RNA–Protein interactions for RNA: ENSMUST00000071152.13

Rffl-202, Transcript of E3 ubiquitin-protein ligase rififylin, mousemouse

TSL 1 (best) BASIC

Gene Rffl, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rffl-202ENSMUST00000071152 Rhox8Q6VSS7 320 aa28.95■■■□□ 2.22
Rffl-202ENSMUST00000071152 NischQ80TM9 1593 aa28.68■■■□□ 2.18
Rffl-202ENSMUST00000071152 Abcc9P70170 1546 aa27.4■■□□□ 1.98
Rffl-202ENSMUST00000071152 Ehmt2Q9Z148 1263 aaKnown RBP26.97■■□□□ 1.91
Rffl-202ENSMUST00000071152 Abcc8B2RUS7 1588 aa26.86■■□□□ 1.89
Rffl-202ENSMUST00000071152 Gm35339A0A140LHH9 1649 aa26.74■■□□□ 1.87
Rffl-202ENSMUST00000071152 Ccdc136Q3TVA9 1136 aa26.72■■□□□ 1.87
Rffl-202ENSMUST00000071152 Ccdc180J3QNE4 1664 aa26.05■■□□□ 1.76
Rffl-202ENSMUST00000071152 Rtl1Q7M732 1744 aa25.94■■□□□ 1.74
Rffl-202ENSMUST00000071152 Rpgrip1Q9EPQ2 1331 aa25.83■■□□□ 1.73
Rffl-202ENSMUST00000071152 Trim41Q5NCC3 630 aa25.81■■□□□ 1.72
Rffl-202ENSMUST00000071152 Gab3Q8BSM5 595 aa25.62■■□□□ 1.69
Rffl-202ENSMUST00000071152 Acin1Q9JIX8 1338 aaKnown RBP25.61■■□□□ 1.69
Rffl-202ENSMUST00000071152 Cngb1E1AZ71 1325 aa25.55■■□□□ 1.68
Rffl-202ENSMUST00000071152 HrcG5E8J6 738 aa25.42■■□□□ 1.66
Rffl-202ENSMUST00000071152 Zcchc6Q5BLK4 1491 aaKnown RBP25.28■■□□□ 1.64
Rffl-202ENSMUST00000071152 Rb1cc1Q9ESK9 1588 aa25.16■■□□□ 1.62
Rffl-202ENSMUST00000071152 Esf1Q3V1V3 845 aaKnown RBP25.1■■□□□ 1.61
Rffl-202ENSMUST00000071152 Zeb1Q64318 1117 aa25.09■■□□□ 1.61
Rffl-202ENSMUST00000071152 Dcaf1Q80TR8 1506 aa25.05■■□□□ 1.6
Rffl-202ENSMUST00000071152 Pcgf6Q99NA9 353 aa25.03■■□□□ 1.6
Rffl-202ENSMUST00000071152 Chic1Q8CBW7 227 aa24.84■■□□□ 1.57
Rffl-202ENSMUST00000071152 Supt5hO55201 1082 aaKnown RBP24.78■■□□□ 1.56
Rffl-202ENSMUST00000071152 ScribQ80U72 1612 aa24.77■■□□□ 1.56
Rffl-202ENSMUST00000071152 Kdm5dQ62240 1548 aa24.71■■□□□ 1.55
Rffl-202ENSMUST00000071152 Myt1lP97500 1187 aa24.67■■□□□ 1.54
Rffl-202ENSMUST00000071152 Baz1aO88379 1555 aa24.64■■□□□ 1.53
Rffl-202ENSMUST00000071152 UbtfP25976 765 aaKnown RBP24.59■■□□□ 1.53
Rffl-202ENSMUST00000071152 Wdr66E9Q743 1299 aa24.47■■□□□ 1.51
Rffl-202ENSMUST00000071152 Ppargc1bQ8VHJ7 1014 aa24.47■■□□□ 1.51
Rffl-202ENSMUST00000071152 NacadQ5SWP3 1504 aa24.43■■□□□ 1.5
Rffl-202ENSMUST00000071152 Mier1Q5UAK0 511 aa24.42■■□□□ 1.5
Rffl-202ENSMUST00000071152 Cep164Q5DU05 1446 aa24.41■■□□□ 1.5
Rffl-202ENSMUST00000071152 Npm2Q80W85 207 aa24.35■■□□□ 1.49
Rffl-202ENSMUST00000071152 Rsf1E9PWW9 1441 aaKnown RBP24.26■■□□□ 1.47
Rffl-202ENSMUST00000071152 NefmP08553 848 aa24.15■■□□□ 1.46
Rffl-202ENSMUST00000071152 Las1lA2BE28 776 aaKnown RBP24.09■■□□□ 1.45
Rffl-202ENSMUST00000071152 Ccdc88bQ4QRL3 1481 aa24.08■■□□□ 1.45
Rffl-202ENSMUST00000071152 Il27Q8K3I6 234 aa24.06■■□□□ 1.44
Rffl-202ENSMUST00000071152 Neurod1Q60867 357 aa24.05■■□□□ 1.44
Rffl-202ENSMUST00000071152 Brd4Q9ESU6 1400 aaKnown RBP24.05■■□□□ 1.44
Rffl-202ENSMUST00000071152 Sall2Q9QX96 1004 aa24.03■■□□□ 1.44
Rffl-202ENSMUST00000071152 Cecr2E9Q2Z1 1453 aa24■■□□□ 1.43
Rffl-202ENSMUST00000071152 Ap3b1Q9Z1T1 1105 aa23.97■■□□□ 1.43
Rffl-202ENSMUST00000071152 Smarca2Q6DIC0 1577 aa23.93■■□□□ 1.42
Rffl-202ENSMUST00000071152 Plekhg3Q4VAC9 1341 aa23.92■■□□□ 1.42
Rffl-202ENSMUST00000071152 Golga3P55937 1487 aa23.84■■□□□ 1.41
Rffl-202ENSMUST00000071152 Sycp2Q9CUU3 1500 aa23.81■■□□□ 1.4
Rffl-202ENSMUST00000071152 Aebp2Q9Z248 504 aaKnown RBP23.72■■□□□ 1.39
Rffl-202ENSMUST00000071152 Eid3Q3V124 375 aa23.63■■□□□ 1.37
Rffl-202ENSMUST00000071152 Crybg2B7ZCC2 1516 aa23.61■■□□□ 1.37
Rffl-202ENSMUST00000071152 Synj1Q8CHC4 1574 aa23.6■■□□□ 1.37
Rffl-202ENSMUST00000071152 Nop58Q6DFW4 536 aaKnown RBP23.53■■□□□ 1.36
Rffl-202ENSMUST00000071152 Mapk8ip2Q9ERE9 830 aa23.51■■□□□ 1.35
Rffl-202ENSMUST00000071152 Cdk11bP24788 784 aaKnown RBP23.51■■□□□ 1.35
Rffl-202ENSMUST00000071152 TonslQ6NZL6 1363 aa23.5■■□□□ 1.35
Rffl-202ENSMUST00000071152 Gm38655A0A286YDK6 273 aa23.48■■□□□ 1.35
Rffl-202ENSMUST00000071152 Ube2uB1AUC4 352 aa23.46■■□□□ 1.35
Rffl-202ENSMUST00000071152 CftrP26361 1476 aa23.46■■□□□ 1.35
Rffl-202ENSMUST00000071152 Csrnp3P59055 597 aa23.45■■□□□ 1.34
Rffl-202ENSMUST00000071152 Clip1Q922J3 1391 aa23.44■■□□□ 1.34
Rffl-202ENSMUST00000071152 Fam50aQ9WV03 339 aaKnown RBP23.42■■□□□ 1.34
Rffl-202ENSMUST00000071152 Lmod2Q3UHZ5 550 aa23.39■■□□□ 1.33
Rffl-202ENSMUST00000071152 ClspnQ80YR7 1315 aa23.29■■□□□ 1.32
Rffl-202ENSMUST00000071152 Slc24a1Q91WD8 1130 aa23.18■■□□□ 1.3
Rffl-202ENSMUST00000071152 Cep162Q6ZQ06 1403 aa23.17■■□□□ 1.3
Rffl-202ENSMUST00000071152 Rapgef2Q8CHG7 1496 aa23.17■■□□□ 1.3
Rffl-202ENSMUST00000071152 BicraF8VPZ9 1578 aa23.15■■□□□ 1.3
Rffl-202ENSMUST00000071152 Anks4bQ8K3X6 423 aa23.14■■□□□ 1.29
Rffl-202ENSMUST00000071152 NclP09405 707 aaKnown RBP23.11■■□□□ 1.29
Rffl-202ENSMUST00000071152 1700123L14RikQ3V2K7 440 aa23.09■■□□□ 1.29
Rffl-202ENSMUST00000071152 Cc2d2aQ8CFW7 1633 aa23.08■■□□□ 1.29
Rffl-202ENSMUST00000071152 Fmn1Q05860 1466 aa22.99■■□□□ 1.27
Rffl-202ENSMUST00000071152 Setd5Q5XJV7 1441 aa22.96■■□□□ 1.27
Rffl-202ENSMUST00000071152 Kif15Q6P9L6 1387 aa22.93■■□□□ 1.26
Rffl-202ENSMUST00000071152 Cttnbp2B9EJA2 1648 aa22.93■■□□□ 1.26
Rffl-202ENSMUST00000071152 Npm1Q61937 292 aaKnown RBP22.92■■□□□ 1.26
Rffl-202ENSMUST00000071152 Smarca4Q3TKT4 1613 aaKnown RBP22.9■■□□□ 1.26
Rffl-202ENSMUST00000071152 BlmO88700 1416 aa22.89■■□□□ 1.26
Rffl-202ENSMUST00000071152 CenpbP27790 599 aa22.87■■□□□ 1.25
Rffl-202ENSMUST00000071152 Top2bQ64511 1612 aa22.8■■□□□ 1.24
Rffl-202ENSMUST00000071152 Chic2Q9D9G3 165 aa22.78■■□□□ 1.24
Rffl-202ENSMUST00000071152 Ubl4bQ9CQ84 188 aa22.77■■□□□ 1.24
Rffl-202ENSMUST00000071152 Eea1Q8BL66 1411 aa22.76■■□□□ 1.23
Rffl-202ENSMUST00000071152 Top2aQ01320 1528 aaKnown RBP22.7■■□□□ 1.22
Rffl-202ENSMUST00000071152 SafbD3YXK2 937 aaKnown RBP22.69■■□□□ 1.22
Rffl-202ENSMUST00000071152 Iqgap2Q3UQ44 1575 aa22.68■■□□□ 1.22
Rffl-202ENSMUST00000071152 Eif5bQ05D44 1216 aaKnown RBP22.65■■□□□ 1.22
Rffl-202ENSMUST00000071152 PtprkP35822 1457 aa22.65■■□□□ 1.22
Rffl-202ENSMUST00000071152 Hnrnpul2Q00PI9 745 aaKnown RBP22.63■■□□□ 1.21
Rffl-202ENSMUST00000071152 Hspa5P20029 655 aaKnown RBP22.61■■□□□ 1.21
Rffl-202ENSMUST00000071152 Atad2bE9Q166 1460 aaKnown RBP22.54■■□□□ 1.2
Rffl-202ENSMUST00000071152 Zbtb7cQ8VCZ7 619 aa22.53■■□□□ 1.2
Rffl-202ENSMUST00000071152 Aplp2Q06335 707 aa22.51■■□□□ 1.19
Rffl-202ENSMUST00000071152 Pds5bQ4VA53 1446 aaKnown RBP22.49■■□□□ 1.19
Rffl-202ENSMUST00000071152 Arhgap35Q91YM2 1499 aa22.49■■□□□ 1.19
Rffl-202ENSMUST00000071152 Sin3aQ60520 1274 aaKnown RBP22.49■■□□□ 1.19
Rffl-202ENSMUST00000071152 Arap1Q4LDD4 1452 aa22.46■■□□□ 1.19
Rffl-202ENSMUST00000071152 Zbtb4Q5F293 982 aa22.43■■□□□ 1.18
Rffl-202ENSMUST00000071152 Baz1bQ9Z277 1479 aa22.43■■□□□ 1.18
Retrieved 100 of 22,080 RNA–protein pairs in 68.7 ms