RNA–Protein interactions for RNA: ENSMUST00000053168.3

Ttc39d-201, Transcript of Tetratricopeptide repeat domain 39D, mousemouse

APPRIS P1 BASIC

Gene Ttc39d, Length 2,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39d-201ENSMUST00000053168 Mapk8ip2Q9ERE9 830 aa18.2■□□□□ 0.5
Ttc39d-201ENSMUST00000053168 Chic1Q8CBW7 227 aa17.55■□□□□ 0.4
Ttc39d-201ENSMUST00000053168 Phf23Q8BSN5 401 aa15.5■□□□□ 0.07
Ttc39d-201ENSMUST00000053168 Gab3Q8BSM5 595 aa14.63□□□□□ -0.07
Ttc39d-201ENSMUST00000053168 Plppr3Q7TPB0 716 aa14.19□□□□□ -0.14
Ttc39d-201ENSMUST00000053168 Fam163aQ8CAA5 168 aa13.98□□□□□ -0.17
Ttc39d-201ENSMUST00000053168 Senp3Q9EP97 568 aaKnown RBP13.83□□□□□ -0.2
Ttc39d-201ENSMUST00000053168 GapdhsQ64467 440 aa12.9□□□□□ -0.34
Ttc39d-201ENSMUST00000053168 ArsiQ32KI9 573 aa12.76□□□□□ -0.37
Ttc39d-201ENSMUST00000053168 Hoxd11P23813 323 aa12.62□□□□□ -0.39
Ttc39d-201ENSMUST00000053168 Slc34a2Q9DBP0 697 aa12.47□□□□□ -0.41
Ttc39d-201ENSMUST00000053168 Znf219Q6IQX8 726 aa12.41□□□□□ -0.42
Ttc39d-201ENSMUST00000053168 Trap1aP19473 224 aa12.31□□□□□ -0.44
Ttc39d-201ENSMUST00000053168 Kcna4Q61423 654 aa12.03□□□□□ -0.48
Ttc39d-201ENSMUST00000053168 Dnajc5bQ9CQ94 199 aa12.02□□□□□ -0.49
Ttc39d-201ENSMUST00000053168 Chrna2Q91X60 512 aa11.81□□□□□ -0.52
Ttc39d-201ENSMUST00000053168 Rsph4aQ8BYM7 716 aa11.79□□□□□ -0.52
Ttc39d-201ENSMUST00000053168 Akt1s1Q9D1F4 257 aa11.78□□□□□ -0.52
Ttc39d-201ENSMUST00000053168 Rimbp2Q80U40 1072 aa11.61□□□□□ -0.55
Ttc39d-201ENSMUST00000053168 Znf704Q9ERQ3 566 aa11.35□□□□□ -0.59
Ttc39d-201ENSMUST00000053168 Slc4a5E9Q3M5 1116 aa11.34□□□□□ -0.59
Ttc39d-201ENSMUST00000053168 Cacnb1Q8R3Z5 597 aa11.06□□□□□ -0.64
Ttc39d-201ENSMUST00000053168 Sox12Q04890 314 aa10.76□□□□□ -0.69
Ttc39d-201ENSMUST00000053168 Dmrt2Q8BG36 561 aa10.71□□□□□ -0.69
Ttc39d-201ENSMUST00000053168 Znf703P0CL69 594 aa10.7□□□□□ -0.7
Ttc39d-201ENSMUST00000053168 Ildr2B5TVM2 661 aa10.62□□□□□ -0.71
Ttc39d-201ENSMUST00000053168 Hs6st3Q9QYK4 470 aa10.58□□□□□ -0.72
Ttc39d-201ENSMUST00000053168 Bach1P97302 739 aa10.51□□□□□ -0.73
Ttc39d-201ENSMUST00000053168 Ppp4r2Q0VGB7 417 aa10.51□□□□□ -0.73
Ttc39d-201ENSMUST00000053168 Grwd1Q810D6 446 aaKnown RBP10.5□□□□□ -0.73
Ttc39d-201ENSMUST00000053168 Atf5O70191 283 aa10.48□□□□□ -0.73
Ttc39d-201ENSMUST00000053168 Kcnn1Q9EQR3 537 aa10.46□□□□□ -0.73
Ttc39d-201ENSMUST00000053168 NischQ80TM9 1593 aa10.45□□□□□ -0.74
Ttc39d-201ENSMUST00000053168 Prr29B1ARI9 187 aa10.45□□□□□ -0.74
Ttc39d-201ENSMUST00000053168 Egfem1Q8C088 590 aa10.43□□□□□ -0.74
Ttc39d-201ENSMUST00000053168 Gm35339A0A140LHH9 1649 aa10.34□□□□□ -0.75
Ttc39d-201ENSMUST00000053168 Zbtb7aO88939 569 aaKnown RBP10.28□□□□□ -0.76
Ttc39d-201ENSMUST00000053168 Ifnlr1Q8CGK5 535 aa10.23□□□□□ -0.77
Ttc39d-201ENSMUST00000053168 Abcc9P70170 1546 aa10.17□□□□□ -0.78
Ttc39d-201ENSMUST00000053168 Ppargc1bQ8VHJ7 1014 aa10.16□□□□□ -0.78
Ttc39d-201ENSMUST00000053168 Slc4a1apE9PX68 744 aa10.16□□□□□ -0.78
Ttc39d-201ENSMUST00000053168 Rnf216P58283 853 aa10.14□□□□□ -0.79
Ttc39d-201ENSMUST00000053168 WdpcpQ8C456 722 aa10.11□□□□□ -0.79
Ttc39d-201ENSMUST00000053168 Clcn6O35454 870 aa10.09□□□□□ -0.79
Ttc39d-201ENSMUST00000053168 Abcb7Q61102 752 aaKnown RBP10.07□□□□□ -0.8
Ttc39d-201ENSMUST00000053168 Abcc8B2RUS7 1588 aa10□□□□□ -0.81
Ttc39d-201ENSMUST00000053168 G430095P16RikE9Q913 147 aa9.98□□□□□ -0.81
Ttc39d-201ENSMUST00000053168 Pip4p2Q9CZX7 257 aa9.98□□□□□ -0.81
Ttc39d-201ENSMUST00000053168 Zbtb12Q9Z150 459 aa9.93□□□□□ -0.82
Ttc39d-201ENSMUST00000053168 Nkx1-1G3UXB3 402 aa9.89□□□□□ -0.83
Ttc39d-201ENSMUST00000053168 Cdca7Q9D0M2 382 aa9.87□□□□□ -0.83
Ttc39d-201ENSMUST00000053168 Kank3Q9Z1P7 791 aa9.85□□□□□ -0.83
Ttc39d-201ENSMUST00000053168 Gtpbp6Q3U6U5 514 aa9.78□□□□□ -0.84
Ttc39d-201ENSMUST00000053168 1700123L14RikQ3V2K7 440 aa9.77□□□□□ -0.85
Ttc39d-201ENSMUST00000053168 Evx2P49749 475 aa9.65□□□□□ -0.86
Ttc39d-201ENSMUST00000053168 Foxp4Q9DBY0 795 aaKnown RBP9.65□□□□□ -0.86
Ttc39d-201ENSMUST00000053168 Pitpnm1O35954 1243 aa9.61□□□□□ -0.87
Ttc39d-201ENSMUST00000053168 ArntlQ9WTL8 632 aa9.55□□□□□ -0.88
Ttc39d-201ENSMUST00000053168 Rhox8Q6VSS7 320 aa9.52□□□□□ -0.89
Ttc39d-201ENSMUST00000053168 Trim35Q8C006 501 aa9.52□□□□□ -0.89
Ttc39d-201ENSMUST00000053168 C1qtnf12Q8R2Z0 308 aa9.41□□□□□ -0.9
Ttc39d-201ENSMUST00000053168 ScribQ80U72 1612 aa9.39□□□□□ -0.91
Ttc39d-201ENSMUST00000053168 Dcaf1Q80TR8 1506 aa9.25□□□□□ -0.93
Ttc39d-201ENSMUST00000053168 Fxr2Q9WVR4 673 aaKnown RBP9.25□□□□□ -0.93
Ttc39d-201ENSMUST00000053168 Rtl1Q7M732 1744 aa9.25□□□□□ -0.93
Ttc39d-201ENSMUST00000053168 Lhx8O35652 367 aa9.21□□□□□ -0.93
Ttc39d-201ENSMUST00000053168 Zcchc6Q5BLK4 1491 aaKnown RBP9.19□□□□□ -0.94
Ttc39d-201ENSMUST00000053168 Dok7Q18PE0 504 aa9.19□□□□□ -0.94
Ttc39d-201ENSMUST00000053168 Krtap4-1Q3UUY3 169 aa9.17□□□□□ -0.94
Ttc39d-201ENSMUST00000053168 Ms4a5Q810P8 197 aa9.15□□□□□ -0.94
Ttc39d-201ENSMUST00000053168 Nlrp6Q91WS2 869 aa9.15□□□□□ -0.94
Ttc39d-201ENSMUST00000053168 Kdm5dQ62240 1548 aa9.15□□□□□ -0.94
Ttc39d-201ENSMUST00000053168 Trim41Q5NCC3 630 aa9.15□□□□□ -0.94
Ttc39d-201ENSMUST00000053168 Rb1cc1Q9ESK9 1588 aa9.13□□□□□ -0.95
Ttc39d-201ENSMUST00000053168 Ccdc180J3QNE4 1664 aa9.12□□□□□ -0.95
Ttc39d-201ENSMUST00000053168 Fam71e1A1L3C1 212 aa9.1□□□□□ -0.95
Ttc39d-201ENSMUST00000053168 Ube2uB1AUC4 352 aa9.08□□□□□ -0.96
Ttc39d-201ENSMUST00000053168 Npm2Q80W85 207 aa9.07□□□□□ -0.96
Ttc39d-201ENSMUST00000053168 Fbln2P37889 1221 aa9.07□□□□□ -0.96
Ttc39d-201ENSMUST00000053168 Gjc2Q8BQU6 440 aa9.06□□□□□ -0.96
Ttc39d-201ENSMUST00000053168 Ehmt2Q9Z148 1263 aaKnown RBP9.06□□□□□ -0.96
Ttc39d-201ENSMUST00000053168 NacadQ5SWP3 1504 aa9.04□□□□□ -0.96
Ttc39d-201ENSMUST00000053168 Baz1aO88379 1555 aa9.03□□□□□ -0.96
Ttc39d-201ENSMUST00000053168 Kiaa1522A2A7S8 1013 aa9.02□□□□□ -0.97
Ttc39d-201ENSMUST00000053168 Riok3Q9DBU3 519 aaKnown RBP9.01□□□□□ -0.97
Ttc39d-201ENSMUST00000053168 Cadps2Q8BYR5 1297 aa9□□□□□ -0.97
Ttc39d-201ENSMUST00000053168 Nyap1Q6PFX7 833 aa8.98□□□□□ -0.97
Ttc39d-201ENSMUST00000053168 SnphQ80U23 495 aa8.97□□□□□ -0.97
Ttc39d-201ENSMUST00000053168 DiexfQ8BTT6 772 aaKnown RBP8.97□□□□□ -0.97
Ttc39d-201ENSMUST00000053168 MyclP10166 368 aa8.95□□□□□ -0.98
Ttc39d-201ENSMUST00000053168 AcrbpQ3V140 540 aa8.95□□□□□ -0.98
Ttc39d-201ENSMUST00000053168 Skida1Q80YR3 822 aa8.93□□□□□ -0.98
Ttc39d-201ENSMUST00000053168 Rnf225Q9D7D1 332 aa8.92□□□□□ -0.98
Ttc39d-201ENSMUST00000053168 Ccdc136Q3TVA9 1136 aa8.92□□□□□ -0.98
Ttc39d-201ENSMUST00000053168 Map3k10Q66L42 940 aa8.91□□□□□ -0.98
Ttc39d-201ENSMUST00000053168 Sycp2Q9CUU3 1500 aa8.89□□□□□ -0.99
Ttc39d-201ENSMUST00000053168 Crybg2B7ZCC2 1516 aa8.88□□□□□ -0.99
Ttc39d-201ENSMUST00000053168 Npm3Q9CPP0 175 aaKnown RBP8.87□□□□□ -0.99
Ttc39d-201ENSMUST00000053168 Smarca2Q6DIC0 1577 aa8.85□□□□□ -0.99
Ttc39d-201ENSMUST00000053168 Prm3Q62100 101 aa8.85□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 170.2 ms