RNA–Protein interactions for RNA: ENSMUST00000039438.8

Ntrk3-202, Transcript of NT-3 growth factor receptor, mousemouse

TSL 1 (best) BASIC

Gene Ntrk3, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ntrk3-202ENSMUST00000039438 Gm35339A0A140LHH9 1649 aa12.85□□□□□ -0.35
Ntrk3-202ENSMUST00000039438 NischQ80TM9 1593 aa12.2□□□□□ -0.46
Ntrk3-202ENSMUST00000039438 Abcc9P70170 1546 aa12.11□□□□□ -0.47
Ntrk3-202ENSMUST00000039438 Rhox8Q6VSS7 320 aa12.07□□□□□ -0.48
Ntrk3-202ENSMUST00000039438 Abcc8B2RUS7 1588 aa11.75□□□□□ -0.53
Ntrk3-202ENSMUST00000039438 ScribQ80U72 1612 aa11.35□□□□□ -0.59
Ntrk3-202ENSMUST00000039438 Rpgrip1Q9EPQ2 1331 aa11.33□□□□□ -0.6
Ntrk3-202ENSMUST00000039438 Dcaf1Q80TR8 1506 aa11.13□□□□□ -0.63
Ntrk3-202ENSMUST00000039438 Ccdc180J3QNE4 1664 aa11.13□□□□□ -0.63
Ntrk3-202ENSMUST00000039438 NacadQ5SWP3 1504 aa11.13□□□□□ -0.63
Ntrk3-202ENSMUST00000039438 Ccdc136Q3TVA9 1136 aa11.13□□□□□ -0.63
Ntrk3-202ENSMUST00000039438 Ehmt2Q9Z148 1263 aaKnown RBP11.12□□□□□ -0.63
Ntrk3-202ENSMUST00000039438 Kdm5dQ62240 1548 aa11.02□□□□□ -0.65
Ntrk3-202ENSMUST00000039438 Dnajc5bQ9CQ94 199 aa10.97□□□□□ -0.65
Ntrk3-202ENSMUST00000039438 Las1lA2BE28 776 aaKnown RBP10.94□□□□□ -0.66
Ntrk3-202ENSMUST00000039438 Ube2uB1AUC4 352 aa10.86□□□□□ -0.67
Ntrk3-202ENSMUST00000039438 Pcgf6Q99NA9 353 aa10.84□□□□□ -0.67
Ntrk3-202ENSMUST00000039438 Sycp2Q9CUU3 1500 aa10.83□□□□□ -0.68
Ntrk3-202ENSMUST00000039438 Acin1Q9JIX8 1338 aaKnown RBP10.73□□□□□ -0.69
Ntrk3-202ENSMUST00000039438 Zcchc6Q5BLK4 1491 aaKnown RBP10.71□□□□□ -0.69
Ntrk3-202ENSMUST00000039438 Pds5bQ4VA53 1446 aaKnown RBP10.69□□□□□ -0.7
Ntrk3-202ENSMUST00000039438 Cngb1E1AZ71 1325 aa10.68□□□□□ -0.7
Ntrk3-202ENSMUST00000039438 Trim41Q5NCC3 630 aa10.67□□□□□ -0.7
Ntrk3-202ENSMUST00000039438 CenpbP27790 599 aa10.63□□□□□ -0.71
Ntrk3-202ENSMUST00000039438 Rb1cc1Q9ESK9 1588 aa10.63□□□□□ -0.71
Ntrk3-202ENSMUST00000039438 Gab3Q8BSM5 595 aa10.62□□□□□ -0.71
Ntrk3-202ENSMUST00000039438 DiexfQ8BTT6 772 aaKnown RBP10.61□□□□□ -0.71
Ntrk3-202ENSMUST00000039438 Crybg2B7ZCC2 1516 aa10.61□□□□□ -0.71
Ntrk3-202ENSMUST00000039438 Esf1Q3V1V3 845 aaKnown RBP10.6□□□□□ -0.71
Ntrk3-202ENSMUST00000039438 Zeb1Q64318 1117 aa10.59□□□□□ -0.71
Ntrk3-202ENSMUST00000039438 Ercc6F8VPZ5 1481 aa10.58□□□□□ -0.72
Ntrk3-202ENSMUST00000039438 BicraF8VPZ9 1578 aa10.57□□□□□ -0.72
Ntrk3-202ENSMUST00000039438 Ubl4bQ9CQ84 188 aa10.57□□□□□ -0.72
Ntrk3-202ENSMUST00000039438 Rtl1Q7M732 1744 aa10.53□□□□□ -0.72
Ntrk3-202ENSMUST00000039438 Supt5hO55201 1082 aaKnown RBP10.51□□□□□ -0.73
Ntrk3-202ENSMUST00000039438 Baz1aO88379 1555 aa10.48□□□□□ -0.73
Ntrk3-202ENSMUST00000039438 Neurod1Q60867 357 aa10.47□□□□□ -0.73
Ntrk3-202ENSMUST00000039438 Atad2bE9Q166 1460 aaKnown RBP10.46□□□□□ -0.73
Ntrk3-202ENSMUST00000039438 Myt1Q8CFC2 1127 aa10.46□□□□□ -0.74
Ntrk3-202ENSMUST00000039438 Amer1Q7TS75 1132 aa10.4□□□□□ -0.75
Ntrk3-202ENSMUST00000039438 Wdr66E9Q743 1299 aa10.38□□□□□ -0.75
Ntrk3-202ENSMUST00000039438 Cc2d2aQ8CFW7 1633 aa10.36□□□□□ -0.75
Ntrk3-202ENSMUST00000039438 Smarca2Q6DIC0 1577 aa10.35□□□□□ -0.75
Ntrk3-202ENSMUST00000039438 Phldb1Q6PDH0 1371 aaKnown RBP10.33□□□□□ -0.76
Ntrk3-202ENSMUST00000039438 Myt1lP97500 1187 aa10.29□□□□□ -0.76
Ntrk3-202ENSMUST00000039438 Thoc2B1AZI6 1594 aaKnown RBP10.29□□□□□ -0.76
Ntrk3-202ENSMUST00000039438 Il27Q8K3I6 234 aa10.29□□□□□ -0.76
Ntrk3-202ENSMUST00000039438 Csrnp3P59055 597 aa10.27□□□□□ -0.77
Ntrk3-202ENSMUST00000039438 Npm1Q61937 292 aaKnown RBP10.26□□□□□ -0.77
Ntrk3-202ENSMUST00000039438 Gm38655A0A286YDK6 273 aa10.25□□□□□ -0.77
Ntrk3-202ENSMUST00000039438 1700123L14RikQ3V2K7 440 aa10.24□□□□□ -0.77
Ntrk3-202ENSMUST00000039438 Smarca4Q3TKT4 1613 aaKnown RBP10.22□□□□□ -0.77
Ntrk3-202ENSMUST00000039438 Pelp1Q9DBD5 1123 aaKnown RBP10.22□□□□□ -0.77
Ntrk3-202ENSMUST00000039438 Iqgap2Q3UQ44 1575 aa10.22□□□□□ -0.77
Ntrk3-202ENSMUST00000039438 HrcG5E8J6 738 aa10.21□□□□□ -0.78
Ntrk3-202ENSMUST00000039438 Npm2Q80W85 207 aa10.2□□□□□ -0.78
Ntrk3-202ENSMUST00000039438 Ttbk1Q6PCN3 1308 aa10.2□□□□□ -0.78
Ntrk3-202ENSMUST00000039438 Dnajc5P60904 198 aa10.2□□□□□ -0.78
Ntrk3-202ENSMUST00000039438 Cecr2E9Q2Z1 1453 aa10.19□□□□□ -0.78
Ntrk3-202ENSMUST00000039438 Chic1Q8CBW7 227 aa10.19□□□□□ -0.78
Ntrk3-202ENSMUST00000039438 Bcl11aQ9QYE3 773 aa10.16□□□□□ -0.78
Ntrk3-202ENSMUST00000039438 Mrc2Q64449 1479 aa10.13□□□□□ -0.79
Ntrk3-202ENSMUST00000039438 Frmpd1A2AKB4 1549 aa10.13□□□□□ -0.79
Ntrk3-202ENSMUST00000039438 Cdk11bP24788 784 aaKnown RBP10.12□□□□□ -0.79
Ntrk3-202ENSMUST00000039438 Ppargc1bQ8VHJ7 1014 aa10.11□□□□□ -0.79
Ntrk3-202ENSMUST00000039438 Fam135aQ6NS59 1506 aa10.1□□□□□ -0.79
Ntrk3-202ENSMUST00000039438 Kif15Q6P9L6 1387 aa10.09□□□□□ -0.79
Ntrk3-202ENSMUST00000039438 Wdr62Q3U3T8 1523 aa10.08□□□□□ -0.8
Ntrk3-202ENSMUST00000039438 UbtfP25976 765 aaKnown RBP10.07□□□□□ -0.8
Ntrk3-202ENSMUST00000039438 CatipB9EKE5 520 aa10.07□□□□□ -0.8
Ntrk3-202ENSMUST00000039438 Brd4Q9ESU6 1400 aaKnown RBP10.06□□□□□ -0.8
Ntrk3-202ENSMUST00000039438 Rsf1E9PWW9 1441 aaKnown RBP10.04□□□□□ -0.8
Ntrk3-202ENSMUST00000039438 Nop58Q6DFW4 536 aaKnown RBP10.04□□□□□ -0.8
Ntrk3-202ENSMUST00000039438 Anks4bQ8K3X6 423 aa10.03□□□□□ -0.8
Ntrk3-202ENSMUST00000039438 Cux2P70298 1426 aa10.02□□□□□ -0.8
Ntrk3-202ENSMUST00000039438 Unc13aQ4KUS2 1712 aa10.02□□□□□ -0.81
Ntrk3-202ENSMUST00000039438 Ap3b1Q9Z1T1 1105 aa10□□□□□ -0.81
Ntrk3-202ENSMUST00000039438 Pabpn1Q8CCS6 302 aaKnown RBP10□□□□□ -0.81
Ntrk3-202ENSMUST00000039438 Aplp2Q06335 707 aa9.99□□□□□ -0.81
Ntrk3-202ENSMUST00000039438 NefmP08553 848 aa9.97□□□□□ -0.81
Ntrk3-202ENSMUST00000039438 Sall2Q9QX96 1004 aa9.97□□□□□ -0.81
Ntrk3-202ENSMUST00000039438 Baz1bQ9Z277 1479 aa9.95□□□□□ -0.82
Ntrk3-202ENSMUST00000039438 CftrP26361 1476 aa9.94□□□□□ -0.82
Ntrk3-202ENSMUST00000039438 Cep164Q5DU05 1446 aa9.93□□□□□ -0.82
Ntrk3-202ENSMUST00000039438 PrkcshO08795 521 aa9.92□□□□□ -0.82
Ntrk3-202ENSMUST00000039438 Cttnbp2B9EJA2 1648 aa9.89□□□□□ -0.83
Ntrk3-202ENSMUST00000039438 Top2bQ64511 1612 aa9.88□□□□□ -0.83
Ntrk3-202ENSMUST00000039438 Mapk8ip2Q9ERE9 830 aa9.86□□□□□ -0.83
Ntrk3-202ENSMUST00000039438 Ifnlr1Q8CGK5 535 aa9.86□□□□□ -0.83
Ntrk3-202ENSMUST00000039438 Fam71e1A1L3C1 212 aa9.85□□□□□ -0.83
Ntrk3-202ENSMUST00000039438 Plekhg3Q4VAC9 1341 aa9.85□□□□□ -0.83
Ntrk3-202ENSMUST00000039438 Synj1Q8CHC4 1574 aa9.85□□□□□ -0.83
Ntrk3-202ENSMUST00000039438 Ccdc88bQ4QRL3 1481 aa9.83□□□□□ -0.84
Ntrk3-202ENSMUST00000039438 Ccdc18Q640L5 1455 aa9.83□□□□□ -0.84
Ntrk3-202ENSMUST00000039438 Plppr3Q7TPB0 716 aa9.82□□□□□ -0.84
Ntrk3-202ENSMUST00000039438 Urb2E9Q7L1 1524 aaKnown RBP9.8□□□□□ -0.84
Ntrk3-202ENSMUST00000039438 ArxO35085 564 aa9.8□□□□□ -0.84
Ntrk3-202ENSMUST00000039438 Mier1Q5UAK0 511 aa9.8□□□□□ -0.84
Ntrk3-202ENSMUST00000039438 Dhx29Q6PGC1 1365 aaKnown RBP9.79□□□□□ -0.84
Ntrk3-202ENSMUST00000039438 TnnQ80Z71 1560 aa9.79□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms