RNA–Protein interactions for RNA: ENSMUST00000036999.9

Clip2-201, Transcript of CAP-Gly domain-containing linker protein 2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clip2, Length 4,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2-201ENSMUST00000036999 Rhox8Q6VSS7 320 aa25.28■■□□□ 1.64
Clip2-201ENSMUST00000036999 Rpgrip1Q9EPQ2 1331 aa23.74■■□□□ 1.39
Clip2-201ENSMUST00000036999 Ehmt2Q9Z148 1263 aaKnown RBP23.06■■□□□ 1.28
Clip2-201ENSMUST00000036999 NischQ80TM9 1593 aa23.05■■□□□ 1.28
Clip2-201ENSMUST00000036999 Esf1Q3V1V3 845 aaKnown RBP22.54■■□□□ 1.2
Clip2-201ENSMUST00000036999 Ccdc136Q3TVA9 1136 aa22.51■■□□□ 1.19
Clip2-201ENSMUST00000036999 Las1lA2BE28 776 aaKnown RBP22.43■■□□□ 1.18
Clip2-201ENSMUST00000036999 Trim41Q5NCC3 630 aa22.36■■□□□ 1.17
Clip2-201ENSMUST00000036999 Cngb1E1AZ71 1325 aa22.29■■□□□ 1.16
Clip2-201ENSMUST00000036999 Acin1Q9JIX8 1338 aaKnown RBP22.28■■□□□ 1.16
Clip2-201ENSMUST00000036999 Zeb1Q64318 1117 aa22.13■■□□□ 1.13
Clip2-201ENSMUST00000036999 Wdr66E9Q743 1299 aa22.07■■□□□ 1.12
Clip2-201ENSMUST00000036999 Gab3Q8BSM5 595 aa21.94■■□□□ 1.1
Clip2-201ENSMUST00000036999 Ccdc180J3QNE4 1664 aa21.86■■□□□ 1.09
Clip2-201ENSMUST00000036999 Npm2Q80W85 207 aa21.85■■□□□ 1.09
Clip2-201ENSMUST00000036999 Pcgf6Q99NA9 353 aa21.67■■□□□ 1.06
Clip2-201ENSMUST00000036999 HrcG5E8J6 738 aa21.66■■□□□ 1.06
Clip2-201ENSMUST00000036999 NefmP08553 848 aa21.61■■□□□ 1.05
Clip2-201ENSMUST00000036999 Rtl1Q7M732 1744 aa21.61■■□□□ 1.05
Clip2-201ENSMUST00000036999 Abcc9P70170 1546 aa21.6■■□□□ 1.05
Clip2-201ENSMUST00000036999 Ube2uB1AUC4 352 aa21.55■■□□□ 1.04
Clip2-201ENSMUST00000036999 Myt1lP97500 1187 aa21.51■■□□□ 1.03
Clip2-201ENSMUST00000036999 CenpbP27790 599 aa21.45■■□□□ 1.02
Clip2-201ENSMUST00000036999 Pelp1Q9DBD5 1123 aaKnown RBP21.42■■□□□ 1.02
Clip2-201ENSMUST00000036999 UbtfP25976 765 aaKnown RBP21.29■■□□□ 1
Clip2-201ENSMUST00000036999 Zcchc6Q5BLK4 1491 aaKnown RBP21.29■■□□□ 1
Clip2-201ENSMUST00000036999 Supt5hO55201 1082 aaKnown RBP21.2■□□□□ 0.98
Clip2-201ENSMUST00000036999 Abcc8B2RUS7 1588 aa21.18■□□□□ 0.98
Clip2-201ENSMUST00000036999 Il27Q8K3I6 234 aa21.16■□□□□ 0.98
Clip2-201ENSMUST00000036999 Gm35339A0A140LHH9 1649 aa21.14■□□□□ 0.98
Clip2-201ENSMUST00000036999 Cdk11bP24788 784 aaKnown RBP21.12■□□□□ 0.97
Clip2-201ENSMUST00000036999 Stra8P70278 393 aa20.94■□□□□ 0.94
Clip2-201ENSMUST00000036999 Nop58Q6DFW4 536 aaKnown RBP20.92■□□□□ 0.94
Clip2-201ENSMUST00000036999 Myt1Q8CFC2 1127 aa20.91■□□□□ 0.94
Clip2-201ENSMUST00000036999 Mier1Q5UAK0 511 aa20.75■□□□□ 0.91
Clip2-201ENSMUST00000036999 Ppargc1bQ8VHJ7 1014 aa20.75■□□□□ 0.91
Clip2-201ENSMUST00000036999 Slc24a1Q91WD8 1130 aa20.73■□□□□ 0.91
Clip2-201ENSMUST00000036999 Tnnt3Q9QZ47 272 aa20.69■□□□□ 0.9
Clip2-201ENSMUST00000036999 Npm1Q61937 292 aaKnown RBP20.67■□□□□ 0.9
Clip2-201ENSMUST00000036999 Dcaf1Q80TR8 1506 aa20.63■□□□□ 0.89
Clip2-201ENSMUST00000036999 Neurod1Q60867 357 aa20.62■□□□□ 0.89
Clip2-201ENSMUST00000036999 TonslQ6NZL6 1363 aa20.59■□□□□ 0.89
Clip2-201ENSMUST00000036999 Amer1Q7TS75 1132 aa20.55■□□□□ 0.88
Clip2-201ENSMUST00000036999 NclP09405 707 aaKnown RBP20.45■□□□□ 0.87
Clip2-201ENSMUST00000036999 Brd4Q9ESU6 1400 aaKnown RBP20.44■□□□□ 0.86
Clip2-201ENSMUST00000036999 ClspnQ80YR7 1315 aa20.44■□□□□ 0.86
Clip2-201ENSMUST00000036999 Ap3b1Q9Z1T1 1105 aa20.43■□□□□ 0.86
Clip2-201ENSMUST00000036999 Sall2Q9QX96 1004 aa20.41■□□□□ 0.86
Clip2-201ENSMUST00000036999 Fam50aQ9WV03 339 aaKnown RBP20.41■□□□□ 0.86
Clip2-201ENSMUST00000036999 Anks4bQ8K3X6 423 aa20.34■□□□□ 0.85
Clip2-201ENSMUST00000036999 Ttbk1Q6PCN3 1308 aa20.32■□□□□ 0.84
Clip2-201ENSMUST00000036999 NrdcQ8BHG1 1161 aa20.3■□□□□ 0.84
Clip2-201ENSMUST00000036999 Cep164Q5DU05 1446 aa20.29■□□□□ 0.84
Clip2-201ENSMUST00000036999 Csrnp3P59055 597 aa20.27■□□□□ 0.83
Clip2-201ENSMUST00000036999 NacadQ5SWP3 1504 aa20.26■□□□□ 0.83
Clip2-201ENSMUST00000036999 Eif5bQ05D44 1216 aaKnown RBP20.25■□□□□ 0.83
Clip2-201ENSMUST00000036999 Rb1cc1Q9ESK9 1588 aa20.23■□□□□ 0.83
Clip2-201ENSMUST00000036999 Anp32bQ9EST5 272 aaKnown RBP20.17■□□□□ 0.82
Clip2-201ENSMUST00000036999 Rtl5Q5DTT4 599 aa20.17■□□□□ 0.82
Clip2-201ENSMUST00000036999 Plekhg3Q4VAC9 1341 aa20.15■□□□□ 0.82
Clip2-201ENSMUST00000036999 Ubl4bQ9CQ84 188 aa20.15■□□□□ 0.82
Clip2-201ENSMUST00000036999 Chic1Q8CBW7 227 aa20.14■□□□□ 0.82
Clip2-201ENSMUST00000036999 Aplp2Q06335 707 aa20.12■□□□□ 0.81
Clip2-201ENSMUST00000036999 Gm38655A0A286YDK6 273 aa20.12■□□□□ 0.81
Clip2-201ENSMUST00000036999 Os9Q8K2C7 672 aa20.09■□□□□ 0.81
Clip2-201ENSMUST00000036999 4933416C03RikQ3V063 378 aa20.09■□□□□ 0.81
Clip2-201ENSMUST00000036999 Anp32aO35381 247 aa20.07■□□□□ 0.8
Clip2-201ENSMUST00000036999 DiexfQ8BTT6 772 aaKnown RBP20.06■□□□□ 0.8
Clip2-201ENSMUST00000036999 NeflP08551 543 aa20.02■□□□□ 0.8
Clip2-201ENSMUST00000036999 Lmod2Q3UHZ5 550 aa19.99■□□□□ 0.79
Clip2-201ENSMUST00000036999 Eid3Q3V124 375 aa19.95■□□□□ 0.78
Clip2-201ENSMUST00000036999 Mapk8ip2Q9ERE9 830 aa19.93■□□□□ 0.78
Clip2-201ENSMUST00000036999 1700123L14RikQ3V2K7 440 aa19.89■□□□□ 0.77
Clip2-201ENSMUST00000036999 Clip1Q922J3 1391 aa19.86■□□□□ 0.77
Clip2-201ENSMUST00000036999 Baz1aO88379 1555 aa19.84■□□□□ 0.77
Clip2-201ENSMUST00000036999 Ifnlr1Q8CGK5 535 aa19.82■□□□□ 0.76
Clip2-201ENSMUST00000036999 Hdac5Q9Z2V6 1113 aa19.82■□□□□ 0.76
Clip2-201ENSMUST00000036999 Hnrnpul2Q00PI9 745 aaKnown RBP19.81■□□□□ 0.76
Clip2-201ENSMUST00000036999 Gm13697A2AK42 830 aa19.8■□□□□ 0.76
Clip2-201ENSMUST00000036999 Aebp2Q9Z248 504 aaKnown RBP19.75■□□□□ 0.75
Clip2-201ENSMUST00000036999 Zbtb7cQ8VCZ7 619 aa19.75■□□□□ 0.75
Clip2-201ENSMUST00000036999 Ercc6F8VPZ5 1481 aa19.73■□□□□ 0.75
Clip2-201ENSMUST00000036999 Rsf1E9PWW9 1441 aaKnown RBP19.72■□□□□ 0.75
Clip2-201ENSMUST00000036999 Fkbp15Q6P9Q6 1216 aaKnown RBP19.7■□□□□ 0.74
Clip2-201ENSMUST00000036999 Calr4Q3TQS0 420 aa19.66■□□□□ 0.74
Clip2-201ENSMUST00000036999 Kdm5dQ62240 1548 aa19.64■□□□□ 0.73
Clip2-201ENSMUST00000036999 Ccer2J3QPU5 274 aa19.63■□□□□ 0.73
Clip2-201ENSMUST00000036999 Kif15Q6P9L6 1387 aa19.63■□□□□ 0.73
Clip2-201ENSMUST00000036999 DaxxO35613 739 aa19.58■□□□□ 0.73
Clip2-201ENSMUST00000036999 Golga3P55937 1487 aa19.56■□□□□ 0.72
Clip2-201ENSMUST00000036999 Ppp4r2Q0VGB7 417 aa19.55■□□□□ 0.72
Clip2-201ENSMUST00000036999 Erich6D3Z6S9 713 aa19.53■□□□□ 0.72
Clip2-201ENSMUST00000036999 Ccdc18Q640L5 1455 aa19.52■□□□□ 0.72
Clip2-201ENSMUST00000036999 Pds5bQ4VA53 1446 aaKnown RBP19.51■□□□□ 0.71
Clip2-201ENSMUST00000036999 Fam71e1A1L3C1 212 aa19.48■□□□□ 0.71
Clip2-201ENSMUST00000036999 Atp1b4Q99ME6 356 aa19.47■□□□□ 0.71
Clip2-201ENSMUST00000036999 Wdr43Q6ZQL4 677 aaKnown RBP19.45■□□□□ 0.7
Clip2-201ENSMUST00000036999 4930567H17RikQ3V0K5 233 aa19.45■□□□□ 0.7
Clip2-201ENSMUST00000036999 Clstn2Q9ER65 966 aa19.45■□□□□ 0.7
Clip2-201ENSMUST00000036999 Gm13695A2AK44 830 aa19.44■□□□□ 0.7
Retrieved 100 of 22,080 RNA–protein pairs in 78.3 ms