RNA–Protein interactions for RNA: ENSMUST00000041730.10

Lmx1b-201, Transcript of LIM homeobox transcription factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lmx1b, Length 4,790 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1b-201ENSMUST00000041730 Rhox8Q6VSS7 320 aa24.59■■□□□ 1.53
Lmx1b-201ENSMUST00000041730 Rpgrip1Q9EPQ2 1331 aa23.33■■□□□ 1.32
Lmx1b-201ENSMUST00000041730 NischQ80TM9 1593 aa22.66■■□□□ 1.22
Lmx1b-201ENSMUST00000041730 Ehmt2Q9Z148 1263 aaKnown RBP22.59■■□□□ 1.21
Lmx1b-201ENSMUST00000041730 Ccdc136Q3TVA9 1136 aa22.11■■□□□ 1.13
Lmx1b-201ENSMUST00000041730 Las1lA2BE28 776 aaKnown RBP22.11■■□□□ 1.13
Lmx1b-201ENSMUST00000041730 Acin1Q9JIX8 1338 aaKnown RBP21.96■■□□□ 1.11
Lmx1b-201ENSMUST00000041730 Cngb1E1AZ71 1325 aa21.95■■□□□ 1.1
Lmx1b-201ENSMUST00000041730 Ccdc180J3QNE4 1664 aa21.77■■□□□ 1.08
Lmx1b-201ENSMUST00000041730 Trim41Q5NCC3 630 aa21.72■■□□□ 1.07
Lmx1b-201ENSMUST00000041730 Zeb1Q64318 1117 aa21.66■■□□□ 1.06
Lmx1b-201ENSMUST00000041730 Rtl1Q7M732 1744 aa21.61■■□□□ 1.05
Lmx1b-201ENSMUST00000041730 Wdr66E9Q743 1299 aa21.56■■□□□ 1.04
Lmx1b-201ENSMUST00000041730 Gab3Q8BSM5 595 aa21.53■■□□□ 1.04
Lmx1b-201ENSMUST00000041730 HrcG5E8J6 738 aa21.45■■□□□ 1.03
Lmx1b-201ENSMUST00000041730 Abcc9P70170 1546 aa21.4■■□□□ 1.02
Lmx1b-201ENSMUST00000041730 Pelp1Q9DBD5 1123 aaKnown RBP21.38■■□□□ 1.01
Lmx1b-201ENSMUST00000041730 Esf1Q3V1V3 845 aaKnown RBP21.37■■□□□ 1.01
Lmx1b-201ENSMUST00000041730 Pcgf6Q99NA9 353 aa21.33■■□□□ 1.01
Lmx1b-201ENSMUST00000041730 NefmP08553 848 aa21.25■□□□□ 0.99
Lmx1b-201ENSMUST00000041730 Myt1lP97500 1187 aa20.95■□□□□ 0.94
Lmx1b-201ENSMUST00000041730 Npm2Q80W85 207 aa20.95■□□□□ 0.94
Lmx1b-201ENSMUST00000041730 CenpbP27790 599 aa20.95■□□□□ 0.94
Lmx1b-201ENSMUST00000041730 UbtfP25976 765 aaKnown RBP20.9■□□□□ 0.94
Lmx1b-201ENSMUST00000041730 Supt5hO55201 1082 aaKnown RBP20.86■□□□□ 0.93
Lmx1b-201ENSMUST00000041730 Abcc8B2RUS7 1588 aa20.83■□□□□ 0.93
Lmx1b-201ENSMUST00000041730 Myt1Q8CFC2 1127 aa20.82■□□□□ 0.92
Lmx1b-201ENSMUST00000041730 Ube2uB1AUC4 352 aa20.71■□□□□ 0.91
Lmx1b-201ENSMUST00000041730 Cdk11bP24788 784 aaKnown RBP20.71■□□□□ 0.91
Lmx1b-201ENSMUST00000041730 Zcchc6Q5BLK4 1491 aaKnown RBP20.58■□□□□ 0.89
Lmx1b-201ENSMUST00000041730 Nop58Q6DFW4 536 aaKnown RBP20.53■□□□□ 0.88
Lmx1b-201ENSMUST00000041730 Stra8P70278 393 aa20.51■□□□□ 0.87
Lmx1b-201ENSMUST00000041730 Dcaf1Q80TR8 1506 aa20.5■□□□□ 0.87
Lmx1b-201ENSMUST00000041730 Mier1Q5UAK0 511 aa20.46■□□□□ 0.87
Lmx1b-201ENSMUST00000041730 Ppargc1bQ8VHJ7 1014 aa20.33■□□□□ 0.84
Lmx1b-201ENSMUST00000041730 Neurod1Q60867 357 aa20.31■□□□□ 0.84
Lmx1b-201ENSMUST00000041730 Gm35339A0A140LHH9 1649 aa20.28■□□□□ 0.84
Lmx1b-201ENSMUST00000041730 Tnnt3Q9QZ47 272 aa20.27■□□□□ 0.84
Lmx1b-201ENSMUST00000041730 TonslQ6NZL6 1363 aa20.25■□□□□ 0.83
Lmx1b-201ENSMUST00000041730 Slc24a1Q91WD8 1130 aa20.22■□□□□ 0.83
Lmx1b-201ENSMUST00000041730 Amer1Q7TS75 1132 aa20.18■□□□□ 0.82
Lmx1b-201ENSMUST00000041730 Cep164Q5DU05 1446 aa20.16■□□□□ 0.82
Lmx1b-201ENSMUST00000041730 ClspnQ80YR7 1315 aa20.12■□□□□ 0.81
Lmx1b-201ENSMUST00000041730 Sall2Q9QX96 1004 aa20.11■□□□□ 0.81
Lmx1b-201ENSMUST00000041730 Il27Q8K3I6 234 aa20.06■□□□□ 0.8
Lmx1b-201ENSMUST00000041730 NclP09405 707 aaKnown RBP20.05■□□□□ 0.8
Lmx1b-201ENSMUST00000041730 Anks4bQ8K3X6 423 aa20.04■□□□□ 0.8
Lmx1b-201ENSMUST00000041730 Ap3b1Q9Z1T1 1105 aa20.02■□□□□ 0.8
Lmx1b-201ENSMUST00000041730 Fam50aQ9WV03 339 aaKnown RBP20.02■□□□□ 0.79
Lmx1b-201ENSMUST00000041730 Chic1Q8CBW7 227 aa19.96■□□□□ 0.79
Lmx1b-201ENSMUST00000041730 Rtl5Q5DTT4 599 aa19.94■□□□□ 0.78
Lmx1b-201ENSMUST00000041730 Rb1cc1Q9ESK9 1588 aa19.93■□□□□ 0.78
Lmx1b-201ENSMUST00000041730 Csrnp3P59055 597 aa19.92■□□□□ 0.78
Lmx1b-201ENSMUST00000041730 NrdcQ8BHG1 1161 aa19.85■□□□□ 0.77
Lmx1b-201ENSMUST00000041730 Plekhg3Q4VAC9 1341 aa19.85■□□□□ 0.77
Lmx1b-201ENSMUST00000041730 Brd4Q9ESU6 1400 aaKnown RBP19.82■□□□□ 0.76
Lmx1b-201ENSMUST00000041730 Aplp2Q06335 707 aa19.8■□□□□ 0.76
Lmx1b-201ENSMUST00000041730 Eif5bQ05D44 1216 aaKnown RBP19.78■□□□□ 0.76
Lmx1b-201ENSMUST00000041730 Ttbk1Q6PCN3 1308 aa19.75■□□□□ 0.75
Lmx1b-201ENSMUST00000041730 Gm38655A0A286YDK6 273 aa19.71■□□□□ 0.75
Lmx1b-201ENSMUST00000041730 Anp32aO35381 247 aa19.68■□□□□ 0.74
Lmx1b-201ENSMUST00000041730 4930567H17RikQ3V0K5 233 aa19.64■□□□□ 0.73
Lmx1b-201ENSMUST00000041730 Eid3Q3V124 375 aa19.63■□□□□ 0.73
Lmx1b-201ENSMUST00000041730 Clip1Q922J3 1391 aa19.62■□□□□ 0.73
Lmx1b-201ENSMUST00000041730 Anp32bQ9EST5 272 aaKnown RBP19.59■□□□□ 0.73
Lmx1b-201ENSMUST00000041730 4933416C03RikQ3V063 378 aa19.58■□□□□ 0.73
Lmx1b-201ENSMUST00000041730 1700123L14RikQ3V2K7 440 aa19.58■□□□□ 0.73
Lmx1b-201ENSMUST00000041730 DiexfQ8BTT6 772 aaKnown RBP19.58■□□□□ 0.72
Lmx1b-201ENSMUST00000041730 Baz1aO88379 1555 aa19.56■□□□□ 0.72
Lmx1b-201ENSMUST00000041730 Mapk8ip2Q9ERE9 830 aa19.55■□□□□ 0.72
Lmx1b-201ENSMUST00000041730 NeflP08551 543 aa19.55■□□□□ 0.72
Lmx1b-201ENSMUST00000041730 Lmod2Q3UHZ5 550 aa19.54■□□□□ 0.72
Lmx1b-201ENSMUST00000041730 Aebp2Q9Z248 504 aaKnown RBP19.5■□□□□ 0.71
Lmx1b-201ENSMUST00000041730 Golga3P55937 1487 aa19.37■□□□□ 0.69
Lmx1b-201ENSMUST00000041730 NacadQ5SWP3 1504 aa19.37■□□□□ 0.69
Lmx1b-201ENSMUST00000041730 Rsf1E9PWW9 1441 aaKnown RBP19.36■□□□□ 0.69
Lmx1b-201ENSMUST00000041730 Calr4Q3TQS0 420 aa19.31■□□□□ 0.68
Lmx1b-201ENSMUST00000041730 Ccer2J3QPU5 274 aa19.29■□□□□ 0.68
Lmx1b-201ENSMUST00000041730 Npm1Q61937 292 aaKnown RBP19.28■□□□□ 0.68
Lmx1b-201ENSMUST00000041730 Ppp4r2Q0VGB7 417 aa19.16■□□□□ 0.66
Lmx1b-201ENSMUST00000041730 Fam71e1A1L3C1 212 aa19.14■□□□□ 0.65
Lmx1b-201ENSMUST00000041730 Os9Q8K2C7 672 aa19.13■□□□□ 0.65
Lmx1b-201ENSMUST00000041730 Kdm5dQ62240 1548 aa19.13■□□□□ 0.65
Lmx1b-201ENSMUST00000041730 BlmO88700 1416 aa19.12■□□□□ 0.65
Lmx1b-201ENSMUST00000041730 DaxxO35613 739 aa19.1■□□□□ 0.65
Lmx1b-201ENSMUST00000041730 Wdr43Q6ZQL4 677 aaKnown RBP19.09■□□□□ 0.65
Lmx1b-201ENSMUST00000041730 Setd5Q5XJV7 1441 aa19.08■□□□□ 0.65
Lmx1b-201ENSMUST00000041730 Ccdc88bQ4QRL3 1481 aa19.06■□□□□ 0.64
Lmx1b-201ENSMUST00000041730 Mrs2Q5NCE8 434 aa19.04■□□□□ 0.64
Lmx1b-201ENSMUST00000041730 Hnrnpul2Q00PI9 745 aaKnown RBP18.99■□□□□ 0.63
Lmx1b-201ENSMUST00000041730 Zbtb7cQ8VCZ7 619 aa18.99■□□□□ 0.63
Lmx1b-201ENSMUST00000041730 Ccdc9Q8VC31 543 aaKnown RBP18.98■□□□□ 0.63
Lmx1b-201ENSMUST00000041730 Chic2Q9D9G3 165 aa18.96■□□□□ 0.63
Lmx1b-201ENSMUST00000041730 Eea1Q8BL66 1411 aa18.96■□□□□ 0.62
Lmx1b-201ENSMUST00000041730 Zbtb4Q5F293 982 aa18.94■□□□□ 0.62
Lmx1b-201ENSMUST00000041730 SafbD3YXK2 937 aaKnown RBP18.92■□□□□ 0.62
Lmx1b-201ENSMUST00000041730 Upf2A2AT37 1269 aaKnown RBP18.85■□□□□ 0.61
Lmx1b-201ENSMUST00000041730 Cep162Q6ZQ06 1403 aa18.83■□□□□ 0.61
Lmx1b-201ENSMUST00000041730 Nlrp6Q91WS2 869 aa18.77■□□□□ 0.6
Lmx1b-201ENSMUST00000041730 Crybg2B7ZCC2 1516 aa18.76■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 50.3 ms