RNA–Protein interactions for RNA: ENSMUST00000040089.4

Rnf43-201, Transcript of E3 ubiquitin-protein ligase RNF43, mousemouse

TSL 1 (best) BASIC

Gene Rnf43, Length 3,670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43-201ENSMUST00000040089 Rhox8Q6VSS7 320 aa17.27■□□□□ 0.36
Rnf43-201ENSMUST00000040089 NischQ80TM9 1593 aa16.84■□□□□ 0.29
Rnf43-201ENSMUST00000040089 Abcc9P70170 1546 aa15.92■□□□□ 0.14
Rnf43-201ENSMUST00000040089 Ccdc136Q3TVA9 1136 aa15.83■□□□□ 0.12
Rnf43-201ENSMUST00000040089 Abcc8B2RUS7 1588 aa15.76■□□□□ 0.11
Rnf43-201ENSMUST00000040089 Gm35339A0A140LHH9 1649 aa15.6■□□□□ 0.09
Rnf43-201ENSMUST00000040089 Ehmt2Q9Z148 1263 aaKnown RBP15.48■□□□□ 0.07
Rnf43-201ENSMUST00000040089 Rpgrip1Q9EPQ2 1331 aa15.39■□□□□ 0.05
Rnf43-201ENSMUST00000040089 Esf1Q3V1V3 845 aaKnown RBP15.33■□□□□ 0.04
Rnf43-201ENSMUST00000040089 Cngb1E1AZ71 1325 aa15.28■□□□□ 0.04
Rnf43-201ENSMUST00000040089 Trim41Q5NCC3 630 aa15.13■□□□□ 0.01
Rnf43-201ENSMUST00000040089 Zcchc6Q5BLK4 1491 aaKnown RBP15.13■□□□□ 0.01
Rnf43-201ENSMUST00000040089 Gab3Q8BSM5 595 aa15.07■□□□□ 0
Rnf43-201ENSMUST00000040089 Acin1Q9JIX8 1338 aaKnown RBP14.78□□□□□ -0.04
Rnf43-201ENSMUST00000040089 Rtl1Q7M732 1744 aa14.77□□□□□ -0.04
Rnf43-201ENSMUST00000040089 Ccdc180J3QNE4 1664 aa14.76□□□□□ -0.05
Rnf43-201ENSMUST00000040089 Il27Q8K3I6 234 aa14.76□□□□□ -0.05
Rnf43-201ENSMUST00000040089 Rb1cc1Q9ESK9 1588 aa14.74□□□□□ -0.05
Rnf43-201ENSMUST00000040089 Myt1lP97500 1187 aa14.72□□□□□ -0.05
Rnf43-201ENSMUST00000040089 Zeb1Q64318 1117 aa14.72□□□□□ -0.05
Rnf43-201ENSMUST00000040089 Npm2Q80W85 207 aa14.7□□□□□ -0.06
Rnf43-201ENSMUST00000040089 NacadQ5SWP3 1504 aa14.68□□□□□ -0.06
Rnf43-201ENSMUST00000040089 Kdm5dQ62240 1548 aa14.66□□□□□ -0.06
Rnf43-201ENSMUST00000040089 ScribQ80U72 1612 aa14.59□□□□□ -0.07
Rnf43-201ENSMUST00000040089 Pcgf6Q99NA9 353 aa14.54□□□□□ -0.08
Rnf43-201ENSMUST00000040089 HrcG5E8J6 738 aa14.4□□□□□ -0.1
Rnf43-201ENSMUST00000040089 Baz1aO88379 1555 aa14.4□□□□□ -0.1
Rnf43-201ENSMUST00000040089 Dcaf1Q80TR8 1506 aa14.36□□□□□ -0.11
Rnf43-201ENSMUST00000040089 Chic1Q8CBW7 227 aa14.32□□□□□ -0.12
Rnf43-201ENSMUST00000040089 Brd4Q9ESU6 1400 aaKnown RBP14.27□□□□□ -0.13
Rnf43-201ENSMUST00000040089 UbtfP25976 765 aaKnown RBP14.24□□□□□ -0.13
Rnf43-201ENSMUST00000040089 Sycp2Q9CUU3 1500 aa14.23□□□□□ -0.13
Rnf43-201ENSMUST00000040089 Ap3b1Q9Z1T1 1105 aa14.23□□□□□ -0.13
Rnf43-201ENSMUST00000040089 Npm1Q61937 292 aaKnown RBP14.2□□□□□ -0.14
Rnf43-201ENSMUST00000040089 Ubl4bQ9CQ84 188 aa14.19□□□□□ -0.14
Rnf43-201ENSMUST00000040089 Las1lA2BE28 776 aaKnown RBP14.18□□□□□ -0.14
Rnf43-201ENSMUST00000040089 Wdr66E9Q743 1299 aa14.17□□□□□ -0.14
Rnf43-201ENSMUST00000040089 Ube2uB1AUC4 352 aa14.16□□□□□ -0.14
Rnf43-201ENSMUST00000040089 Supt5hO55201 1082 aaKnown RBP14.14□□□□□ -0.15
Rnf43-201ENSMUST00000040089 Cecr2E9Q2Z1 1453 aa14.08□□□□□ -0.16
Rnf43-201ENSMUST00000040089 Ppargc1bQ8VHJ7 1014 aa14.04□□□□□ -0.16
Rnf43-201ENSMUST00000040089 Neurod1Q60867 357 aa13.98□□□□□ -0.17
Rnf43-201ENSMUST00000040089 Plekhg3Q4VAC9 1341 aa13.92□□□□□ -0.18
Rnf43-201ENSMUST00000040089 Lmod2Q3UHZ5 550 aa13.92□□□□□ -0.18
Rnf43-201ENSMUST00000040089 Kif15Q6P9L6 1387 aa13.91□□□□□ -0.18
Rnf43-201ENSMUST00000040089 Golga3P55937 1487 aa13.88□□□□□ -0.19
Rnf43-201ENSMUST00000040089 Pds5bQ4VA53 1446 aaKnown RBP13.86□□□□□ -0.19
Rnf43-201ENSMUST00000040089 Cep164Q5DU05 1446 aa13.85□□□□□ -0.19
Rnf43-201ENSMUST00000040089 Rsf1E9PWW9 1441 aaKnown RBP13.85□□□□□ -0.19
Rnf43-201ENSMUST00000040089 Fam50aQ9WV03 339 aaKnown RBP13.85□□□□□ -0.19
Rnf43-201ENSMUST00000040089 Crybg2B7ZCC2 1516 aa13.84□□□□□ -0.19
Rnf43-201ENSMUST00000040089 Smarca2Q6DIC0 1577 aa13.84□□□□□ -0.19
Rnf43-201ENSMUST00000040089 Ercc6F8VPZ5 1481 aa13.84□□□□□ -0.19
Rnf43-201ENSMUST00000040089 Mier1Q5UAK0 511 aa13.82□□□□□ -0.2
Rnf43-201ENSMUST00000040089 Ifnlr1Q8CGK5 535 aa13.82□□□□□ -0.2
Rnf43-201ENSMUST00000040089 CftrP26361 1476 aa13.79□□□□□ -0.2
Rnf43-201ENSMUST00000040089 NefmP08553 848 aa13.79□□□□□ -0.2
Rnf43-201ENSMUST00000040089 Fkbp15Q6P9Q6 1216 aaKnown RBP13.79□□□□□ -0.2
Rnf43-201ENSMUST00000040089 Ccdc88bQ4QRL3 1481 aa13.79□□□□□ -0.2
Rnf43-201ENSMUST00000040089 Synj1Q8CHC4 1574 aa13.74□□□□□ -0.21
Rnf43-201ENSMUST00000040089 BicraF8VPZ9 1578 aa13.71□□□□□ -0.21
Rnf43-201ENSMUST00000040089 Atad2bE9Q166 1460 aaKnown RBP13.7□□□□□ -0.22
Rnf43-201ENSMUST00000040089 CenpbP27790 599 aa13.67□□□□□ -0.22
Rnf43-201ENSMUST00000040089 Zbtb7cQ8VCZ7 619 aa13.67□□□□□ -0.22
Rnf43-201ENSMUST00000040089 Clip1Q922J3 1391 aa13.66□□□□□ -0.22
Rnf43-201ENSMUST00000040089 Myt1Q8CFC2 1127 aa13.65□□□□□ -0.22
Rnf43-201ENSMUST00000040089 Smarca4Q3TKT4 1613 aaKnown RBP13.65□□□□□ -0.22
Rnf43-201ENSMUST00000040089 Sall2Q9QX96 1004 aa13.62□□□□□ -0.23
Rnf43-201ENSMUST00000040089 Pelp1Q9DBD5 1123 aaKnown RBP13.61□□□□□ -0.23
Rnf43-201ENSMUST00000040089 1700123L14RikQ3V2K7 440 aa13.61□□□□□ -0.23
Rnf43-201ENSMUST00000040089 Anks4bQ8K3X6 423 aa13.61□□□□□ -0.23
Rnf43-201ENSMUST00000040089 Dnajc5bQ9CQ94 199 aa13.59□□□□□ -0.23
Rnf43-201ENSMUST00000040089 Csrnp3P59055 597 aa13.58□□□□□ -0.24
Rnf43-201ENSMUST00000040089 Iqgap2Q3UQ44 1575 aa13.56□□□□□ -0.24
Rnf43-201ENSMUST00000040089 Ccdc18Q640L5 1455 aa13.56□□□□□ -0.24
Rnf43-201ENSMUST00000040089 Eid3Q3V124 375 aa13.55□□□□□ -0.24
Rnf43-201ENSMUST00000040089 Cux2P70298 1426 aa13.55□□□□□ -0.24
Rnf43-201ENSMUST00000040089 Phldb1Q6PDH0 1371 aaKnown RBP13.53□□□□□ -0.24
Rnf43-201ENSMUST00000040089 Cdk11bP24788 784 aaKnown RBP13.53□□□□□ -0.24
Rnf43-201ENSMUST00000040089 Nop58Q6DFW4 536 aaKnown RBP13.5□□□□□ -0.25
Rnf43-201ENSMUST00000040089 Setd5Q5XJV7 1441 aa13.49□□□□□ -0.25
Rnf43-201ENSMUST00000040089 Gm38655A0A286YDK6 273 aa13.47□□□□□ -0.25
Rnf43-201ENSMUST00000040089 Fmn1Q05860 1466 aa13.47□□□□□ -0.25
Rnf43-201ENSMUST00000040089 Slc24a1Q91WD8 1130 aa13.46□□□□□ -0.25
Rnf43-201ENSMUST00000040089 Mapk8ip2Q9ERE9 830 aa13.46□□□□□ -0.26
Rnf43-201ENSMUST00000040089 Cttnbp2B9EJA2 1648 aa13.45□□□□□ -0.26
Rnf43-201ENSMUST00000040089 Arhgap27A2AB59 869 aa13.44□□□□□ -0.26
Rnf43-201ENSMUST00000040089 Plppr3Q7TPB0 716 aa13.44□□□□□ -0.26
Rnf43-201ENSMUST00000040089 BlmO88700 1416 aa13.43□□□□□ -0.26
Rnf43-201ENSMUST00000040089 Chic2Q9D9G3 165 aa13.43□□□□□ -0.26
Rnf43-201ENSMUST00000040089 Hnrnpul2Q00PI9 745 aaKnown RBP13.42□□□□□ -0.26
Rnf43-201ENSMUST00000040089 Aplp2Q06335 707 aa13.42□□□□□ -0.26
Rnf43-201ENSMUST00000040089 Aebp2Q9Z248 504 aaKnown RBP13.39□□□□□ -0.27
Rnf43-201ENSMUST00000040089 TonslQ6NZL6 1363 aa13.39□□□□□ -0.27
Rnf43-201ENSMUST00000040089 NclP09405 707 aaKnown RBP13.37□□□□□ -0.27
Rnf43-201ENSMUST00000040089 Frmpd1A2AKB4 1549 aa13.37□□□□□ -0.27
Rnf43-201ENSMUST00000040089 Cep162Q6ZQ06 1403 aa13.34□□□□□ -0.27
Rnf43-201ENSMUST00000040089 Rapgef2Q8CHG7 1496 aa13.33□□□□□ -0.28
Rnf43-201ENSMUST00000040089 LrpprcQ6PB66 1392 aaKnown RBP13.3□□□□□ -0.28
Rnf43-201ENSMUST00000040089 ClspnQ80YR7 1315 aa13.29□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms