppargc1bQ8VHJ7 1014 aa15.74■□□□□ 0.11
Rnf41-201ENSMUST00000096386 Dnajc5bQ9CQ94 199 aa15.72■□□□□ 0.11
Rnf41-201ENSMUST00000096386 Pds5bQ4VA53 1446 aaKnown RBP15.7■□□□□ 0.1
Rnf41-201ENSMUST00000096386 Anp32aO35381 247 aa15.68■□□□□ 0.1
Rnf41-201ENSMUST00000096386 Hdac5Q9Z2V6 1113 aa15.61■□□□□ 0.09
Rnf41-201ENSMUST00000096386 Pelp1Q9DBD5 1123 aaKnown RBP15.57■□□□□ 0.08
Rnf41-201ENSMUST00000096386 Atad2bE9Q166 1460 aaKnown RBP15.56■□□□□ 0.08
Rnf41-201ENSMUST00000096386 Cecr2E9Q2Z1 1453 aa15.56■□□□□ 0.08
Rnf41-201ENSMUST00000096386 Gab3Q8BSM5 595 aa15.52■□□□□ 0.08
Rnf41-201ENSMUST00000096386 TonslQ6NZL6 1363 aa15.51■□□□□ 0.07
Rnf41-201ENSMUST00000096386 Smarca2Q6DIC0 1577 aa15.48■□□□□ 0.07
Rnf41-201ENSMUST00000096386 Fgd1P52734 960 aa15.47■□□□□ 0.07
Rnf41-201ENSMUST00000096386 Rsf1E9PWW9 1441 aaKnown RBP15.44■□□□□ 0.06
Rnf41-201ENSMUST00000096386 Nolc1E9Q5C9 702 aaKnown RBP15.42■□□□□ 0.06
Rnf41-201ENSMUST00000096386 Smarca4Q3TKT4 1613 aaKnown RBP15.42■□□□□ 0.06
Rnf41-201ENSMUST00000096386 Ercc6F8VPZ5 1481 aa15.42■□□□□ 0.06
Rnf41-201ENSMUST00000096386 UbtfP25976 765 aaKnown RBP15.41■□□□□ 0.06
Rnf41-201ENSMUST00000096386 Chic1Q8CBW7 227 aa15.41■□□□□ 0.06
Rnf41-201ENSMUST00000096386 Ap3b1Q9Z1T1 1105 aa15.4■□□□□ 0.06
Rnf41-201ENSMUST00000096386 NrdcQ8BHG1 1161 aa15.39■□□□□ 0.05
Rnf41-201ENSMUST00000096386 Pknox2Q8BG99 474 aa15.37■□□□□ 0.05
Rnf41-201ENSMUST00000096386 Esf1Q3V1V3 845 aaKnown RBP15.35■□□□□ 0.05
Rnf41-201ENSMUST00000096386 Supt16hQ920B9 1047 aa15.34■□□□□ 0.05
Rnf41-201ENSMUST00000096386 Iqgap2Q3UQ44 1575 aa15.34■□□□□ 0.05
Rnf41-201ENSMUST00000096386 Znf710Q3U288 666 aa15.33■□□□□ 0.05
Rnf41-201ENSMUST00000096386 Gtf3c3Q3TMP1 882 aa15.33■□□□□ 0.04
Rnf41-201ENSMUST00000096386 Upf2A2AT37 1269 aaKnown RBP15.32■□□□□ 0.04
Rnf41-201ENSMUST00000096386 Thoc2B1AZI6 1594 aaKnown RBP15.31■□□□□ 0.04
Rnf41-201ENSMUST00000096386 Ttbk1Q6PCN3 1308 aa15.28■□□□□ 0.04
Rnf41-201ENSMUST00000096386 Calr4Q3TQS0 420 aa15.26■□□□□ 0.03
Rnf41-201ENSMUST00000096386 Brd4Q9ESU6 1400 aaKnown RBP15.25■□□□□ 0.03
Rnf41-201ENSMUST00000096386 Stra8P70278 393 aa15.25■□□□□ 0.03
Rnf41-201ENSMUST00000096386 Ubl4bQ9CQ84 188 aa15.25■□□□□ 0.03
Rnf41-201ENSMUST00000096386 Plcd4Q8K3R3 807 aa15.23■□□□□ 0.03
Rnf41-201ENSMUST00000096386 Ccdc9Q8VC31 543 aaKnown RBP15.23■□□□□ 0.03
Rnf41-201ENSMUST00000096386 Cc2d2aQ8CFW7 1633 aa15.23■□□□□ 0.03
Rnf41-201ENSMUST00000096386 Il27Q8K3I6 234 aa15.22■□□□□ 0.03
Rnf41-201ENSMUST00000096386 Ccdc27Q3V036 639 aa15.2■□□□□ 0.02
Rnf41-201ENSMUST00000096386 Frmpd1A2AKB4 1549 aa15.2■□□□□ 0.02
Rnf41-201ENSMUST00000096386 Irx3P81067 507 aa15.19■□□□□ 0.02
Rnf41-201ENSMUST00000096386 CftrP26361 1476 aa15.19■□□□□ 0.02
Rnf41-201ENSMUST00000096386 Ccdc88bQ4QRL3 1481 aa15.18■□□□□ 0.02
Rnf41-201ENSMUST00000096386 Phldb1Q6PDH0 1371 aaKnown RBP15.17■□□□□ 0.02
Rnf41-201ENSMUST00000096386 Wdr62Q3U3T8 1523 aa15.15■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 218.6 ms