RNA–Protein interactions for RNA: ENSMUST00000076807.6

Pcdhgc3-201, Transcript of Protocadherin gamma C3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhgc3, Length 4,687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3-201ENSMUST00000076807 Rhox8Q6VSS7 320 aa22.68■■□□□ 1.22
Pcdhgc3-201ENSMUST00000076807 Rpgrip1Q9EPQ2 1331 aa21.7■■□□□ 1.06
Pcdhgc3-201ENSMUST00000076807 NischQ80TM9 1593 aa20.78■□□□□ 0.92
Pcdhgc3-201ENSMUST00000076807 Ehmt2Q9Z148 1263 aaKnown RBP20.53■□□□□ 0.88
Pcdhgc3-201ENSMUST00000076807 Las1lA2BE28 776 aaKnown RBP20.42■□□□□ 0.86
Pcdhgc3-201ENSMUST00000076807 Ccdc136Q3TVA9 1136 aa20.26■□□□□ 0.83
Pcdhgc3-201ENSMUST00000076807 Cngb1E1AZ71 1325 aa20.18■□□□□ 0.82
Pcdhgc3-201ENSMUST00000076807 Acin1Q9JIX8 1338 aaKnown RBP20.17■□□□□ 0.82
Pcdhgc3-201ENSMUST00000076807 Ccdc180J3QNE4 1664 aa20.08■□□□□ 0.81
Pcdhgc3-201ENSMUST00000076807 Trim41Q5NCC3 630 aa20.06■□□□□ 0.8
Pcdhgc3-201ENSMUST00000076807 Rtl1Q7M732 1744 aa19.99■□□□□ 0.79
Pcdhgc3-201ENSMUST00000076807 Wdr66E9Q743 1299 aa19.89■□□□□ 0.77
Pcdhgc3-201ENSMUST00000076807 Zeb1Q64318 1117 aa19.86■□□□□ 0.77
Pcdhgc3-201ENSMUST00000076807 HrcG5E8J6 738 aa19.81■□□□□ 0.76
Pcdhgc3-201ENSMUST00000076807 Esf1Q3V1V3 845 aaKnown RBP19.79■□□□□ 0.76
Pcdhgc3-201ENSMUST00000076807 Gab3Q8BSM5 595 aa19.75■□□□□ 0.75
Pcdhgc3-201ENSMUST00000076807 NefmP08553 848 aa19.71■□□□□ 0.75
Pcdhgc3-201ENSMUST00000076807 Abcc9P70170 1546 aa19.6■□□□□ 0.73
Pcdhgc3-201ENSMUST00000076807 Pelp1Q9DBD5 1123 aaKnown RBP19.59■□□□□ 0.73
Pcdhgc3-201ENSMUST00000076807 Pcgf6Q99NA9 353 aa19.45■□□□□ 0.7
Pcdhgc3-201ENSMUST00000076807 CenpbP27790 599 aa19.44■□□□□ 0.7
Pcdhgc3-201ENSMUST00000076807 Npm2Q80W85 207 aa19.42■□□□□ 0.7
Pcdhgc3-201ENSMUST00000076807 Myt1lP97500 1187 aa19.3■□□□□ 0.68
Pcdhgc3-201ENSMUST00000076807 Ube2uB1AUC4 352 aa19.22■□□□□ 0.67
Pcdhgc3-201ENSMUST00000076807 UbtfP25976 765 aaKnown RBP19.19■□□□□ 0.66
Pcdhgc3-201ENSMUST00000076807 Stra8P70278 393 aa19.17■□□□□ 0.66
Pcdhgc3-201ENSMUST00000076807 Myt1Q8CFC2 1127 aa19.12■□□□□ 0.65
Pcdhgc3-201ENSMUST00000076807 Cdk11bP24788 784 aaKnown RBP19.1■□□□□ 0.65
Pcdhgc3-201ENSMUST00000076807 Abcc8B2RUS7 1588 aa19.06■□□□□ 0.64
Pcdhgc3-201ENSMUST00000076807 Supt5hO55201 1082 aaKnown RBP18.98■□□□□ 0.63
Pcdhgc3-201ENSMUST00000076807 Zcchc6Q5BLK4 1491 aaKnown RBP18.94■□□□□ 0.62
Pcdhgc3-201ENSMUST00000076807 Nop58Q6DFW4 536 aaKnown RBP18.9■□□□□ 0.62
Pcdhgc3-201ENSMUST00000076807 Tnnt3Q9QZ47 272 aa18.88■□□□□ 0.61
Pcdhgc3-201ENSMUST00000076807 Dcaf1Q80TR8 1506 aa18.83■□□□□ 0.6
Pcdhgc3-201ENSMUST00000076807 Mier1Q5UAK0 511 aa18.72■□□□□ 0.59
Pcdhgc3-201ENSMUST00000076807 TonslQ6NZL6 1363 aa18.68■□□□□ 0.58
Pcdhgc3-201ENSMUST00000076807 Slc24a1Q91WD8 1130 aa18.59■□□□□ 0.57
Pcdhgc3-201ENSMUST00000076807 Cep164Q5DU05 1446 aa18.55■□□□□ 0.56
Pcdhgc3-201ENSMUST00000076807 Gm35339A0A140LHH9 1649 aa18.55■□□□□ 0.56
Pcdhgc3-201ENSMUST00000076807 ClspnQ80YR7 1315 aa18.55■□□□□ 0.56
Pcdhgc3-201ENSMUST00000076807 NclP09405 707 aaKnown RBP18.52■□□□□ 0.56
Pcdhgc3-201ENSMUST00000076807 Amer1Q7TS75 1132 aa18.48■□□□□ 0.55
Pcdhgc3-201ENSMUST00000076807 Il27Q8K3I6 234 aa18.47■□□□□ 0.55
Pcdhgc3-201ENSMUST00000076807 Rtl5Q5DTT4 599 aa18.46■□□□□ 0.55
Pcdhgc3-201ENSMUST00000076807 Fam50aQ9WV03 339 aaKnown RBP18.46■□□□□ 0.55
Pcdhgc3-201ENSMUST00000076807 NrdcQ8BHG1 1161 aa18.45■□□□□ 0.54
Pcdhgc3-201ENSMUST00000076807 Neurod1Q60867 357 aa18.45■□□□□ 0.54
Pcdhgc3-201ENSMUST00000076807 Ppargc1bQ8VHJ7 1014 aa18.41■□□□□ 0.54
Pcdhgc3-201ENSMUST00000076807 Anks4bQ8K3X6 423 aa18.39■□□□□ 0.53
Pcdhgc3-201ENSMUST00000076807 Ap3b1Q9Z1T1 1105 aa18.37■□□□□ 0.53
Pcdhgc3-201ENSMUST00000076807 Anp32bQ9EST5 272 aaKnown RBP18.35■□□□□ 0.53
Pcdhgc3-201ENSMUST00000076807 Brd4Q9ESU6 1400 aaKnown RBP18.34■□□□□ 0.53
Pcdhgc3-201ENSMUST00000076807 Sall2Q9QX96 1004 aa18.32■□□□□ 0.52
Pcdhgc3-201ENSMUST00000076807 Rb1cc1Q9ESK9 1588 aa18.28■□□□□ 0.52
Pcdhgc3-201ENSMUST00000076807 NeflP08551 543 aa18.23■□□□□ 0.51
Pcdhgc3-201ENSMUST00000076807 Aplp2Q06335 707 aa18.22■□□□□ 0.51
Pcdhgc3-201ENSMUST00000076807 Anp32aO35381 247 aa18.21■□□□□ 0.51
Pcdhgc3-201ENSMUST00000076807 Eif5bQ05D44 1216 aaKnown RBP18.19■□□□□ 0.5
Pcdhgc3-201ENSMUST00000076807 Chic1Q8CBW7 227 aa18.17■□□□□ 0.5
Pcdhgc3-201ENSMUST00000076807 Plekhg3Q4VAC9 1341 aa18.17■□□□□ 0.5
Pcdhgc3-201ENSMUST00000076807 Ttbk1Q6PCN3 1308 aa18.13■□□□□ 0.49
Pcdhgc3-201ENSMUST00000076807 4933416C03RikQ3V063 378 aa18.13■□□□□ 0.49
Pcdhgc3-201ENSMUST00000076807 Csrnp3P59055 597 aa18.1■□□□□ 0.49
Pcdhgc3-201ENSMUST00000076807 Clip1Q922J3 1391 aa18.08■□□□□ 0.48
Pcdhgc3-201ENSMUST00000076807 DiexfQ8BTT6 772 aaKnown RBP18.01■□□□□ 0.47
Pcdhgc3-201ENSMUST00000076807 Ccer2J3QPU5 274 aa17.98■□□□□ 0.47
Pcdhgc3-201ENSMUST00000076807 Baz1aO88379 1555 aa17.97■□□□□ 0.47
Pcdhgc3-201ENSMUST00000076807 Lmod2Q3UHZ5 550 aa17.94■□□□□ 0.46
Pcdhgc3-201ENSMUST00000076807 Eid3Q3V124 375 aa17.9■□□□□ 0.46
Pcdhgc3-201ENSMUST00000076807 Npm1Q61937 292 aaKnown RBP17.89■□□□□ 0.45
Pcdhgc3-201ENSMUST00000076807 NacadQ5SWP3 1504 aa17.86■□□□□ 0.45
Pcdhgc3-201ENSMUST00000076807 Golga3P55937 1487 aa17.83■□□□□ 0.44
Pcdhgc3-201ENSMUST00000076807 Gm38655A0A286YDK6 273 aa17.81■□□□□ 0.44
Pcdhgc3-201ENSMUST00000076807 Os9Q8K2C7 672 aa17.79■□□□□ 0.44
Pcdhgc3-201ENSMUST00000076807 1700123L14RikQ3V2K7 440 aa17.78■□□□□ 0.44
Pcdhgc3-201ENSMUST00000076807 Calr4Q3TQS0 420 aa17.77■□□□□ 0.44
Pcdhgc3-201ENSMUST00000076807 Mapk8ip2Q9ERE9 830 aa17.76■□□□□ 0.43
Pcdhgc3-201ENSMUST00000076807 4930567H17RikQ3V0K5 233 aa17.74■□□□□ 0.43
Pcdhgc3-201ENSMUST00000076807 Aebp2Q9Z248 504 aaKnown RBP17.7■□□□□ 0.42
Pcdhgc3-201ENSMUST00000076807 DaxxO35613 739 aa17.65■□□□□ 0.42
Pcdhgc3-201ENSMUST00000076807 Rsf1E9PWW9 1441 aaKnown RBP17.65■□□□□ 0.42
Pcdhgc3-201ENSMUST00000076807 Wdr43Q6ZQL4 677 aaKnown RBP17.61■□□□□ 0.41
Pcdhgc3-201ENSMUST00000076807 Upf2A2AT37 1269 aaKnown RBP17.6■□□□□ 0.41
Pcdhgc3-201ENSMUST00000076807 BlmO88700 1416 aa17.6■□□□□ 0.41
Pcdhgc3-201ENSMUST00000076807 Ppp4r2Q0VGB7 417 aa17.6■□□□□ 0.41
Pcdhgc3-201ENSMUST00000076807 Hdac5Q9Z2V6 1113 aa17.58■□□□□ 0.41
Pcdhgc3-201ENSMUST00000076807 Setd5Q5XJV7 1441 aa17.58■□□□□ 0.41
Pcdhgc3-201ENSMUST00000076807 Ccdc9Q8VC31 543 aaKnown RBP17.54■□□□□ 0.4
Pcdhgc3-201ENSMUST00000076807 Mrs2Q5NCE8 434 aa17.53■□□□□ 0.4
Pcdhgc3-201ENSMUST00000076807 Eea1Q8BL66 1411 aa17.5■□□□□ 0.39
Pcdhgc3-201ENSMUST00000076807 Kdm5dQ62240 1548 aa17.49■□□□□ 0.39
Pcdhgc3-201ENSMUST00000076807 Hnrnpul2Q00PI9 745 aaKnown RBP17.45■□□□□ 0.38
Pcdhgc3-201ENSMUST00000076807 Fam71e1A1L3C1 212 aa17.45■□□□□ 0.38
Pcdhgc3-201ENSMUST00000076807 Nlrp6Q91WS2 869 aa17.44■□□□□ 0.38
Pcdhgc3-201ENSMUST00000076807 Zbtb7cQ8VCZ7 619 aa17.44■□□□□ 0.38
Pcdhgc3-201ENSMUST00000076807 Chic2Q9D9G3 165 aa17.39■□□□□ 0.37
Pcdhgc3-201ENSMUST00000076807 Ccdc88bQ4QRL3 1481 aa17.35■□□□□ 0.37
Pcdhgc3-201ENSMUST00000076807 Zbtb4Q5F293 982 aa17.34■□□□□ 0.37
Pcdhgc3-201ENSMUST00000076807 Hsp90aa1P07901 733 aaKnown RBP17.34■□□□□ 0.37
Pcdhgc3-201ENSMUST00000076807 Crybg2B7ZCC2 1516 aa17.32■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms